BLASTX nr result

ID: Cnidium21_contig00000377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000377
         (1577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY84675.1| multicopy suppressor of IRA1 [Nicotiana tabacum]       377   0.0  
ref|NP_001234002.1| WD-40 repeat-containing protein MSI1 [Solanu...   374   0.0  
ref|XP_002265142.1| PREDICTED: WD-40 repeat-containing protein M...   370   0.0  
ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ri...   370   0.0  
ref|XP_004133950.1| PREDICTED: WD-40 repeat-containing protein M...   374   0.0  

>gb|ABY84675.1| multicopy suppressor of IRA1 [Nicotiana tabacum]
          Length = 424

 Score =  377 bits (967), Expect(2) = 0.0
 Identities = 174/186 (93%), Positives = 180/186 (96%)
 Frame = +2

Query: 791  RHEYLFGSVGDDQYLHLWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKT 970
            RHEYLFGSVGDDQYLH+WDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWV+ATGSTDKT
Sbjct: 238  RHEYLFGSVGDDQYLHIWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297

Query: 971  VKLFDLRKLSNALHTFDSHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPE 1150
            VKLFDLRK+S ALHT D HKEEVFQVGW+PKNETILASCCLGRRLMVWDLSRIDE+QTPE
Sbjct: 298  VKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357

Query: 1151 DAEDGPPELLFIHGGHTSKISDFSWNPCEPWVIASVAEDNILQIWQMAENIYHDEDDLPG 1330
            DAEDGPPELLFIHGGHTSKISDFSWNPCE WV+ASVAEDNILQIWQMAENIYHDEDDLPG
Sbjct: 358  DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPG 417

Query: 1331 DDLAKA 1348
            DD  KA
Sbjct: 418  DDATKA 423



 Score =  369 bits (947), Expect(2) = 0.0
 Identities = 170/193 (88%), Positives = 183/193 (94%)
 Frame = +3

Query: 93  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEQPGKDYSVQKLILGTHTSE 272
           RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDR+E PGKDYSVQK+ILGTHTSE
Sbjct: 15  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74

Query: 273 DEPNYLLVAHLQLPLQDSENDARQYDDDRSATGGFGAANAKVQIIQQIHHDGEVNRARYM 452
           +EPNYL++A +QLPL+D+ENDAR YDDDRS  GGFG AN KVQIIQQI+HDGEVNRARYM
Sbjct: 75  NEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYM 134

Query: 453 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDASCNPDLRLRGHNTEGYGLSWSQFKQGHL 632
           PQN FIIATKT+SAEVY+FDYSKHPSKPPLD +CNPDLRLRGH+TEGYGLSWSQFKQGHL
Sbjct: 135 PQNSFIIATKTISAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHL 194

Query: 633 LSGSDDAQICLWD 671
           LSGSDDAQ CLWD
Sbjct: 195 LSGSDDAQTCLWD 207


>ref|NP_001234002.1| WD-40 repeat-containing protein MSI1 [Solanum lycopersicum]
            gi|3122386|sp|O22466.1|MSI1_SOLLC RecName: Full=WD-40
            repeat-containing protein MSI1 gi|2394227|gb|AAB70241.1|
            WD-40 repeat protein [Solanum lycopersicum]
          Length = 424

 Score =  374 bits (961), Expect(2) = 0.0
 Identities = 173/185 (93%), Positives = 179/185 (96%)
 Frame = +2

Query: 791  RHEYLFGSVGDDQYLHLWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKT 970
            RHEYLFGSVGDDQYLH+WDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWV+ATGSTDKT
Sbjct: 238  RHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297

Query: 971  VKLFDLRKLSNALHTFDSHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPE 1150
            VKLFDLRK+S ALHT D HKEEVFQVGW+PKNETILASCCLGRRLMVWDLSRIDE+QTPE
Sbjct: 298  VKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357

Query: 1151 DAEDGPPELLFIHGGHTSKISDFSWNPCEPWVIASVAEDNILQIWQMAENIYHDEDDLPG 1330
            DAEDGPPELLFIHGGHTSKISDFSWNPCE WV+ASVAEDNILQIWQMAENIYHDEDDLPG
Sbjct: 358  DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPG 417

Query: 1331 DDLAK 1345
            DD  K
Sbjct: 418  DDAPK 422



 Score =  368 bits (945), Expect(2) = 0.0
 Identities = 170/193 (88%), Positives = 183/193 (94%)
 Frame = +3

Query: 93  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEQPGKDYSVQKLILGTHTSE 272
           RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDR+E  GKDYSVQK+ILGTHTSE
Sbjct: 15  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSE 74

