BLASTX nr result

ID: Cnidium21_contig00000035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000035
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]       90   2e-16
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]       88   7e-16
emb|CBI27170.3| unnamed protein product [Vitis vinifera]               81   9e-14
ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
gb|ABK95033.1| unknown [Populus trichocarpa]                           76   4e-12

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/116 (43%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
 Frame = -3

Query: 533 EVAEVLEIRCLQIDGKYEANKLKEGLFYEVHYVVMLKDNHTITTPVKLVLTLPNGIKHES 354
           + AE++E+  LQIDG Y A  L +G+ Y V++VV L  N  +  PV L LT PNG   E 
Sbjct: 61  DAAELIEVCWLQIDGTYNARNLNKGVKYGVYFVVELNSNPCMNGPVTLKLTRPNGSPEEH 120

Query: 353 TKNLTEEPRNQMIGLKLGHF--LAKNLSGDIKFSLME-NGSAQKRGLVIIGALIVP 195
            ++L  +PRN+ +GLK+G F   A      +KFS+   +G+  K GL +IGA IVP
Sbjct: 121 KEDLQTKPRNKWVGLKVGEFTNTASGCDNTVKFSMNGCDGTTWKTGLTVIGAAIVP 176


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score = 88.2 bits (217), Expect = 7e-16
 Identities = 48/116 (41%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
 Frame = -3

Query: 533 EVAEVLEIRCLQIDGKYEANKLKEGLFYEVHYVVMLKDNHTITTPVKLVLTLPNGIKHES 354
           +V+E++E+  LQIDGKY A+KL +G+ Y V+++V LK N  +   V L LT P+G    +
Sbjct: 64  DVSELIEVCWLQIDGKYSASKLNQGVKYGVYFIVKLKTNLRLNGKVTLKLTRPDGRTVVT 123

Query: 353 TKNLTEEPRNQMIGLKLGHFL--AKNLSGDIKFSLME-NGSAQKRGLVIIGALIVP 195
             +L + P+N  + LK+G F+  A+    ++KFS+   +G++ K GLV+IGA+IVP
Sbjct: 124 RDDLDKRPKNTWVALKVGEFMTNARTCHRNVKFSMNGCDGTSWKSGLVVIGAVIVP 179


>emb|CBI27170.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 4/117 (3%)
 Frame = -3

Query: 533 EVAEVLEIRCLQIDGKYEANKLKEGLFYEVHYVVMLKD-NHTITTPVKLVLTLPNGIKHE 357
           +VAE++ +  L++ GK+E  KL  G+ Y+V +VVM+KD  +    PV L L LP+G   E
Sbjct: 122 DVAELINVCWLEVHGKFETAKLSPGIMYKVAFVVMMKDPAYGWGVPVNLKLALPDGNTQE 181

Query: 356 STKNLTEEPRNQMIGLKLGHF--LAKNLSGDIKFSLME-NGSAQKRGLVIIGALIVP 195
             +NL E+P+ Q I + +G F   A+N+ G+I+FSL E  G   K GLV+ G +I P
Sbjct: 182 HKENLREKPKGQWIEIPVGQFQTSAENI-GEIEFSLFEYEGGDWKSGLVVKGVIIQP 237


>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 50/121 (41%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
 Frame = -3

Query: 545 GDVN-EVAEVLEIRCLQIDGKYEANKLKEGLFYEVHYVVMLKD-NHTITTPVKLVLTLPN 372
           GDV  +VAE+L++  L+I GK+    L  G+ YEV +V+ LKD  +    PV + L LPN
Sbjct: 158 GDVTVDVAELLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPN 217

Query: 371 GIKHESTKNLTEEPRNQMIGLKLGHFLAKNLS-GDIKFSLME-NGSAQKRGLVIIGALIV 198
           G K E  + L  +PR Q I + +G F+    + G+I+F + E +G   KRGLVI G  I 
Sbjct: 218 GYKQERKEKLQTKPREQWIEVPVGEFITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIR 277

Query: 197 P 195
           P
Sbjct: 278 P 278


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
 Frame = -3

Query: 545 GDVN-EVAEVLEIRCLQIDGKYEANKLKEGLFYEVHYVVMLKD-NHTITTPVKLVLTLPN 372
           GDV  +VAE+L++  L+I GK+    L  G+ YEV +V+ LKD  +    PV + L LPN
Sbjct: 158 GDVTVDVAELLDVCWLEIYGKFNTKMLSPGILYEVVFVIKLKDPAYGWGVPVNVSLVLPN 217

Query: 371 GIKHESTKNLTEEPRNQMIGLKLGHFLAKNLS-GDIKFSLME-NGSAQKRGLVIIGALIV 198
           G K E  + L  +PR Q I + +G  +    + G+I+F + E +G   KRGLVI G  I 
Sbjct: 218 GYKQERKEKLQTKPREQWIEVPVGELITSPENVGEIQFGMHEYDGGEWKRGLVIKGIAIR 277

Query: 197 P 195
           P
Sbjct: 278 P 278


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