BLASTX nr result
ID: Cnidium21_contig00000055
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000055
(3740 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot... 1382 0.0
emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot v... 1079 0.0
gb|ADN88403.1| polyprotein [Strawberry latent ringspot virus] 920 0.0
gb|ADN88405.1| polyprotein [Strawberry latent ringspot virus] 919 0.0
gb|ADN88406.1| polyprotein [Strawberry latent ringspot virus] 917 0.0
>ref|YP_227368.1| 109 kDa polyprotein [Strawberry latent ringspot virus]
gi|58040999|gb|AAW63129.1| 109 kDa polyprotein
[Strawberry latent ringspot virus]
Length = 989
Score = 1382 bits (3578), Expect = 0.0
Identities = 677/992 (68%), Positives = 787/992 (79%)
Frame = -1
Query: 3407 SFFGRRSTQEMPNAPSYSAKEMEVLKAAITECGINYADVVRAAQTESGKMAILTAANTSQ 3228
SFF RRST EMP+ PSYS +EMEVLK+AITECGINYADVVRAAQTESGK+AILTAANT+
Sbjct: 3 SFFSRRSTPEMPSVPSYSPREMEVLKSAITECGINYADVVRAAQTESGKLAILTAANTNS 62
Query: 3227 LKSLIATTSTSNALARLKEKPKAVVHVSEGVGRQVLCDDKLTHQTTVVHTPEPLFKRMKE 3048
LKSL+ATT+T +A RL E PKA+VHV+EGVG+QVLCDDKLTHQTTVVHTP+ ++ M+
Sbjct: 63 LKSLVATTTTQSAFRRLSESPKAIVHVAEGVGKQVLCDDKLTHQTTVVHTPKKVYDHMRS 122
Query: 3047 KKLKNGKDTGGEEPKYRSADVCTIQLGVTSHLPGHSNQIAGVVLLDGNRSTQEQAVLGIG 2868
K+LK KDT EEPKYRSAD+CTIQLGVTSHL GHSNQIAG+VLLDGNR+TQEQAVLGIG
Sbjct: 123 KRLKKTKDTDEEEPKYRSADICTIQLGVTSHLSGHSNQIAGIVLLDGNRATQEQAVLGIG 182
Query: 2867 VLPLYEAHSHALFTPRLNIHYDDPNFVDRLQLLTTFSDGVLGGGSPAMSYSTISVVRHNI 2688
VLPLYEAHSHALF PRLNIHYDDPNFVDRLQLLTTFSD VLGGGSPAMSYSTISVVRHNI
Sbjct: 183 VLPLYEAHSHALFAPRLNIHYDDPNFVDRLQLLTTFSDDVLGGGSPAMSYSTISVVRHNI 242
Query: 2687 IDAHYLPEPLPYSKLKEKYPCGVRGLSNFQATEIAPLQPARLTRSASYMPIQHAGVKTVL 2508
DAH+LPEPLPYSKLKEKYP G++GLSNFQA EIAPLQPARLTRSASYMPI+ +G KTVL
Sbjct: 243 ADAHFLPEPLPYSKLKEKYPSGLKGLSNFQAAEIAPLQPARLTRSASYMPIRRSGAKTVL 302
Query: 2507 TFEDNVAQIKGQQPVQARASFSFANISYGQQDRAALPNPPPQKCQFHNKVGCPCAQHTGN 2328
TFEDN A ++ QQP+QARASFSF+ ISYGQQDRAALP P KC FHN+VGCPC QHTG
Sbjct: 303 TFEDNQASLREQQPLQARASFSFSGISYGQQDRAALPFAPSPKCSFHNRVGCPCKQHTGE 362
Query: 2327 TKASGNHHEELVPASEGGTEGQFFSPQPIAHPQDSRFVGSHPFSFPINSNVGTVVYTLPI 2148
+ASG HEELVPA+ GGTE FFSP+ I P ++FVGSHPFSFPINSNVGT VYTLP+
Sbjct: 363 AEASG-LHEELVPAASGGTEAIFFSPRSIPLPGSAKFVGSHPFSFPINSNVGTTVYTLPL 421