Query: 273 DEPNYLLVAHLQLPLQDSENDARQYDDDRSATGGFGAANAKVQIIQQIHHDGEVNRARYM 452
           +EPNYL++A +QLPL+D+ENDAR YDDDRS  GGFG AN KVQIIQQI+HDGEVNRARYM
Sbjct: 75  NEPNYLMLAQVQLPLEDAENDARHYDDDRSEFGGFGCANGKVQIIQQINHDGEVNRARYM 134

Query: 453 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDASCNPDLRLRGHNTEGYGLSWSQFKQGHL 632
           PQNPFIIATKTVSAEVY+FDYSKHPSKPPLD +CNPDLRLRGH+TEGYGLSWSQFKQGHL
Sbjct: 135 PQNPFIIATKTVSAEVYVFDYSKHPSKPPLDGACNPDLRLRGHSTEGYGLSWSQFKQGHL 194

Query: 633 LSGSDDAQICLWD 671
           LSGSDD+ ICLWD
Sbjct: 195 LSGSDDSHICLWD 207


>ref|XP_002265142.1| PREDICTED: WD-40 repeat-containing protein MSI1 [Vitis vinifera]
          Length = 424

 Score =  370 bits (950), Expect(2) = 0.0
 Identities = 171/187 (91%), Positives = 181/187 (96%)
 Frame = +2

Query: 791  RHEYLFGSVGDDQYLHLWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKT 970
            RHEYLFGSVGDDQYL +WDLRTPSV+KPIQSV+AHQSEVNCLAFNPFNEWV+ATGSTDKT
Sbjct: 238  RHEYLFGSVGDDQYLLIWDLRTPSVSKPIQSVIAHQSEVNCLAFNPFNEWVVATGSTDKT 297

Query: 971  VKLFDLRKLSNALHTFDSHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPE 1150
            VKLFDLRK++ ALHTFD HKEEVFQVGW+PKNETILASCCLGRRLMVWDLSRIDE+QTPE
Sbjct: 298  VKLFDLRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357

Query: 1151 DAEDGPPELLFIHGGHTSKISDFSWNPCEPWVIASVAEDNILQIWQMAENIYHDEDDLPG 1330
            DAEDGPPELLFIHGGHTSKISDFSWNPCE WVIASVAEDNILQIWQMAENIYHDEDDLPG
Sbjct: 358  DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDLPG 417

Query: 1331 DDLAKAS 1351
            ++  KAS
Sbjct: 418  EESTKAS 424



 Score =  369 bits (948), Expect(2) = 0.0
 Identities = 171/193 (88%), Positives = 184/193 (95%)
 Frame = +3

Query: 93  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEQPGKDYSVQKLILGTHTSE 272
           RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDR+E PGKDYSVQK+ILGTHTSE
Sbjct: 15  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74

Query: 273 DEPNYLLVAHLQLPLQDSENDARQYDDDRSATGGFGAANAKVQIIQQIHHDGEVNRARYM 452
           +EPNYL++A +QLPL+D+ENDARQYDDDR   GGFG AN KVQIIQQI+HDGEVNRARYM
Sbjct: 75  NEPNYLMLAQVQLPLEDAENDARQYDDDRFDVGGFGCANGKVQIIQQINHDGEVNRARYM 134

Query: 453 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDASCNPDLRLRGHNTEGYGLSWSQFKQGHL 632
           PQN FIIATKTVSAEVY+FDYSKHPSKPPLD +C+PDLRLRGH+TEGYGLSWSQFKQGHL
Sbjct: 135 PQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSQFKQGHL 194

Query: 633 LSGSDDAQICLWD 671
           LSGSDDAQICLWD
Sbjct: 195 LSGSDDAQICLWD 207


>ref|XP_002526518.1| retinoblastoma-binding protein, putative [Ricinus communis]
           gi|223534193|gb|EEF35909.1| retinoblastoma-binding
           protein, putative [Ricinus communis]
          Length = 424

 Score =  370 bits (950), Expect(2) = 0.0
 Identities = 172/193 (89%), Positives = 184/193 (95%)
 Frame = +3

Query: 93  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEQPGKDYSVQKLILGTHTSE 272
           RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDR+E P KDYSVQK+ILGTHTSE
Sbjct: 15  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPDKDYSVQKMILGTHTSE 74

Query: 273 DEPNYLLVAHLQLPLQDSENDARQYDDDRSATGGFGAANAKVQIIQQIHHDGEVNRARYM 452
           +EPNYL++A +QLPL D+ENDAR YDDDRS  GGFGAAN KVQIIQQI+HDGEVNRARYM
Sbjct: 75  NEPNYLMLAQVQLPLDDAENDARHYDDDRSDMGGFGAANGKVQIIQQINHDGEVNRARYM 134

