BLASTX nr result

ID: Cnidium21_contig00000172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000172
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isofo...   219   2e-55
ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   218   5e-55
ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like ...   218   5e-55
ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycin...   217   1e-54
ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like ...   217   1e-54

>ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isoform 1 [Vitis vinifera]
           gi|359490182|ref|XP_003634047.1| PREDICTED: 40S
           ribosomal protein S20-2 isoform 2 [Vitis vinifera]
           gi|147777804|emb|CAN62522.1| hypothetical protein
           VITISV_002374 [Vitis vinifera]
          Length = 122

 Score =  219 bits (559), Expect = 2e-55
 Identities = 112/122 (91%), Positives = 116/122 (95%)
 Frame = -3

Query: 551 AYAAVKTATKPGYEEAQESLHKIRITLSSKNVKNLEKVCADLVRGAKDKTLRVKGPVRMP 372
           AYAA+K  TKPG EE QE++HKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 2   AYAAMKP-TKPGLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 371 TKVLKITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 192
           TKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 191 DN 186
           D+
Sbjct: 121 DS 122


>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  218 bits (556), Expect = 5e-55
 Identities = 111/121 (91%), Positives = 115/121 (95%)
 Frame = -3

Query: 551 AYAAVKTATKPGYEEAQESLHKIRITLSSKNVKNLEKVCADLVRGAKDKTLRVKGPVRMP 372
           AYAA+K  TKPG EE+QE +HKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 2   AYAAMKP-TKPGLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMP 60

Query: 371 TKVLKITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 192
           TKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 191 D 189
           D
Sbjct: 121 D 121


>ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like [Glycine max]
          Length = 123

 Score =  218 bits (556), Expect = 5e-55
 Identities = 111/123 (90%), Positives = 116/123 (94%)
 Frame = -3

Query: 557 MAAYAAVKTATKPGYEEAQESLHKIRITLSSKNVKNLEKVCADLVRGAKDKTLRVKGPVR 378
           MA YAA+K  TKPG EE+QE +HKIRITLSSK+VKNLEKVCADLVRGAKDK LRVKGPVR
Sbjct: 1   MATYAAMKP-TKPGLEESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVR 59

Query: 377 MPTKVLKITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVT 198
           MPTKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVT
Sbjct: 60  MPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVT 119

Query: 197 IAD 189
           IAD
Sbjct: 120 IAD 122


>ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycine max]
           gi|255627607|gb|ACU14148.1| unknown [Glycine max]
          Length = 123

 Score =  217 bits (553), Expect = 1e-54
 Identities = 111/123 (90%), Positives = 115/123 (93%)
 Frame = -3

Query: 557 MAAYAAVKTATKPGYEEAQESLHKIRITLSSKNVKNLEKVCADLVRGAKDKTLRVKGPVR 378
           MA YAA+K  TKPG EE QE +HKIRITLSSK+VKNLEKVCADLVRGAKDK LRVKGPVR
Sbjct: 1   MATYAAMKP-TKPGLEEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVR 59

Query: 377 MPTKVLKITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVT 198
           MPTKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVT
Sbjct: 60  MPTKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVT 119

Query: 197 IAD 189
           IAD
Sbjct: 120 IAD 122


>ref|XP_004143650.1| PREDICTED: 40S ribosomal protein S20-2-like [Cucumis sativus]
           gi|449488600|ref|XP_004158106.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Cucumis sativus]
          Length = 121

 Score =  217 bits (552), Expect = 1e-54
 Identities = 111/121 (91%), Positives = 114/121 (94%)
 Frame = -3

Query: 551 AYAAVKTATKPGYEEAQESLHKIRITLSSKNVKNLEKVCADLVRGAKDKTLRVKGPVRMP 372
           AYAA+K  TKPG E+AQE +HKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMP
Sbjct: 2   AYAAMKP-TKPGLEDAQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 371 TKVLKITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIA 192
           TKVL ITTRKSPCGEGTNTWDRFELRVHKRVIDLFSS DVVKQITSITIEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIA 120

Query: 191 D 189
           D
Sbjct: 121 D 121


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