Query: 2147 MGTSLRDTEWGRFYKGYRYLRCKPTVRLVGSGPIQAKGLLWLCYDPSETLSKYPSRERAL 1968
+ TSL+DTEWGR+YK Y ++R KPTVRLV S PIQAKGLLWLCYDP ETL+KYPSRERAL
Sbjct: 422 IRTSLKDTEWGRYYKSYTFMRFKPTVRLVSSAPIQAKGLLWLCYDPCETLAKYPSRERAL 481
Query: 1967 ALQGTWFMPGRHDSASLTVQELATPAGFCDMDTDVNGAFKVVIIKDLSNFDVSDYGMELS 1788
LQGTWFMPGRHDS +LT+ ELATP+G+ M +D NGAFKVVIIKDL NF+V+D GMELS
Sbjct: 482 MLQGTWFMPGRHDSVTLTIDELATPSGYSIMTSDHNGAFKVVIIKDLENFEVADLGMELS 541
Query: 1787 LYLEVEKIGLGSVVTNETLTTFYPLRQVVLDYELSTTTPKGKAXXXXXXXXXPAHDEAQF 1608
L+L+V+ IG+G +F PLRQVV+D++LSTTTPKGKA P D AQ+
Sbjct: 542 LFLDVQDIGMGMGPEMPLTDSFLPLRQVVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQW 601
Query: 1607 YPSCSSSILENHRYWKGVLSLEVVFNLPAMAGGIVELAFAYDTYDNVDGDTYRRFGSSVV 1428
YPSCSSSILENHRYWKG L LEV+FNLPAM GG VE+ FA D+ + D YR FGS+VV
Sbjct: 602 YPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTVEMGFANDSCSGRESDAYRYFGSTVV 661
Query: 1427 DLRAHRILRARVPXXXXXXXXXXXXXXLFEVRPQTGSGDTLKLVVLFTAPLHIGGTSKKG 1248
DLRAHR+LRARVP LF V P T G +L+ V+LFTAPLHI T+KKG
Sbjct: 662 DLRAHRLLRARVPLHGYGGYLMGGSGSLFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKG 721
Query: 1247 SVLVRYLGLEDLDYLEPATSIGRLNPETTLVPNVAASGGPIVKVGTVEWEEPFISKVPLG 1068
SV+VRYLGLED +Y++P TS+GRLNP TTLV ASG P+V+VGT +W EP + ++PLG
Sbjct: 722 SVMVRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDWVEPPLFRLPLG 777
Query: 1067 LRQKTFRLMTINKWAPSGFLYFPVTPSVHLPRTAGNFVADLEQQCPLMHRSQENCQWRGT 888
L Q+ FRL+TI+KW SGFL+FP TPS H+P+ G F ++EQ PLMHRSQEN QW G+
Sbjct: 778 LLQRRFRLLTISKWPKSGFLFFPTTPSSHIPKLVGTFEGEVEQHSPLMHRSQENAQWSGS 837
Query: 887 LKYHLTARLEGATDQLILPHRSLTFSAVLLSKILPAPCFIDDSTFKPLLPLLSVKDTFSL 708
L Y+L+ R GAT Q +LP R + A +L I+ PCFI+ TF ++P+ ++T L
Sbjct: 838 LTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKPCFIEKDTFVQVMPMADPRETIYL 897
Query: 707 EQDHPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLHVRDVSLWVEPD 528
+ TPP RW NTHFGATE Y RTCP WVLLQFP + + L VRD+SLWVEP
Sbjct: 898 PTTDSVASYVTPPRRWVNTHFGATEMYGVRTCPAWVLLQFPNEEASHLGVRDISLWVEPK 957
Query: 527 IEYRHPMGGFPLTIPDPSPAPKYFFENTFVVG 432
+ +RH +GGFP+ P P+PA Y++ENTF VG
Sbjct: 958 VTFRHAVGGFPILKPTPAPAIDYYYENTFPVG 989
>emb|CAA54615.1| 98.8kD polyprotein [Strawberry latent ringspot virus]
Length = 890
Score = 1079 bits (2791), Expect = 0.0
