BLASTX nr result

ID: Cnidium21_contig00000400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000400
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   318   2e-84
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   316   7e-84
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   315   1e-83
gb|ABX71676.1| 60S ribosomal protein L6-like protein [Panax quin...   314   3e-83
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   313   6e-83

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
            gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
            putative [Ricinus communis]
          Length = 233

 Score =  318 bits (814), Expect = 2e-84
 Identities = 157/214 (73%), Positives = 173/214 (80%)
 Frame = -1

Query: 1039 VGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKSEAPVEKPPKFYPADDVKKPCFNKRK 860
            +GKYSRSQMYHKRGLWAIKAKNGGVFP+HD +PK  AP EKPPKFYPADDVKKP  NKRK
Sbjct: 20   IGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEKPPKFYPADDVKKPLLNKRK 79

Query: 859  PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKVNGVPLRRVNQAYV 680
            PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQL+SGLLL+TGPFK+NGVPLRRVNQ+YV
Sbjct: 80   PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLITGPFKINGVPLRRVNQSYV 139

Query: 679  IATSTKVNVDGVNVEKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKILPQGKKDDQQAVD 500
            IATSTKV++ GVNV+KFD                            +LPQ KKDDQ+ VD
Sbjct: 140  IATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAEKDEKNVLPQEKKDDQKTVD 199

Query: 499  AILLKSIECVPDLKTYLSARFSLMSGMKPHELVF 398
            A L+KSIE VP+LK YL+ARFSL +GMKPHELVF
Sbjct: 200  AALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
            gi|449533212|ref|XP_004173570.1| PREDICTED: 60S ribosomal
            protein L6-like [Cucumis sativus]
          Length = 231

 Score =  316 bits (809), Expect = 7e-84
 Identities = 161/214 (75%), Positives = 173/214 (80%)
 Frame = -1

Query: 1039 VGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKSEAPVEKPPKFYPADDVKKPCFNKRK 860
            VGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK+EAP EKPPKFYPADDVKKP  NKRK
Sbjct: 18   VGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPPKFYPADDVKKPIVNKRK 77

Query: 859  PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKVNGVPLRRVNQAYV 680
             KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQ+YV
Sbjct: 78   AKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYV 137

Query: 679  IATSTKVNVDGVNVEKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKILPQGKKDDQQAVD 500
            IATSTKV++ GV+VEKFD                             LPQ KKDDQ+AVD
Sbjct: 138  IATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQDKKDDQKAVD 197

Query: 499  AILLKSIECVPDLKTYLSARFSLMSGMKPHELVF 398
            + LLKSIE V DLKTYL+ARFSL +GMKPHELVF
Sbjct: 198  SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  315 bits (807), Expect = 1e-83
 Identities = 160/214 (74%), Positives = 173/214 (80%)
 Frame = -1

Query: 1039 VGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKSEAPVEKPPKFYPADDVKKPCFNKRK 860
            VGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK+++P EKPPKFYPADDVKKP  NKRK
Sbjct: 18   VGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRK 77

Query: 859  PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKVNGVPLRRVNQAYV 680
            PKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGVPLRRVNQ+YV
Sbjct: 78   PKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYV 137

Query: 679  IATSTKVNVDGVNVEKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKILPQGKKDDQQAVD 500
            IATSTKV++ GVNVEKF                              LPQ KKDDQ+AVD
Sbjct: 138  IATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVD 197

Query: 499  AILLKSIECVPDLKTYLSARFSLMSGMKPHELVF 398
            + LLKSIE V DLKTYL+ARFSL +GMKPHELVF
Sbjct: 198  SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>gb|ABX71676.1| 60S ribosomal protein L6-like protein [Panax quinquefolius]
          Length = 233

 Score =  314 bits (804), Expect = 3e-83
 Identities = 163/214 (76%), Positives = 174/214 (81%)
 Frame = -1

Query: 1039 VGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKSEAPVEKPPKFYPADDVKKPCFNKRK 860
            VGK+SRS+MYHKRGLWAIKAKNGGVFPRH ++P +   V KPPKFYPADDVKKP  NKRK
Sbjct: 20   VGKFSRSKMYHKRGLWAIKAKNGGVFPRHGSKPAALEAVVKPPKFYPADDVKKPLVNKRK 79

Query: 859  PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKVNGVPLRRVNQAYV 680
             KPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLL+TGPFK+NGVPLRRVNQ+YV
Sbjct: 80   EKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLITGPFKINGVPLRRVNQSYV 139

Query: 679  IATSTKVNVDGVNVEKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKILPQGKKDDQQAVD 500
            IATSTKV+V GVNVEK+D                           K LPQ KKDDQQAVD
Sbjct: 140  IATSTKVDVSGVNVEKYDDKYFAKEVEKKKKKGEGEFFEAEKDEKKALPQVKKDDQQAVD 199

Query: 499  AILLKSIECVPDLKTYLSARFSLMSGMKPHELVF 398
            AILLKSIE VPDLKTYLSARFSL+SGMKPHELVF
Sbjct: 200  AILLKSIEGVPDLKTYLSARFSLLSGMKPHELVF 233


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  313 bits (801), Expect = 6e-83
 Identities = 159/214 (74%), Positives = 172/214 (80%)
 Frame = -1

Query: 1039 VGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKSEAPVEKPPKFYPADDVKKPCFNKRK 860
            VGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK+++P EKPPKFYPADDVKKP  NKRK
Sbjct: 18   VGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPPKFYPADDVKKPLVNKRK 77

Query: 859  PKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLTSGLLLVTGPFKVNGVPLRRVNQAYV 680
            PKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL  GLLLVTGPFKVNGVPLRRVNQ+YV
Sbjct: 78   PKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPFGLLLVTGPFKVNGVPLRRVNQSYV 137

Query: 679  IATSTKVNVDGVNVEKFDXXXXXXXXXXXXXXXXXXXXXXXXXXXKILPQGKKDDQQAVD 500
            IATSTKV++ GVNVEKF                              LPQ KKDDQ+AVD
Sbjct: 138  IATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVD 197

Query: 499  AILLKSIECVPDLKTYLSARFSLMSGMKPHELVF 398
            + LLKSIE V DLKTYL+ARFSL +GMKPHELVF
Sbjct: 198  SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


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