BLASTX nr result

ID: Cnidium21_contig00000404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000404
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556552.1| PREDICTED: protoheme IX farnesyltransferase,...   475   e-131
ref|XP_004133949.1| PREDICTED: protoheme IX farnesyltransferase,...   468   e-129
ref|XP_002265039.1| PREDICTED: protoheme IX farnesyltransferase,...   462   e-128
ref|XP_003592792.1| Protoheme IX farnesyltransferase [Medicago t...   455   e-125
ref|XP_002525009.1| protoheme IX farnesyltransferase, putative [...   438   e-120

>ref|XP_003556552.1| PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like
            [Glycine max]
          Length = 411

 Score =  475 bits (1222), Expect = e-131
 Identities = 240/348 (68%), Positives = 273/348 (78%), Gaps = 3/348 (0%)
 Frame = -1

Query: 1226 SSSEGFPVAPISK---TTSLLSAARHYGRCYWELSKARLSMLVVATSGAGYVLGSGGAID 1056
            +S+  F ++  S    TT  +S  RHYGRCYWELSKARLSMLVVATSG G+VLGSG A+D
Sbjct: 36   ASATSFDISSASASKATTDFVSLTRHYGRCYWELSKARLSMLVVATSGTGFVLGSGSAVD 95

Query: 1055 YLGLSYTCXXXXXXXXXANSLNQIFEIKNDAKMKRTMRRPLPSGRITLPHAVMWASSVGV 876
               LS TC         ANSLNQ+FEI NDAKMKRT RRPLPSGRIT+PHAV WASSVG+
Sbjct: 96   LSALSCTCLGTMMVAASANSLNQVFEINNDAKMKRTSRRPLPSGRITIPHAVGWASSVGL 155

Query: 875  AGTVLLAWKANMLAAGLGASNLVLYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASG 696
            AGT LLA + NMLAAGL ASNL+LYAFVYTPLKQIHP+NTWVGAVVGAIPPLLGWAAAS 
Sbjct: 156  AGTALLATQTNMLAAGLAASNLILYAFVYTPLKQIHPINTWVGAVVGAIPPLLGWAAASN 215

Query: 695  SVSLNGMILPAALYFWQIPHFMALAYLCRKDYAAGGFKMFSLADPSGHRTALVALRNCLY 516
             +SLNGMILPAALYFWQIPHFMALAYLCR DYAAGGFKM+SLAD SGHRTALVALRN +Y
Sbjct: 216  DISLNGMILPAALYFWQIPHFMALAYLCRDDYAAGGFKMYSLADASGHRTALVALRNSIY 275

Query: 515  LLPLGYLAYDWGITSGWFCLESXXXXXXXXXXXTSFFVHRTTETARRMFHASLLYLPVFM 336
            L+PLG+LAYDWG+TSGWFCLES            SF+ +RT E ARRMFHASLLYLPVFM
Sbjct: 276  LIPLGFLAYDWGLTSGWFCLESAALTLAISAAAFSFYRNRTKEKARRMFHASLLYLPVFM 335

Query: 335  SGIMFHRLSDNKEHVSVKNSKARVGYTLTSEAPIKEFGNSDQRKKAKR 192
            SG++ HR S+N++ +  K +K  V    ++E+   +  N DQ  KA+R
Sbjct: 336  SGLLIHRRSENEQFLEDK-AKGFVKSASSTESSELDDDNGDQNIKARR 382


>ref|XP_004133949.1| PREDICTED: protoheme IX farnesyltransferase, mitochondrial-like
            [Cucumis sativus] gi|449515420|ref|XP_004164747.1|
            PREDICTED: protoheme IX farnesyltransferase,
            mitochondrial-like [Cucumis sativus]
          Length = 448

 Score =  468 bits (1203), Expect = e-129
 Identities = 229/346 (66%), Positives = 269/346 (77%), Gaps = 1/346 (0%)
 Frame = -1

Query: 1238 YFNISSSEGFPVAP-ISKTTSLLSAARHYGRCYWELSKARLSMLVVATSGAGYVLGSGGA 1062
            + +++       AP +S+   ++  ARHYG CYWELSKARLSMLVVATSG G+VLGSG  
Sbjct: 75   FSSVADPSSLASAPAVSRVREVVDLARHYGSCYWELSKARLSMLVVATSGTGFVLGSGST 134

Query: 1061 IDYLGLSYTCXXXXXXXXXANSLNQIFEIKNDAKMKRTMRRPLPSGRITLPHAVMWASSV 882
            +D  GL +TC         ANSLNQ+FEIKNDAKMKRT RRPLPSGRIT+PHA  WA+SV
Sbjct: 135  MDLAGLCWTCAGTMMVAASANSLNQVFEIKNDAKMKRTRRRPLPSGRITVPHAFTWATSV 194

Query: 881  GVAGTVLLAWKANMLAAGLGASNLVLYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAA 702
            G+AGT +LA K N+LAAGL ASNL+LYAFVYTPLKQIHPVNTWVGA+VGAIPPLLGWAAA
Sbjct: 195  GLAGTAMLAAKTNILAAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWAAA 254