Identities = 547/844 (64%), Positives = 636/844 (75%), Gaps = 2/844 (0%)
Frame = -1
Query: 3056 MKEKKLKNGKDTGGEEPKYRSADVCTIQLGVTSHLPGH--SNQIAGVVLLDGNRSTQEQA 2883
M+ K+LK KDT EEPKY V L SH+P SNQIAGVVLLDGNR+TQE A
Sbjct: 1 MESKRLKKTKDTDEEEPKYALMFV----LSTWSHVPSFWSSNQIAGVVLLDGNRATQETA 56
Query: 2882 VLGIGVLPLYEAHSHALFTPRLNIHYDDPNFVDRLQLLTTFSDGVLGGGSPAMSYSTISV 2703
VLGIGVLPLYEAHSHALF PRL I F DRLQLLTTFSD VLGGGSPAMSYSTISV
Sbjct: 57 VLGIGVLPLYEAHSHALFAPRL-ISTMMIEFCDRLQLLTTFSDVVLGGGSPAMSYSTISV 115
Query: 2702 VRHNIIDAHYLPEPLPYSKLKEKYPCGVRGLSNFQATEIAPLQPARLTRSASYMPIQHAG 2523
VRHN+ DAH+LPEPLPYSK KEK GV+GLSNFQA EIAPLQPARLTRSASYMPIQ +G
Sbjct: 116 VRHNVRDAHFLPEPLPYSKSKEK-TSGVKGLSNFQAAEIAPLQPARLTRSASYMPIQRSG 174
Query: 2522 VKTVLTFEDNVAQIKGQQPVQARASFSFANISYGQQDRAALPNPPPQKCQFHNKVGCPCA 2343
KTVLTFEDN A ++ QQP +ARASFSF+ +SYGQQDRAALP+ P KC FHN+VGCPC
Sbjct: 175 EKTVLTFEDNQASLREQQPFEARASFSFSGVSYGQQDRAALPSAPSPKCAFHNRVGCPCK 234
Query: 2342 QHTGNTKASGNHHEELVPASEGGTEGQFFSPQPIAHPQDSRFVGSHPFSFPINSNVGTVV 2163
QHTG +ASG H EELVPAS GGTE FFSP+ I P ++FVGSHPFSFPINSNVGT V
Sbjct: 235 QHTGEAEASGLH-EELVPASSGGTEAIFFSPKSIPLPGSAKFVGSHPFSFPINSNVGTTV 293
Query: 2162 YTLPIMGTSLRDTEWGRFYKGYRYLRCKPTVRLVGSGPIQAKGLLWLCYDPSETLSKYPS 1983
YTLP++ TSL+DTEWGR+Y+ Y ++R KPTVRLV S PIQAKGLLWLCYDP ETL+KYPS
Sbjct: 294 YTLPLIRTSLKDTEWGRYYRSYTFMRFKPTVRLVSSAPIQAKGLLWLCYDPCETLAKYPS 353
Query: 1982 RERALALQGTWFMPGRHDSASLTVQELATPAGFCDMDTDVNGAFKVVIIKDLSNFDVSDY 1803
RERAL LQGTWFMPGRHDS +LT+ ELATP+G+ M +D NGAFKVVIIKDL NF+V+D
Sbjct: 354 RERALMLQGTWFMPGRHDSVTLTIDELATPSGYSIMTSDHNGAFKVVIIKDLENFEVADL 413
Query: 1802 GMELSLYLEVEKIGLGSVVTNETLTTFYPLRQVVLDYELSTTTPKGKAXXXXXXXXXPAH 1623
GMELSL+L+V+ IG+G +F PLRQVV+D++LSTTTPKGKA P
Sbjct: 414 GMELSLFLDVQDIGMGMGPEMPLTDSFLPLRQVVVDFDLSTTTPKGKALVVPLNPLLPGF 473
Query: 1622 DEAQFYPSCSSSILENHRYWKGVLSLEVVFNLPAMAGGIVELAFAYDTYDNVDGDTYRRF 1443
D AQ+YPSCSSSILENHRYWKG L LEV+FNLPAM GG VE+ FA D+Y + D YR F
Sbjct: 474 DGAQWYPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTVEMGFANDSYSGWESDAYRYF 533
Query: 1442 GSSVVDLRAHRILRARVPXXXXXXXXXXXXXXLFEVRPQTGSGDTLKLVVLFTAPLHIGG 1263
GS+VVDLRAHR+LRA+VP LF V P T G +L+ V+LFTAPLHI
Sbjct: 534 GSTVVDLRAHRLLRAKVPLHGYGGYLMGGSGSLFAVPPLTDYGQSLRFVLLFTAPLHISD 593
Query: 1262 TSKKGSVLVRYLGLEDLDYLEPATSIGRLNPETTLVPNVAASGGPIVKVGTVEWEEPFIS 1083
