BLASTX nr result
ID: Cnidium21_contig00000237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000237
(1682 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyr... 611 e-172
ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricin... 610 e-172
ref|NP_173069.1| serinc-domain containing protein [Arabidopsis t... 609 e-172
ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vit... 609 e-172
ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|2... 607 e-171
>ref|XP_002890152.1| TMS membrane family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335994|gb|EFH66411.1| TMS membrane family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 412
Score = 611 bits (1576), Expect = e-172
Identities = 297/393 (75%), Positives = 325/393 (82%), Gaps = 1/393 (0%)
Frame = -2
Query: 1477 QTVVSGISRRSARIAYCGLFALSLIVSWILRAVAAPFMEKIPWINHFHQTPSREWFETDA 1298
+TVVSGISRRSARIAYCGLFALSLIVSWILR VAAP MEK+PWINHFH+TP REWFETDA
Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79
Query: 1297 VLRVSLGNFLFFSILSFIMVGVKSQKDPRDGIHHGGWMMKVICWCLLVILMFFLPNEFIS 1118
VLRVSLGNFLFFSILS +M+GVK+QKDPRDGIHHGGWMMK+ICWC+LVILMFFLPNE IS
Sbjct: 80 VLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVILMFFLPNEIIS 139
Query: 1117 FYETTSKFGSGXXXXXXXXXXXXXVHSWNDKWVGYDEQFWYVALLVVSLVCYVATFSFAG 938
FYE+ SKFG+G VH WND WVGYDEQFWY ALLVVSLVCY+ATF F+G
Sbjct: 140 FYESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSG 199
Query: 937 VLFYLFTPSGQDCGLNTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSG 758
+LF+ FTPSG DCGLNTFFI+MTLIF F+FA+V LHP V GSILPASVISLYC YLCYSG
Sbjct: 200 LLFHWFTPSGHDCGLNTFFIIMTLIFVFVFAVVVLHPAVGGSILPASVISLYCMYLCYSG 259
Query: 757 LASEPREYACNGLHKHSQAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAGK 578
LASEPR+Y CNGLHKHS+A VYSAVRAG PRA K
Sbjct: 260 LASEPRDYECNGLHKHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAEK 319
Query: 577 PLLPLD-KLDEHEEKENARPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG 401
PLLP+D K +E EEKEN +PV+YSY+FFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG
Sbjct: 320 PLLPIDGKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG 379
Query: 400 WASVWVRILTGWATAALFIWSMVAPHLFPEREF 302
W SVWVR++T WATA LFIWS+VAP LFP+REF
Sbjct: 380 WPSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412
>ref|XP_002512768.1| Membrane protein PB1A10.07c, putative [Ricinus communis]
gi|223547779|gb|EEF49271.1| Membrane protein PB1A10.07c,
putative [Ricinus communis]
Length = 413
Score = 610 bits (1573), Expect = e-172
Identities = 296/394 (75%), Positives = 324/394 (82%), Gaps = 2/394 (0%)
Frame = -2
Query: 1477 QTVVSGISRRSARIAYCGLFALSLIVSWILRAVAAPFMEKIPWINHFHQTPSREWFETDA 1298
+TVVSGISRRSARIAYCGLFALSLIVSWILR VAAP MEK+PWINHFH+TP REWFETDA
Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79
Query: 1297 VLRVSLGNFLFFSILSFIMVGVKSQKDPRDGIHHGGWMMKVICWCLLVILMFFLPNEFIS 1118
VLRVSLGNFLFF+IL+ +MVGVKSQKDPRDG+HHGGWMMK+ICWC+LVI MFFLPNE +S
Sbjct: 80 VLRVSLGNFLFFTILATLMVGVKSQKDPRDGLHHGGWMMKIICWCVLVIFMFFLPNEIVS 139
Query: 1117 FYETTSKFGSGXXXXXXXXXXXXXVHSWNDKWVGYDEQFWYVALLVVSLVCYVATFSFAG 938
FYE+ SKFGSG VH WNDKWVGY+EQFWY+AL VVSLVCY+ATF F+G
Sbjct: 140 FYESMSKFGSGLFLLVQVVLLLDFVHGWNDKWVGYNEQFWYIALFVVSLVCYLATFVFSG 199