Query: 701  SGSVSLNGMILPAALYFWQIPHFMALAYLCRKDYAAGGFKMFSLADPSGHRTALVALRNC 522
            SG +SLN MILPAALYFWQIPHFMALAYLCR DYAAGG+KMFSLAD SG RTA VALRNC
Sbjct: 255  SGQISLNAMILPAALYFWQIPHFMALAYLCRDDYAAGGYKMFSLADASGQRTAAVALRNC 314

Query: 521  LYLLPLGYLAYDWGITSGWFCLESXXXXXXXXXXXTSFFVHRTTETARRMFHASLLYLPV 342
            +YL+PLG+LAYDWGITSGWFCLES            SF+ H T + ARRMFHASLLYLPV
Sbjct: 315  VYLVPLGFLAYDWGITSGWFCLESSILTLAISATAFSFYRHCTMQKARRMFHASLLYLPV 374

Query: 341  FMSGIMFHRLSDNKEHVSVKNSKARVGYTLTSEAPIKEFGNSDQRK 204
            FMSG++FHRLSDN++ +   +S+  +   +  +    +   ++QR+
Sbjct: 375  FMSGLLFHRLSDNEQTMEEDSSERMLDGLVQEDRYTAQENKTEQRQ 420


>ref|XP_002265039.1| PREDICTED: protoheme IX farnesyltransferase, mitochondrial [Vitis
            vinifera] gi|297734684|emb|CBI16735.3| unnamed protein
            product [Vitis vinifera]
          Length = 422

 Score =  462 bits (1189), Expect = e-128
 Identities = 236/352 (67%), Positives = 272/352 (77%), Gaps = 5/352 (1%)
 Frame = -1

Query: 1235 FNISSSEGFPVAPISKTTSL-----LSAARHYGRCYWELSKARLSMLVVATSGAGYVLGS 1071
            F+I+S     V     TTSL     +  ARHYGRCY ELSKARLSMLVVATSG G+VLGS
Sbjct: 40   FSIASDGTRTVGSTINTTSLSARDAVDLARHYGRCYCELSKARLSMLVVATSGTGFVLGS 99

Query: 1070 GGAIDYLGLSYTCXXXXXXXXXANSLNQIFEIKNDAKMKRTMRRPLPSGRITLPHAVMWA 891
            G  ID+ GL +TC         ANSLNQ+FEI NDAKMKRTMRRPLPSGR+++PHAV WA
Sbjct: 100  GNIIDFGGLFWTCAGTMMVAASANSLNQVFEINNDAKMKRTMRRPLPSGRLSIPHAVTWA 159

Query: 890  SSVGVAGTVLLAWKANMLAAGLGASNLVLYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGW 711
            SSVGVAGT +LA KANMLAAGL ASNL+LYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGW
Sbjct: 160  SSVGVAGTAILACKANMLAAGLAASNLLLYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGW 219

Query: 710  AAASGSVSLNGMILPAALYFWQIPHFMALAYLCRKDYAAGGFKMFSLADPSGHRTALVAL 531
            AAA+G VSLNGMILPAALYFWQIPHFMALAYLCR DYAAGG++M S AD SG RTA+VAL
Sbjct: 220  AAAAGQVSLNGMILPAALYFWQIPHFMALAYLCRDDYAAGGYRMLSFADASGRRTAVVAL 279

Query: 530  RNCLYLLPLGYLAYDWGITSGWFCLESXXXXXXXXXXXTSFFVHRTTETARRMFHASLLY 351
            RN LYL+PLG++AYDWG+TSGWFCLES            +F+  RT + ARRMFHASLLY
Sbjct: 280  RNSLYLIPLGFIAYDWGVTSGWFCLESSLLTLAISAAAFAFYRDRTKQKARRMFHASLLY 339

Query: 350  LPVFMSGIMFHRLSDNKEHVSVKNSKARVGYTLTSEAPIKEFGNSDQRKKAK 195
            LPVFMSG++ HR++DN++ +   NS+  V  + +S    +E  N   + KA+
Sbjct: 340  LPVFMSGLIVHRVTDNQQGLVQDNSEKTVELSSSSGTLEQENENVRSQNKAR 391


>ref|XP_003592792.1| Protoheme IX farnesyltransferase [Medicago truncatula]
            gi|355481840|gb|AES63043.1| Protoheme IX
            farnesyltransferase [Medicago truncatula]
          Length = 402

 Score =  455 bits (1171), Expect = e-125
 Identities = 226/345 (65%), Positives = 270/345 (78%)
 Frame = -1

Query: 1226 SSSEGFPVAPISKTTSLLSAARHYGRCYWELSKARLSMLVVATSGAGYVLGSGGAIDYLG 1047
            S+    P    SK+  L+S ARHYG CY +LSKARLS+LVVATSG G+VLGSGGA+D   
Sbjct: 32   STFSSSPSVSASKSNDLISLARHYGNCYSQLSKARLSLLVVATSGTGFVLGSGGAVDLSM 91