T+K GSV+VRYLGLED +Y++P TS+GRLNP TTLV ASG P+V+VGT +W EP +
Sbjct: 594 TTKTGSVMVRYLGLEDCEYIQPTTSLGRLNPATTLV----ASGAPVVQVGTSDWVEPLLF 649
Query: 1082 KVPLGLRQKTFRLMTINKWAPSGFLYFPVTPSVHLPRTAGNFVADLEQQCPLMHRSQENC 903
++PLGL QK FRL+TI+KW SGFL+FP TPS H+P+ AG F ++EQ PLMHRSQEN
Sbjct: 650 RLPLGLLQKRFRLLTISKWPKSGFLFFPTTPSSHIPKLAGTFEGEVEQHSPLMHRSQENA 709
Query: 902 QWRGTLKYHLTARLEGATDQLILPHRSLTFSAVLLSKILPAPCFIDDSTFKPLLPLLSVK 723
QW G+L Y+L+ R GAT Q +LP R + A +L I+ PCFI+ TF ++P+ +
Sbjct: 710 QWSGSLTYYLSIRYSGATPQGVLPLRPVCLGATILDNIMGKPCFIEKDTFVQVMPMADPR 769
Query: 722 DTFSLEQDHPFVEFTTPPGRWTNTHFGATEQYTWRTCPVWVLLQFPPKTMAQLHVRDVSL 543
+T L + TPP RW NTHFGATE Y RTCP WVLLQFP + + L VRD+SL
Sbjct: 770 ETIYLPTTDSIASYETPPRRWVNTHFGATETYGVRTCPAWVLLQFPNEEASHLGVRDISL 829
Query: 542 WVEP 531
WVEP
Sbjct: 830 WVEP 833
>gb|ADN88403.1| polyprotein [Strawberry latent ringspot virus]
Length = 712
Score = 920 bits (2379), Expect = 0.0
Identities = 449/717 (62%), Positives = 538/717 (75%)
Frame = -1
Query: 2582 PLQPARLTRSASYMPIQHAGVKTVLTFEDNVAQIKGQQPVQARASFSFANISYGQQDRAA 2403
PLQPARLTRSASYMPIQ +G KTVLTFEDN A +K QQP+QARASFSF+ +SYGQ DRAA
Sbjct: 1 PLQPARLTRSASYMPIQRSGAKTVLTFEDNQASLKEQQPLQARASFSFSGVSYGQHDRAA 60
Query: 2402 LPNPPPQKCQFHNKVGCPCAQHTGNTKASGNHHEELVPASEGGTEGQFFSPQPIAHPQDS 2223
LP+ PPQKC FHN+VGCPC QHTG + SG H EELVPAS GGTE FFSP+ I P +
Sbjct: 61 LPSAPPQKCSFHNRVGCPCTQHTGEAEPSGLH-EELVPASSGGTEAIFFSPKSIPVPGSA 119
Query: 2222 RFVGSHPFSFPINSNVGTVVYTLPIMGTSLRDTEWGRFYKGYRYLRCKPTVRLVGSGPIQ 2043
+FVGSHPFSFPINSNVGT VY+LP++ TSL+DTEWGR+Y+ Y ++R KPTVRLV S PIQ
Sbjct: 120 KFVGSHPFSFPINSNVGTTVYSLPLISTSLKDTEWGRYYRSYTFMRFKPTVRLVSSAPIQ 179
Query: 2042 AKGLLWLCYDPSETLSKYPSRERALALQGTWFMPGRHDSASLTVQELATPAGFCDMDTDV 1863
AKGLLWLCYDP ETL+KYPSRERAL LQG WFMPGRHDS +LT+ ELATP+G+ M++D
Sbjct: 180 AKGLLWLCYDPCETLAKYPSRERALMLQGVWFMPGRHDSVTLTIDELATPSGYSIMNSDH 239
Query: 1862 NGAFKVVIIKDLSNFDVSDYGMELSLYLEVEKIGLGSVVTNETLTTFYPLRQVVLDYELS 1683
NGAFKVVIIKDL NF+V+D GMELSL+L+V+ IG+G +F PLRQVV+D++LS
Sbjct: 240 NGAFKVVIIKDLENFEVADLGMELSLFLDVQDIGMGIGPELPLTDSFLPLRQVVVDFDLS 299
Query: 1682 TTTPKGKAXXXXXXXXXPAHDEAQFYPSCSSSILENHRYWKGVLSLEVVFNLPAMAGGIV 1503
TTTPKGKA P D AQ+YPSCSSSILENHRYWKG L LEV+FNLPAM GG V
Sbjct: 300 TTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTV 359
