BLASTX nr result

ID: Cnidium21_contig00000050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000050
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...    56   3e-06

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -3

Query: 307 SCFGSKMFQETLYKEAVKKVCKLTDAVPVSIPEFMGRLGQVDFGAAPAHVY 155
           SCFG KMF  +LY  AV+KV +L +  PV+IPE   RLGQVD  A   H++
Sbjct: 236 SCFGVKMFSSSLYGMAVRKVLRLREDFPVAIPENFARLGQVDRDARAVHLF 286


Top