Query: 1046 LSYTCXXXXXXXXXANSLNQIFEIKNDAKMKRTMRRPLPSGRITLPHAVMWASSVGVAGT 867
            LSYTC         A++LNQ+FEIKNDA M+RT +RPLPSGRIT+PHAV WASSVG+AGT
Sbjct: 92   LSYTCLGTMMVAASASTLNQVFEIKNDAIMRRTSQRPLPSGRITVPHAVGWASSVGLAGT 151

Query: 866  VLLAWKANMLAAGLGASNLVLYAFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASGSVS 687
             LLA + NMLAAGL ASNLVLY+FVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASG +S
Sbjct: 152  ALLATQTNMLAAGLAASNLVLYSFVYTPLKQIHPVNTWVGAVVGAIPPLLGWAAASGDIS 211

Query: 686  LNGMILPAALYFWQIPHFMALAYLCRKDYAAGGFKMFSLADPSGHRTALVALRNCLYLLP 507
            LN +ILPAALYFWQIPHFMALAY+CR+DYAAGGFKM+SLADPSG +TA+VA+RN +YL+P
Sbjct: 212  LNSLILPAALYFWQIPHFMALAYMCREDYAAGGFKMYSLADPSGRKTAMVAMRNSIYLIP 271

Query: 506  LGYLAYDWGITSGWFCLESXXXXXXXXXXXTSFFVHRTTETARRMFHASLLYLPVFMSGI 327
            LG+LAYDWG+TSGWFCLES            SF+  RT E ARRMFHASLLYLPVFM+G+
Sbjct: 272  LGFLAYDWGVTSGWFCLESTALTLAISAAAFSFYRDRTKERARRMFHASLLYLPVFMAGL 331

Query: 326  MFHRLSDNKEHVSVKNSKARVGYTLTSEAPIKEFGNSDQRKKAKR 192
            + HR +DN+  + V N++  +    + E    +  N +Q+ K ++
Sbjct: 332  LIHRRTDNQHFLEV-NAEGFMKSPSSVETSEMDDKNGNQKIKGRQ 375


>ref|XP_002525009.1| protoheme IX farnesyltransferase, putative [Ricinus communis]
            gi|223535717|gb|EEF37381.1| protoheme IX
            farnesyltransferase, putative [Ricinus communis]
          Length = 333

 Score =  438 bits (1126), Expect = e-120
 Identities = 218/316 (68%), Positives = 250/316 (79%)
 Frame = -1

Query: 1115 MLVVATSGAGYVLGSGGAIDYLGLSYTCXXXXXXXXXANSLNQIFEIKNDAKMKRTMRRP 936
            MLVVATSG GYVLGSG A+D+ GL +TC         ANSLNQ+FEI ND+KMKRT  RP
Sbjct: 1    MLVVATSGTGYVLGSGNAVDFAGLCWTCAGTMMVAASANSLNQVFEINNDSKMKRTRLRP 60

Query: 935  LPSGRITLPHAVMWASSVGVAGTVLLAWKANMLAAGLGASNLVLYAFVYTPLKQIHPVNT 756
            LPSGR+T+PHAV WASSVG+AGT +LA KANMLAAGLGASNL+LYAF+YTPLKQIHPVNT
Sbjct: 61   LPSGRLTVPHAVTWASSVGLAGTAILASKANMLAAGLGASNLILYAFIYTPLKQIHPVNT 120

Query: 755  WVGAVVGAIPPLLGWAAASGSVSLNGMILPAALYFWQIPHFMALAYLCRKDYAAGGFKMF 576
            WVGAVVGAIPPLLGWAAASG VSLN MILPAALYFWQIPHFMALAYLCR DYAAGGFKMF
Sbjct: 121  WVGAVVGAIPPLLGWAAASGQVSLNAMILPAALYFWQIPHFMALAYLCRNDYAAGGFKMF 180

Query: 575  SLADPSGHRTALVALRNCLYLLPLGYLAYDWGITSGWFCLESXXXXXXXXXXXTSFFVHR 396
            SLAD SG RTALVALRNCLYL+P+G+LAYDWG+TSGWFCLES            SF   R
Sbjct: 181  SLADASGQRTALVALRNCLYLVPMGFLAYDWGVTSGWFCLESSLLTLAISASAFSFCRDR 240

Query: 395  TTETARRMFHASLLYLPVFMSGIMFHRLSDNKEHVSVKNSKARVGYTLTSEAPIKEFGNS 216
            T + A+RMFHASLLYLPVFMSG++FHRL DN+  ++ +          +S+A ++  GN 
Sbjct: 241  TMKKAKRMFHASLLYLPVFMSGLLFHRLCDNQAGLAEETE-----LLSSSKAVVRGSGND 295

Query: 215  DQRKKAKRVDSSGRQR 168
            D++ K +   +S + R
Sbjct: 296  DRKTKERHRSASVQAR 311


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