Query: 1502 ELAFAYDTYDNVDGDTYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXXLFEVRPQT 1323
E+ FA ++Y + D YR FGS+VVDLRAHR+LRA+VP LF V P T
Sbjct: 360 EMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGSLFAVPPLT 419
Query: 1322 GSGDTLKLVVLFTAPLHIGGTSKKGSVLVRYLGLEDLDYLEPATSIGRLNPETTLVPNVA 1143
G +L+ V+LFTAPLHI +KKGSV++RYLGLED +Y++P TS+GRLNP TTLV
Sbjct: 420 DYGQSLRFVLLFTAPLHISDATKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV---- 475
Query: 1142 ASGGPIVKVGTVEWEEPFISKVPLGLRQKTFRLMTINKWAPSGFLYFPVTPSVHLPRTAG 963
ASG P+V+VGT +W EP + ++PLGL QK FRL+TI+KW SGFL+ P+TPS H+P+ AG
Sbjct: 476 ASGAPVVQVGTSDWVEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFLPMTPSSHIPKLAG 535
Query: 962 NFVADLEQQCPLMHRSQENCQWRGTLKYHLTARLEGATDQLILPHRSLTFSAVLLSKILP 783
F ++EQ PLMHRSQEN QW G+L Y+L+ R GAT Q +LP R + F A +L IL
Sbjct: 536 TFEGEVEQHSPLMHRSQENAQWCGSLTYYLSIRYSGATPQGVLPLRPVCFGATVLDNILG 595
Query: 782 APCFIDDSTFKPLLPLLSVKDTFSLEQDHPFVEFTTPPGRWTNTHFGATEQYTWRTCPVW 603
PCF++ TF ++P+ +T L + TPP RW NTHFGATE Y RTCP W
Sbjct: 596 KPCFVEKDTFIQVMPMADPGETVYLPTTESIAFYETPPRRWVNTHFGATESYGVRTCPAW 655
Query: 602 VLLQFPPKTMAQLHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFVVG 432
VLLQFP + + L VRDVSLWVEP+I YRH +GGFP+ P P PA Y++ENTF VG
Sbjct: 656 VLLQFPNEEASHLGVRDVSLWVEPNISYRHAVGGFPILKPTPPPAIDYYYENTFPVG 712
>gb|ADN88405.1| polyprotein [Strawberry latent ringspot virus]
Length = 712
Score = 919 bits (2376), Expect = 0.0
Identities = 449/717 (62%), Positives = 537/717 (74%)
Frame = -1
Query: 2582 PLQPARLTRSASYMPIQHAGVKTVLTFEDNVAQIKGQQPVQARASFSFANISYGQQDRAA 2403
PLQPARLTRSASYMPIQ +G KTVLTFEDN A +K QQP+QARASFSF+ +SYGQ DRAA
Sbjct: 1 PLQPARLTRSASYMPIQRSGAKTVLTFEDNQASLKEQQPLQARASFSFSGVSYGQHDRAA 60
Query: 2402 LPNPPPQKCQFHNKVGCPCAQHTGNTKASGNHHEELVPASEGGTEGQFFSPQPIAHPQDS 2223
LP+ PPQKC FHN+VGCPC QHTG + SG H EELVPAS GGTE FFSP+ I P +
Sbjct: 61 LPSAPPQKCSFHNRVGCPCTQHTGEAEPSGLH-EELVPASSGGTEAIFFSPKSIPVPGSA 119
Query: 2222 RFVGSHPFSFPINSNVGTVVYTLPIMGTSLRDTEWGRFYKGYRYLRCKPTVRLVGSGPIQ 2043
+FVGSHPFSFPINSNVGT VY+LP++ TSL+DTEWGR+Y+ Y ++R KPTVRLV S PIQ
Sbjct: 120 KFVGSHPFSFPINSNVGTTVYSLPLISTSLKDTEWGRYYRSYTFMRFKPTVRLVSSAPIQ 179
Query: 2042 AKGLLWLCYDPSETLSKYPSRERALALQGTWFMPGRHDSASLTVQELATPAGFCDMDTDV 1863
AKGLLWLCYDP ETL+KYPSRERAL LQG WFMPGRHDS +LT+ ELATP+G+ M++D