Query: 937 VLFYLFTPSGQDCGLNTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSG 758
LF+ FTPSGQDCGLNTFFI MTLI +FAIV LHP VSGSILPASVIS YC YLCYSG
Sbjct: 200 FLFHWFTPSGQDCGLNTFFITMTLILVIVFAIVALHPAVSGSILPASVISAYCMYLCYSG 259
Query: 757 LASEPREYACNGLHKHSQAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAGK 578
LASEPREY CNGLHKHS+A VYSAVRAG PRAGK
Sbjct: 260 LASEPREYECNGLHKHSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTTLLSPPSSPRAGK 319
Query: 577 PLLPLDK--LDEHEEKENARPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDV 404
PLLPL+ +EHEEKE A+PVTYSY+FFHIIFSLASMYSAMLLTGWSTSVGESGKLVDV
Sbjct: 320 PLLPLENKIAEEHEEKEKAKPVTYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDV 379
Query: 403 GWASVWVRILTGWATAALFIWSMVAPHLFPEREF 302
GW SVWVRI+TGWATA L++WS++AP LFP+REF
Sbjct: 380 GWPSVWVRIITGWATAGLYVWSLLAPILFPDREF 413
>ref|NP_173069.1| serinc-domain containing protein [Arabidopsis thaliana]
gi|334182610|ref|NP_001185008.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|6587821|gb|AAF18512.1|AC010924_25 Contains similarity
to gb|AF181686 membrane protein TMS1d from Drosophila
melanogaster. ESTs gb|R64994, gb|AI994832, gb|Z47674 come
from this gene [Arabidopsis thaliana]
gi|332191295|gb|AEE29416.1| serinc-domain containing
protein [Arabidopsis thaliana]
gi|332191296|gb|AEE29417.1| serinc-domain containing
protein [Arabidopsis thaliana]
Length = 412
Score = 609 bits (1571), Expect = e-172
Identities = 297/393 (75%), Positives = 323/393 (82%), Gaps = 1/393 (0%)
Frame = -2
Query: 1477 QTVVSGISRRSARIAYCGLFALSLIVSWILRAVAAPFMEKIPWINHFHQTPSREWFETDA 1298
+TVVSGISRRSARIAYCGLFALSLIVSWILR VAAP MEK+PWINHFH+TP REWFETDA
Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDA 79
Query: 1297 VLRVSLGNFLFFSILSFIMVGVKSQKDPRDGIHHGGWMMKVICWCLLVILMFFLPNEFIS 1118
VLRVSLGNFLFFSILS +M+GVK+QKDPRDGIHHGGWMMK+ICWC+LVI MFFLPNE IS
Sbjct: 80 VLRVSLGNFLFFSILSVMMIGVKNQKDPRDGIHHGGWMMKIICWCILVIFMFFLPNEIIS 139
Query: 1117 FYETTSKFGSGXXXXXXXXXXXXXVHSWNDKWVGYDEQFWYVALLVVSLVCYVATFSFAG 938
FYE+ SKFG+G VH WND WVGYDEQFWY ALLVVSLVCY+ATF F+G
Sbjct: 140 FYESMSKFGAGFFLLVQVVLLLDFVHGWNDTWVGYDEQFWYAALLVVSLVCYLATFVFSG 199
Query: 937 VLFYLFTPSGQDCGLNTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSG 758
LF+ FTPSG DCGLNTFFI+MTLIF F+FAIV LHPTV GSILPASVISLYC YLCYSG
Sbjct: 200 FLFHWFTPSGHDCGLNTFFIIMTLIFVFVFAIVVLHPTVGGSILPASVISLYCMYLCYSG 259
Query: 757 LASEPREYACNGLHKHSQAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAGK 578
LASEPR+Y CNGLH HS+A VYSAVRAG PRA K
Sbjct: 260 LASEPRDYECNGLHNHSKAVSTGTMTIGLLTTVLSVVYSAVRAGSSTTLLSPPDSPRAEK 319
Query: 577 PLLPLD-KLDEHEEKENARPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG 401
PLLP+D K +E EEKEN +PV+YSY+FFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG
Sbjct: 320 PLLPIDGKAEEKEEKENKKPVSYSYAFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDVG 379
Query: 400 WASVWVRILTGWATAALFIWSMVAPHLFPEREF 302
W SVWVR++T WATA LFIWS+VAP LFP+REF
Sbjct: 380 WPSVWVRVVTSWATAGLFIWSLVAPILFPDREF 412
>ref|XP_002270610.1| PREDICTED: probable serine incorporator [Vitis vinifera]
gi|298204750|emb|CBI25248.3| unnamed protein product
[Vitis vinifera]
Length = 413
Score = 609 bits (1570), Expect = e-172
