BLASTX nr result
ID: Cnidium21_contig00000345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000345
(981 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense] 261 2e-67
emb|CAA48410.1| light harvesting chlorophyll a /b binding protei... 261 2e-67
gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso... 260 4e-67
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa] 259 5e-67
gb|AFK40061.1| unknown [Medicago truncatula] 259 5e-67
>gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense]
Length = 266
Score = 261 bits (666), Expect = 2e-67
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = -1
Query: 576 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 397
FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPL
Sbjct: 139 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 198
Query: 396 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 217
GLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF
Sbjct: 199 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 258
Query: 216 ATNFVPGK 193
ATNFVPGK
Sbjct: 259 ATNFVPGK 266
Score = 144 bits (362), Expect = 4e-32
Identities = 72/94 (76%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
Frame = -2
Query: 980 MAASTMALSSPSFAGKAVQVAPSSSELFGNGRVSMRK--TAKKVTVSDSPWYGPDRVKYL 807
MAAS+MAL+SP+ AGK V++ PSS EL G + +MRK T KKV S SPWYGPDRVKYL
Sbjct: 1 MAASSMALTSPALAGKPVKLTPSSQEL-GVAKFTMRKGATTKKVASSGSPWYGPDRVKYL 59
Query: 806 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 705
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
>emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix]
Length = 193
Score = 261 bits (666), Expect = 2e-67
Identities = 126/128 (98%), Positives = 128/128 (100%)
Frame = -1
Query: 576 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 397
FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPL
Sbjct: 66 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 125
Query: 396 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 217
GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+
Sbjct: 126 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 185
Query: 216 ATNFVPGK 193
ATNFVPGK
Sbjct: 186 ATNFVPGK 193
>gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba]
Length = 266
Score = 260 bits (664), Expect = 4e-67
Identities = 125/128 (97%), Positives = 128/128 (100%)
Frame = -1
Query: 576 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 397
FSEGGLDYLGNPSLVHAQSILAIWATQV+LMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL
Sbjct: 139 FSEGGLDYLGNPSLVHAQSILAIWATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 198
Query: 396 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 217
GLA+DPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF
Sbjct: 199 GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 258
Query: 216 ATNFVPGK 193
ATNFVPGK
Sbjct: 259 ATNFVPGK 266
Score = 152 bits (383), Expect = 2e-34
Identities = 74/92 (80%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
Frame = -2
Query: 974 ASTMALSSPSFAGKAVQVAPSSSELFGNGRVSMRKTA--KKVTVSDSPWYGPDRVKYLGP 801
A++MALSSPS GKAV++AP++SE+FG GRVSMRKTA K S SPWYGPDRVKYLGP
Sbjct: 2 AASMALSSPSLVGKAVKLAPAASEVFGEGRVSMRKTAGKPKPVSSGSPWYGPDRVKYLGP 61
Query: 800 FSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 705
FSGEAPSYLTGEF GDYGWDTAGLSADPETFA
Sbjct: 62 FSGEAPSYLTGEFAGDYGWDTAGLSADPETFA 93
>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
Length = 266
Score = 259 bits (663), Expect = 5e-67
Identities = 125/128 (97%), Positives = 128/128 (100%)
Frame = -1
Query: 576 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 397
FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPL
Sbjct: 139 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 198
Query: 396 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 217
GLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+
Sbjct: 199 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 258
Query: 216 ATNFVPGK 193
ATNFVPGK
Sbjct: 259 ATNFVPGK 266
Score = 146 bits (369), Expect = 7e-33
Identities = 74/94 (78%), Positives = 80/94 (85%), Gaps = 2/94 (2%)
Frame = -2
Query: 980 MAASTMALSSPSFAGKAVQVAPSSSELFGNGRVSMRKTA--KKVTVSDSPWYGPDRVKYL 807
MAAS+MALSSP+ AGK V++ PSS EL G R +MRK+A KKV S SPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQEL-GAARFTMRKSATTKKVASSGSPWYGPDRVKYL 59
Query: 806 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 705
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93
>gb|AFK40061.1| unknown [Medicago truncatula]
Length = 266
Score = 259 bits (663), Expect = 5e-67
Identities = 125/128 (97%), Positives = 128/128 (100%)
Frame = -1
Query: 576 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPL 397
FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPL
Sbjct: 139 FSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPL 198
Query: 396 GLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAF 217
GLA+DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+
Sbjct: 199 GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAY 258
Query: 216 ATNFVPGK 193
ATNFVPGK
Sbjct: 259 ATNFVPGK 266
Score = 146 bits (369), Expect = 7e-33
Identities = 74/94 (78%), Positives = 79/94 (84%), Gaps = 2/94 (2%)
Frame = -2
Query: 980 MAASTMALSSPSFAGKAVQVAPSSSELFGNGRVSMRK--TAKKVTVSDSPWYGPDRVKYL 807
MAAS+MALSSP+ AGK V++ PSS EL G R +MRK T KKV S SPWYGPDRVKYL
Sbjct: 1 MAASSMALSSPTLAGKPVKLTPSSQEL-GAARFTMRKAATTKKVASSGSPWYGPDRVKYL 59
Query: 806 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFA 705
GPFSGE PSYLTGEFPGDYGWDTAGLSADPETFA
Sbjct: 60 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFA 93