Sbjct: 180 AKGLLWLCYDPCETLAKYPSRERALMLQGVWFMPGRHDSVTLTIDELATPSGYSIMNSDH 239
Query: 1862 NGAFKVVIIKDLSNFDVSDYGMELSLYLEVEKIGLGSVVTNETLTTFYPLRQVVLDYELS 1683
NGAFKVVIIKDL NF+V+D GMELSL+L+V+ IG+G +F PLRQVV+D++LS
Sbjct: 240 NGAFKVVIIKDLENFEVADLGMELSLFLDVQDIGMGIGPELPLTDSFLPLRQVVVDFDLS 299
Query: 1682 TTTPKGKAXXXXXXXXXPAHDEAQFYPSCSSSILENHRYWKGVLSLEVVFNLPAMAGGIV 1503
TTTPKGKA P D AQ+YPSCSSSILENHRYWKG L LEV+FNLPAM GG V
Sbjct: 300 TTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTV 359
Query: 1502 ELAFAYDTYDNVDGDTYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXXLFEVRPQT 1323
E+ FA ++Y + D YR FGS+VVDLRAHR+LRA+VP LF V P T
Sbjct: 360 EMGFANNSYSGWESDAYRYFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGSLFAVPPLT 419
Query: 1322 GSGDTLKLVVLFTAPLHIGGTSKKGSVLVRYLGLEDLDYLEPATSIGRLNPETTLVPNVA 1143
G +L+ V+LFTAPLHI +KKGSV++RYLGLED +Y++P TS+GRLNP TTLV
Sbjct: 420 DYGQSLRFVLLFTAPLHISDATKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV---- 475
Query: 1142 ASGGPIVKVGTVEWEEPFISKVPLGLRQKTFRLMTINKWAPSGFLYFPVTPSVHLPRTAG 963
ASG P+V+VGT +W EP ++PLGL QK FRL+TI+KW SGFL+ P+TPS H+P+ AG
Sbjct: 476 ASGAPVVQVGTFDWVEPPSLRLPLGLLQKKFRLLTISKWPKSGFLFLPMTPSSHIPKLAG 535
Query: 962 NFVADLEQQCPLMHRSQENCQWRGTLKYHLTARLEGATDQLILPHRSLTFSAVLLSKILP 783
F ++EQ PLMHRSQEN QW G+L Y+L+ R GAT Q +LP R + F A +L IL
Sbjct: 536 TFEGEVEQHSPLMHRSQENAQWCGSLTYYLSIRYSGATPQGVLPLRPVCFGATVLDNILG 595
Query: 782 APCFIDDSTFKPLLPLLSVKDTFSLEQDHPFVEFTTPPGRWTNTHFGATEQYTWRTCPVW 603
PCF++ TF ++P+ +T L + TPP RW NTHFGATE Y RTCP W
Sbjct: 596 KPCFVEKDTFIQVMPMADPGETVYLPTTESIAFYETPPRRWVNTHFGATESYGVRTCPAW 655
Query: 602 VLLQFPPKTMAQLHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFVVG 432
VLLQFP + + L VRDVSLWVEP+I YRH +GGFP+ P P PA Y++ENTF VG
Sbjct: 656 VLLQFPNEEASHLGVRDVSLWVEPNISYRHAVGGFPILKPTPPPAIDYYYENTFPVG 712
>gb|ADN88406.1| polyprotein [Strawberry latent ringspot virus]
Length = 712
Score = 917 bits (2369), Expect = 0.0
Identities = 442/717 (61%), Positives = 540/717 (75%)
Frame = -1
Query: 2582 PLQPARLTRSASYMPIQHAGVKTVLTFEDNVAQIKGQQPVQARASFSFANISYGQQDRAA 2403
PLQPARLTRSASYMPIQ +G KTVLTFEDN A +K QQP+QARASFSF+ +SYGQQDRAA
Sbjct: 1 PLQPARLTRSASYMPIQRSGAKTVLTFEDNQASLKEQQPLQARASFSFSGVSYGQQDRAA 60
Query: 2402 LPNPPPQKCQFHNKVGCPCAQHTGNTKASGNHHEELVPASEGGTEGQFFSPQPIAHPQDS 2223