Identities = 295/394 (74%), Positives = 324/394 (82%), Gaps = 2/394 (0%)
Frame = -2
Query: 1477 QTVVSGISRRSARIAYCGLFALSLIVSWILRAVAAPFMEKIPWINHFHQTPSREWFETDA 1298
+TVVSGISRRSARIAYCGLFALSLIVSWILR VAAP MEK+PWINHFH+TP+REWFETDA
Sbjct: 20 RTVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPNREWFETDA 79
Query: 1297 VLRVSLGNFLFFSILSFIMVGVKSQKDPRDGIHHGGWMMKVICWCLLVILMFFLPNEFIS 1118
VLRVS GNFLFF+IL+ +M+GVK+QKDPRDG+HHGGWMMK+ICWC+LVI FFLPNE IS
Sbjct: 80 VLRVSFGNFLFFTILAILMIGVKNQKDPRDGMHHGGWMMKIICWCILVIFTFFLPNELIS 139
Query: 1117 FYETTSKFGSGXXXXXXXXXXXXXVHSWNDKWVGYDEQFWYVALLVVSLVCYVATFSFAG 938
FYETTSKFGSG VH WND WVGY EQFWY+AL VVSLVCYVATFSF+G
Sbjct: 140 FYETTSKFGSGLFLLVQVVLLLDFVHRWNDTWVGYGEQFWYIALFVVSLVCYVATFSFSG 199
Query: 937 VLFYLFTPSGQDCGLNTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSG 758
+LF+ FTPSG DCGLNTFFIVMTLI AF+FAIV LHP V GSILPASV+SLYC YLCYSG
Sbjct: 200 LLFHFFTPSGHDCGLNTFFIVMTLILAFVFAIVALHPAVGGSILPASVVSLYCMYLCYSG 259
Query: 757 LASEPREYACNGLHKHSQAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPR--A 584
L+SEPR+Y CNGLHKHS+A +YSAVRAG PR A
Sbjct: 260 LSSEPRDYECNGLHKHSKAVSTGTLTLGLLTTILSVIYSAVRAGSSTTLLSPPSSPRAGA 319
Query: 583 GKPLLPLDKLDEHEEKENARPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVDV 404
GKPLLPL+K D EEK A+PVTYSY+FFHIIFSLASMYSAMLLTGWSTSVGESG+LVDV
Sbjct: 320 GKPLLPLEKTDVPEEKHEAKPVTYSYTFFHIIFSLASMYSAMLLTGWSTSVGESGRLVDV 379
Query: 403 GWASVWVRILTGWATAALFIWSMVAPHLFPEREF 302
GW SVWVRI+TGWATAAL+IWS+ AP LFPEREF
Sbjct: 380 GWPSVWVRIVTGWATAALYIWSLAAPILFPEREF 413
>ref|XP_002304839.1| predicted protein [Populus trichocarpa] gi|222842271|gb|EEE79818.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 607 bits (1565), Expect = e-171
Identities = 300/395 (75%), Positives = 327/395 (82%), Gaps = 4/395 (1%)
Frame = -2
Query: 1474 TVVSGISRRSARIAYCGLFALSLIVSWILRAVAAPFMEKIPWINHFHQTPSREWFETDAV 1295
TVVSGISRRSARIAYCGLFALSLIVSWILR VAAP MEK+PWINHFH+TP REWFETDAV
Sbjct: 21 TVVSGISRRSARIAYCGLFALSLIVSWILREVAAPLMEKLPWINHFHKTPDREWFETDAV 80
Query: 1294 LRVSLGNFLFFSILSFIMVGVKSQKDPRDGIHHGGWMMKVICWCLLVILMFFLPNEFISF 1115
LRVSLGNF+FF+IL+ +MVGVK+QKDPRD +HHGGWM KV+CWC+LVILMFFLPNE +SF
Sbjct: 81 LRVSLGNFMFFTILATMMVGVKNQKDPRDSLHHGGWMAKVVCWCILVILMFFLPNEIVSF 140
Query: 1114 YETTSKFGSGXXXXXXXXXXXXXVHSWNDKWVGYDEQFWYVALLVVSLVCYVATFSFAGV 935
YE+ SKFGSG VH WNDKWVGYDE+FWYVAL VVSLVCYV TF+F+G+
Sbjct: 141 YESISKFGSGLFLLVQVVLLLDFVHGWNDKWVGYDEKFWYVALFVVSLVCYVGTFAFSGL 200
Query: 934 LFYLFTPSGQDCGLNTFFIVMTLIFAFLFAIVTLHPTVSGSILPASVISLYCTYLCYSGL 755
LF+ FTPSGQDCGLNTFFIVMTLIFAF+FAIV LHP V+GS+LPASVISLYC YLCYSGL
Sbjct: 201 LFHWFTPSGQDCGLNTFFIVMTLIFAFVFAIVALHPAVNGSVLPASVISLYCMYLCYSGL 260
Query: 754 ASEPREYACNGLHKHSQAXXXXXXXXXXXXXXXXXVYSAVRAGXXXXXXXXXXXPRAG-- 581
ASEPREY CNGLH+HS+A VYSAVRAG PRAG
Sbjct: 261 ASEPREYECNGLHRHSKAVSTGTLSIGLLTTVLSVVYSAVRAGSSTALLSPPSSPRAGAD 320
Query: 580 KPLLPLD-KLDEHEEKENA-RPVTYSYSFFHIIFSLASMYSAMLLTGWSTSVGESGKLVD 407
KPLLPLD K +E EEKE A +PVTYSYSFFHIIFSLASMYSAMLLTGWSTS+GESGKLVD
Sbjct: 321 KPLLPLDNKANEQEEKEKACKPVTYSYSFFHIIFSLASMYSAMLLTGWSTSIGESGKLVD 380
Query: 406 VGWASVWVRILTGWATAALFIWSMVAPHLFPEREF 302
VGW SVWVRILTGWATA L+ WS+VAP LFPEREF
Sbjct: 381 VGWPSVWVRILTGWATAGLYTWSLVAPILFPEREF 415