BLASTX nr result

ID: Cnidium21_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000253
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|1...    99   1e-18
ref|XP_002309206.1| predicted protein [Populus trichocarpa] gi|2...    92   1e-16
gb|ABK94540.1| unknown [Populus trichocarpa]                           92   1e-16
ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11...    91   3e-16
gb|AFK34261.1| unknown [Lotus japonicus]                               90   5e-16

>ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|118485469|gb|ABK94590.1|
           unknown [Populus trichocarpa]
           gi|222873528|gb|EEF10659.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 52/59 (88%), Positives = 54/59 (91%)
 Frame = -1

Query: 613 GSKMSLKPISSPVPVVWYPTLAVFMLAIGLIVTASFFIYEATSSKRNRSLAKELTTGAI 437
           GSK +   ISSPVPV WYPTLAVFMLAIGLIVTASFFIYEATSS+RNRSLAKELTTGAI
Sbjct: 2   GSKAAA--ISSPVPVAWYPTLAVFMLAIGLIVTASFFIYEATSSRRNRSLAKELTTGAI 58


>ref|XP_002309206.1| predicted protein [Populus trichocarpa] gi|222855182|gb|EEE92729.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = -1

Query: 613 GSKMSLKPISSPVPVVWYPTLAVFMLAIGLIVTASFFIYEATSSKRNRSLAKELTTGAI 437
           GSK +   I+SPVPV WYPTLA+FMLAIGL+V+ASFFIYEATSS+R+RSLAKELTTGA+
Sbjct: 2   GSKAAA--ITSPVPVTWYPTLAIFMLAIGLMVSASFFIYEATSSRRSRSLAKELTTGAL 58


>gb|ABK94540.1| unknown [Populus trichocarpa]
          Length = 78

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 46/59 (77%), Positives = 54/59 (91%)
 Frame = -1

Query: 613 GSKMSLKPISSPVPVVWYPTLAVFMLAIGLIVTASFFIYEATSSKRNRSLAKELTTGAI 437
           GSK +   I+SPVPV WYPTLA+FMLAIGL+V+ASFFIYEATSS+R+RSLAKELTTGA+
Sbjct: 2   GSKAAA--ITSPVPVTWYPTLAIFMLAIGLMVSASFFIYEATSSRRSRSLAKELTTGAL 58


>ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus] gi|449489875|ref|XP_004158446.1| PREDICTED:
           UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus]
          Length = 76

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 42/56 (75%), Positives = 50/56 (89%)
 Frame = -1

Query: 604 MSLKPISSPVPVVWYPTLAVFMLAIGLIVTASFFIYEATSSKRNRSLAKELTTGAI 437
           M+ KP++SPVP  WYPTLAV M+++GLIVTASFFIYEATSS++NRSLAKELT G I
Sbjct: 1   MAPKPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTI 56


>gb|AFK34261.1| unknown [Lotus japonicus]
          Length = 76

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 42/56 (75%), Positives = 51/56 (91%)
 Frame = -1

Query: 604 MSLKPISSPVPVVWYPTLAVFMLAIGLIVTASFFIYEATSSKRNRSLAKELTTGAI 437
           M+ KPI+SPVP  WYPTL+VF LAIGL++TASFFIYEATSS++ RSLA+ELTTGA+
Sbjct: 1   MAPKPITSPVPDAWYPTLSVFTLAIGLVLTASFFIYEATSSRKTRSLAQELTTGAV 56


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