BLASTX nr result

ID: Cnidium21_contig00000289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000289
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514063.1| conserved hypothetical protein [Ricinus comm...   108   6e-22
ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|2...   101   5e-20
gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]      100   1e-19
gb|ABK94669.1| unknown [Populus trichocarpa]                          100   1e-19
gb|ACO24551.1| chloroplast photosystem II subunit X [Vigna radiata]    96   3e-18

>ref|XP_002514063.1| conserved hypothetical protein [Ricinus communis]
           gi|223546519|gb|EEF48017.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 121

 Score =  108 bits (269), Expect = 6e-22
 Identities = 66/120 (55%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
 Frame = +3

Query: 21  MASTCAVSMVMPITCASQKKVPSSEAFFKPLPVRXXXXXXXXXXXXXXXXXXXLKEKAIT 200
           MAST AVSM MPIT ASQKKVPSSEAFFKPLP+R                   LKEKAIT
Sbjct: 1   MASTSAVSMAMPITSASQKKVPSSEAFFKPLPLRQSKAVMASKSNGKFQVKASLKEKAIT 60

Query: 201 GXXXXXXXXSVVVPDVAEAA-SGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXXNFDPVKR 377
           G        S+V+P+VAEAA SGVSPSLKNFLLS                   NFDPVKR
Sbjct: 61  GLTAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIVAGGVVLTAIVGAIIGVANFDPVKR 120


>ref|XP_002326114.1| predicted protein [Populus trichocarpa] gi|222833307|gb|EEE71784.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  101 bits (252), Expect = 5e-20
 Identities = 59/121 (48%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +3

Query: 21  MASTCAVSMVMPITCASQKKVPSSEAFFKPLPVRXXXXXXXXXXXXXXXXXXXLKEKAIT 200
           MAST AVSM +P+T ASQK++P+SEAFFKPLP R                   LKEK +T
Sbjct: 1   MASTSAVSMALPLTYASQKRIPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVT 60

Query: 201 GXXXXXXXXSVVVPDVAEAA-SGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXXNFDPVKR 377
           G        S+V+PDVAEAA +G SPSLKNFLLS                   NFDPVKR
Sbjct: 61  GLTAGALTASMVIPDVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

Query: 378 G 380
           G
Sbjct: 121 G 121


>gb|ABK96439.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 121

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/121 (48%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +3

Query: 21  MASTCAVSMVMPITCASQKKVPSSEAFFKPLPVRXXXXXXXXXXXXXXXXXXXLKEKAIT 200
           MAST AVSM +P+T ASQK+VP+SEAFFKPLP R                   LKEK +T
Sbjct: 1   MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVT 60

Query: 201 GXXXXXXXXSVVVPDVAEAA-SGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXXNFDPVKR 377
           G        S+V+P+VAEAA +G SPSLKNFLLS                   NFDPVKR
Sbjct: 61  GLTAGALTASMVIPEVAEAAGAGTSPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

Query: 378 G 380
           G
Sbjct: 121 G 121


>gb|ABK94669.1| unknown [Populus trichocarpa]
          Length = 121

 Score =  100 bits (249), Expect = 1e-19
 Identities = 59/121 (48%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +3

Query: 21  MASTCAVSMVMPITCASQKKVPSSEAFFKPLPVRXXXXXXXXXXXXXXXXXXXLKEKAIT 200
           MAST AVSM +P+T ASQK+VP+SEAFFKPLP R                   LKEK +T
Sbjct: 1   MASTSAVSMALPLTYASQKRVPASEAFFKPLPARPSKAMSASKSSGRFQVKASLKEKLVT 60

Query: 201 GXXXXXXXXSVVVPDVAEAA-SGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXXNFDPVKR 377
           G        S+V+P+VAEAA +G SPSLKNFLLS                   NFDPVKR
Sbjct: 61  GLTAGALTASMVIPEVAEAAGAGASPSLKNFLLSIVAGGVVLVAIIGAVIGVSNFDPVKR 120

Query: 378 G 380
           G
Sbjct: 121 G 121


>gb|ACO24551.1| chloroplast photosystem II subunit X [Vigna radiata]
          Length = 120

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 58/120 (48%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
 Frame = +3

Query: 21  MASTCAVSMVMPITCASQKK-VPSSEAFFKPLPVRXXXXXXXXXXXXXXXXXXXLKEKAI 197
           MAST A+SM MP+TCAS KK VP+S+AFFKPLP+R                   +KEK +
Sbjct: 1   MASTSALSMAMPVTCASHKKVVPTSDAFFKPLPLRSSKALTASNTNGRFQVRASMKEKVV 60

Query: 198 TGXXXXXXXXSVVVPDVAEAASGVSPSLKNFLLSXXXXXXXXXXXXXXXXXXXNFDPVKR 377
           TG        S++ PDVAEAAS VSPSLKNFLLS                   NFDPVKR
Sbjct: 61  TGLTAAALTASMMAPDVAEAAS-VSPSLKNFLLSIAAGGVVVVAIIGVVIGVANFDPVKR 119


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