BLASTX nr result
ID: Cnidium21_contig00000372
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00000372 (605 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop... 331 7e-89 sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch... 330 9e-89 gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group] 329 3e-88 ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop... 328 6e-88 ref|XP_002519282.1| tex protein-relatedtranscription accessory p... 327 8e-88 >ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis sativus] Length = 413 Score = 331 bits (848), Expect = 7e-89 Identities = 172/201 (85%), Positives = 178/201 (88%) Frame = +1 Query: 1 DSLILSLRSVQNDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXXEGIRGFVPFSQISTK 180 DSLILSLRS+Q DLAWERCRQLQAED EG+RGFVPFSQISTK Sbjct: 162 DSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTK 221 Query: 181 SPAEELIEKEIPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFI 360 S AEEL+ KE+PLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFI Sbjct: 222 SNAEELLSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFI 281 Query: 361 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 540 DIGGINGLLHVSQISHDR+SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDM Sbjct: 282 DIGGINGLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDM 341 Query: 541 IRNPKLVFEKAEEMAQTFRQR 603 IRNPKLVFEKAEEMAQTFRQR Sbjct: 342 IRNPKLVFEKAEEMAQTFRQR 362 >sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1| ribosomal protein S1 [Spinacia oleracea] gi|170143|gb|AAA34045.1| chloroplast ribosomal protein S1 [Spinacia oleracea] Length = 411 Score = 330 bits (847), Expect = 9e-89 Identities = 172/201 (85%), Positives = 178/201 (88%) Frame = +1 Query: 1 DSLILSLRSVQNDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXXEGIRGFVPFSQISTK 180 DSLILSLR +Q +LAWERCRQLQAED EG+RGFVPFSQIS+K Sbjct: 159 DSLILSLRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSK 218 Query: 181 SPAEELIEKEIPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFI 360 S AEEL+EKEIPLKFVEVDEEQSRLV+SNRKAMADSQAQLGIGSVV GTVQSLKPYGAFI Sbjct: 219 SSAEELLEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFI 278 Query: 361 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 540 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM Sbjct: 279 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 338 Query: 541 IRNPKLVFEKAEEMAQTFRQR 603 IRNPKLVFEKAEEMAQTFRQR Sbjct: 339 IRNPKLVFEKAEEMAQTFRQR 359 >gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group] Length = 415 Score = 329 bits (843), Expect = 3e-88 Identities = 170/201 (84%), Positives = 178/201 (88%) Frame = +1 Query: 1 DSLILSLRSVQNDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXXEGIRGFVPFSQISTK 180 DSLILSLRS+Q DLAWERCRQLQAED EG+RGFVPFSQIS K Sbjct: 164 DSLILSLRSIQYDLAWERCRQLQAEDVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAK 223 Query: 181 SPAEELIEKEIPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFI 360 S AEELI+KE+PLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV+GTVQSLKPYGAF+ Sbjct: 224 STAEELIDKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFV 283 Query: 361 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 540 DIGGINGLLHVSQISHDRVSDI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM Sbjct: 284 DIGGINGLLHVSQISHDRVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 343 Query: 541 IRNPKLVFEKAEEMAQTFRQR 603 IRNPKLVFEKA+EMAQ FRQR Sbjct: 344 IRNPKLVFEKADEMAQIFRQR 364 >ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera] gi|296083203|emb|CBI22839.3| unnamed protein product [Vitis vinifera] Length = 410 Score = 328 bits (840), Expect = 6e-88 Identities = 170/201 (84%), Positives = 178/201 (88%) Frame = +1 Query: 1 DSLILSLRSVQNDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXXEGIRGFVPFSQISTK 180 DSLILSLRS+Q DLAWERCRQLQAED EG+RGFVPFSQIS+K Sbjct: 158 DSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSK 217 Query: 181 SPAEELIEKEIPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFI 360 + AEEL++KE+P+KFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVV GTVQSLKPYGAFI Sbjct: 218 TTAEELLDKELPVKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFI 277 Query: 361 DIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDM 540 DIGGINGLLHVSQISHDRVSDIATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDM Sbjct: 278 DIGGINGLLHVSQISHDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDM 337 Query: 541 IRNPKLVFEKAEEMAQTFRQR 603 IRNPKLVFEKAEEMAQTFRQR Sbjct: 338 IRNPKLVFEKAEEMAQTFRQR 358 >ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] gi|223541597|gb|EEF43146.1| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] Length = 412 Score = 327 bits (839), Expect = 8e-88 Identities = 172/202 (85%), Positives = 180/202 (89%), Gaps = 1/202 (0%) Frame = +1 Query: 1 DSLILSLRSVQNDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXXEG-IRGFVPFSQIST 177 DSLILSLR++Q DL+WERCRQLQAED EG +RGFVPFSQIS+ Sbjct: 160 DSLILSLRAIQYDLSWERCRQLQAEDVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISS 219 Query: 178 KSPAEELIEKEIPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAF 357 KS AEEL+EKE+PLKFV+VDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAF Sbjct: 220 KSTAEELLEKELPLKFVDVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAF 279 Query: 358 IDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGD 537 IDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGD Sbjct: 280 IDIGGINGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGD 339 Query: 538 MIRNPKLVFEKAEEMAQTFRQR 603 MIRNPKLVFEKAEEMAQTFRQR Sbjct: 340 MIRNPKLVFEKAEEMAQTFRQR 361