BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000162
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   110   2e-22
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...    79   8e-13

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  110 bits (276), Expect = 2e-22
 Identities = 58/118 (49%), Positives = 71/118 (60%)
 Frame = +1

Query: 310 KRALVFSGRRLMPVGLPEDHSTDPFASPLPRGPVPARRVVHVEPFTWDNMSYGQCSRTLA 489
           KR L FSGRRL   GLP    +DPFASP P  P    +V HV+P +W+ MS+GQCSR L 
Sbjct: 172 KRTLAFSGRRLSVSGLPS--GSDPFASPSPVRPALTPKVAHVDPVSWEGMSFGQCSRALT 229

Query: 490 LYKQLTSCFGSKMFQATLYKEAVKKVCKLTDAXXXXXXXXXXXXXQVDFGATPAHVYV 663
           LYKQL SCFG KMF ++LY  AV+KV +L +              QVD  A   H++V
Sbjct: 230 LYKQLCSCFGVKMFSSSLYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLFV 287


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score = 79.0 bits (193), Expect = 8e-13
 Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +1

Query: 310 KRALVFSGRRLMPVGLPEDHSTDPFASPLPR-GPVPARRVVHVEPFTWDNMSYGQCSRTL 486
           KRA  FSG+RL   GLPE     P  S L R       +  HV+P +W+ MS+GQCSR L
Sbjct: 172 KRAFAFSGKRLSVSGLPEG----PIPSLLLRQSACNCPKGCHVDPVSWEGMSFGQCSRAL 227

Query: 487 ALYKQLTSCFGSKMFQATLYKEAVKKVCKL 576
            LY+QL  CFG KMF ++LY  AV++   L
Sbjct: 228 TLYRQLCGCFGMKMFSSSLYGMAVRRFSAL 257