Query: 453 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDASCNPDLRLRGHNTEGYGLSWSQFKQGHL 632
           PQNPFIIATKTVSAEVYLFDYSKHPSKPPLD +C+PDLRLRGH+TEGYGLSWS+FKQGHL
Sbjct: 135 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKQGHL 194

Query: 633 LSGSDDAQICLWD 671
           LSGSDDAQICLWD
Sbjct: 195 LSGSDDAQICLWD 207



 Score =  368 bits (944), Expect(2) = 0.0
 Identities = 169/187 (90%), Positives = 180/187 (96%)
 Frame = +2

Query: 791  RHEYLFGSVGDDQYLHLWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKT 970
            RHEYLFGSVGDDQYL +WDLRTPSV+KP+QSVVAHQSEVNCLAFNPFNEWV+ATGSTDKT
Sbjct: 238  RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297

Query: 971  VKLFDLRKLSNALHTFDSHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPE 1150
            VKLFD+RK++ ALHTFD HKEEVFQVGW+PKNETILASCCLGRRLMVWDLSRIDE+QTPE
Sbjct: 298  VKLFDIRKINTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357

Query: 1151 DAEDGPPELLFIHGGHTSKISDFSWNPCEPWVIASVAEDNILQIWQMAENIYHDEDDLPG 1330
            DAEDGPPELLFIHGGHTSKISDFSWNPCE WVIASVAEDNILQIWQMAENIYHDEDD+PG
Sbjct: 358  DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDIPG 417

Query: 1331 DDLAKAS 1351
            D+  K S
Sbjct: 418  DESNKGS 424


>ref|XP_004133950.1| PREDICTED: WD-40 repeat-containing protein MSI1-like [Cucumis
           sativus] gi|449515418|ref|XP_004164746.1| PREDICTED:
           WD-40 repeat-containing protein MSI1-like [Cucumis
           sativus]
          Length = 423

 Score =  374 bits (959), Expect(2) = 0.0
 Identities = 172/193 (89%), Positives = 185/193 (95%)
 Frame = +3

Query: 93  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDRQEQPGKDYSVQKLILGTHTSE 272
           RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDR+E PGKDYSVQK+ILGTHTSE
Sbjct: 15  RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74

Query: 273 DEPNYLLVAHLQLPLQDSENDARQYDDDRSATGGFGAANAKVQIIQQIHHDGEVNRARYM 452
           +EPNYL++A +QLPL+DSENDAR YDDDR+  GGFG AN KVQIIQQI+HDGEVNRARYM
Sbjct: 75  NEPNYLMLAQVQLPLEDSENDARHYDDDRADAGGFGCANGKVQIIQQINHDGEVNRARYM 134

Query: 453 PQNPFIIATKTVSAEVYLFDYSKHPSKPPLDASCNPDLRLRGHNTEGYGLSWSQFKQGHL 632
           PQNPFIIATKTVSAEV++FDYSKHPSKPPLD +CNPDLRLRGHNTEGYGLSWS+FKQGHL
Sbjct: 135 PQNPFIIATKTVSAEVFVFDYSKHPSKPPLDGTCNPDLRLRGHNTEGYGLSWSKFKQGHL 194

Query: 633 LSGSDDAQICLWD 671
           LSGSDDAQICLWD
Sbjct: 195 LSGSDDAQICLWD 207



 Score =  361 bits (926), Expect(2) = 0.0
 Identities = 169/187 (90%), Positives = 178/187 (95%)
 Frame = +2

Query: 791  RHEYLFGSVGDDQYLHLWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVLATGSTDKT 970
            RHEYLFGSVGDDQYL +WDLRTPS  KP+QSVVAHQSEVNCLAFNPFNEWV+ATGSTDKT
Sbjct: 238  RHEYLFGSVGDDQYLLVWDLRTPSANKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKT 297

Query: 971  VKLFDLRKLSNALHTFDSHKEEVFQVGWSPKNETILASCCLGRRLMVWDLSRIDEQQTPE 1150
            VKLFDLRK+S ALHTFD HKEEVFQVGW+PKNETILASCCLGRRLMVWDLSRIDE+QTPE
Sbjct: 298  VKLFDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPE 357

Query: 1151 DAEDGPPELLFIHGGHTSKISDFSWNPCEPWVIASVAEDNILQIWQMAENIYHDEDDLPG 1330
            DAEDGPPELLFIHGGHTSKISDFSWNPCE WV+ASVAEDNILQIWQMAENIYHDEDDLP 
Sbjct: 358  DAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLP- 416

Query: 1331 DDLAKAS 1351
            ++  KAS
Sbjct: 417  EEPPKAS 423


Top