LP+ P KC FHN+VGCPC QHTG + SG H E+LVPA+ GGTE FFSP+ + P +
Sbjct: 61 LPSAPSPKCSFHNRVGCPCKQHTGEAEPSGLH-EDLVPAASGGTEAIFFSPKSVPVPGSA 119
Query: 2222 RFVGSHPFSFPINSNVGTVVYTLPIMGTSLRDTEWGRFYKGYRYLRCKPTVRLVGSGPIQ 2043
+FVGSHPFSFPINSNVGT VY+LP++ TSL+DTEWGR+Y+ Y ++R KPTVRL+ S PIQ
Sbjct: 120 KFVGSHPFSFPINSNVGTTVYSLPLISTSLKDTEWGRYYRSYTFMRFKPTVRLISSAPIQ 179
Query: 2042 AKGLLWLCYDPSETLSKYPSRERALALQGTWFMPGRHDSASLTVQELATPAGFCDMDTDV 1863
AKGLLWLCYDP ETL+KYPSRERAL LQG WFMPGRHDS +LT+ ELATP+G+ M++D
Sbjct: 180 AKGLLWLCYDPCETLAKYPSRERALMLQGVWFMPGRHDSVTLTIDELATPSGYSIMNSDH 239
Query: 1862 NGAFKVVIIKDLSNFDVSDYGMELSLYLEVEKIGLGSVVTNETLTTFYPLRQVVLDYELS 1683
NGAFKVVIIKDL NF+V+D GMELSL+L+V+ IG+G +F PLRQVV+D++LS
Sbjct: 240 NGAFKVVIIKDLENFEVADLGMELSLFLDVQDIGMGIGPELPLTDSFLPLRQVVVDFDLS 299
Query: 1682 TTTPKGKAXXXXXXXXXPAHDEAQFYPSCSSSILENHRYWKGVLSLEVVFNLPAMAGGIV 1503
TTTPKGKA P D AQ+YPSCSSSILENHRYWKG L LEV+FNLPAM GG V
Sbjct: 300 TTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWKGTLVLEVIFNLPAMGGGTV 359
Query: 1502 ELAFAYDTYDNVDGDTYRRFGSSVVDLRAHRILRARVPXXXXXXXXXXXXXXLFEVRPQT 1323
E+ FA ++Y + D YR FGS+VVDLRAHR+LRA+VP LF V P T
Sbjct: 360 EMGFANNSYSGWESDAYRHFGSTVVDLRAHRLLRAKVPLYGYGGYLMGGSGSLFAVPPLT 419
Query: 1322 GSGDTLKLVVLFTAPLHIGGTSKKGSVLVRYLGLEDLDYLEPATSIGRLNPETTLVPNVA 1143
G +L+ V+LFTAPLHI T+KKGSV++RYLGLED +Y++P TS+GRLNP TTLV
Sbjct: 420 DYGQSLRFVLLFTAPLHISDTTKKGSVMIRYLGLEDCEYIQPTTSLGRLNPATTLV---- 475
Query: 1142 ASGGPIVKVGTVEWEEPFISKVPLGLRQKTFRLMTINKWAPSGFLYFPVTPSVHLPRTAG 963
ASG P+V+VGT +W EP + ++PLGL QK FRL+TI+KW SGFL+FP+TPS H+P+ G
Sbjct: 476 ASGAPVVQVGTSDWMEPPLLRLPLGLLQKKFRLLTISKWPKSGFLFFPMTPSSHMPKLVG 535
Query: 962 NFVADLEQQCPLMHRSQENCQWRGTLKYHLTARLEGATDQLILPHRSLTFSAVLLSKILP 783
F ++EQ PLMHRSQEN QW G+L Y+L+ R GAT Q +LP R + F A +L IL
Sbjct: 536 TFEGEVEQHSPLMHRSQENAQWCGSLTYYLSIRYSGATPQGVLPMRPVCFGATVLDNILG 595
Query: 782 APCFIDDSTFKPLLPLLSVKDTFSLEQDHPFVEFTTPPGRWTNTHFGATEQYTWRTCPVW 603
PCF++ TF ++P+ ++T L + TPP RW NTHFGATE Y RTCP W
Sbjct: 596 KPCFVEKDTFIQVMPMADPRETIYLPTTESVAFYETPPRRWVNTHFGATESYGVRTCPAW 655
Query: 602 VLLQFPPKTMAQLHVRDVSLWVEPDIEYRHPMGGFPLTIPDPSPAPKYFFENTFVVG 432
VLLQFP + + L VRD+SLWVEP+I +RH +GGFP+ P P+P+ Y++ENTF VG
Sbjct: 656 VLLQFPNEEASHLGVRDISLWVEPNISFRHAVGGFPILKPTPAPSIDYYYENTFPVG 712