BLASTX nr result
ID: Cnidium21_contig00000034
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00000034 (381 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein ... 100 2e-28 emb|CBI32637.3| unnamed protein product [Vitis vinifera] 100 2e-28 ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|2... 97 4e-27 ref|XP_002871513.1| PDE149 [Arabidopsis lyrata subsp. lyrata] gi... 92 1e-25 ref|NP_568257.1| TerC integral membrane domain-containing protei... 92 2e-25 >ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein STKORF319-like [Vitis vinifera] Length = 389 Score = 100 bits (248), Expect(2) = 2e-28 Identities = 50/53 (94%), Positives = 53/53 (100%) Frame = +2 Query: 2 VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160 VDSIPAVFGVTRDPFIVF+SN+FAILGLRSLYTLISESMS+LEYLQPSIGVVL Sbjct: 295 VDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVL 347 Score = 50.8 bits (120), Expect(2) = 2e-28 Identities = 23/29 (79%), Positives = 26/29 (89%) Frame = +1 Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339 DFFG+H+STE SLG VAT+LG GVLLSLM Sbjct: 357 DFFGFHVSTEASLGFVATSLGAGVLLSLM 385 >emb|CBI32637.3| unnamed protein product [Vitis vinifera] Length = 365 Score = 100 bits (248), Expect(2) = 2e-28 Identities = 50/53 (94%), Positives = 53/53 (100%) Frame = +2 Query: 2 VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160 VDSIPAVFGVTRDPFIVF+SN+FAILGLRSLYTLISESMS+LEYLQPSIGVVL Sbjct: 271 VDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVL 323 Score = 50.8 bits (120), Expect(2) = 2e-28 Identities = 23/29 (79%), Positives = 26/29 (89%) Frame = +1 Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339 DFFG+H+STE SLG VAT+LG GVLLSLM Sbjct: 333 DFFGFHVSTEASLGFVATSLGAGVLLSLM 361 >ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|222833348|gb|EEE71825.1| predicted protein [Populus trichocarpa] Length = 372 Score = 97.4 bits (241), Expect(2) = 4e-27 Identities = 48/53 (90%), Positives = 51/53 (96%) Frame = +2 Query: 2 VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160 VDSIPAVFGVTRDPFIVFSSN+FAILGLRSLYTLISE M+DLEYLQPSI +VL Sbjct: 278 VDSIPAVFGVTRDPFIVFSSNLFAILGLRSLYTLISEGMADLEYLQPSIAIVL 330 Score = 48.9 bits (115), Expect(2) = 4e-27 Identities = 23/29 (79%), Positives = 25/29 (86%) Frame = +1 Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339 DF G+HISTE SLG VAT+LG GVLLSLM Sbjct: 340 DFMGFHISTEASLGFVATSLGAGVLLSLM 368 >ref|XP_002871513.1| PDE149 [Arabidopsis lyrata subsp. lyrata] gi|297317350|gb|EFH47772.1| PDE149 [Arabidopsis lyrata subsp. lyrata] Length = 374 Score = 92.4 bits (228), Expect(2) = 1e-25 Identities = 46/53 (86%), Positives = 49/53 (92%) Frame = +2 Query: 2 VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160 VDSIPAVFGVTRDPFIV +SN+FAILGLRSLYTLISE M +LEYLQPSI VVL Sbjct: 278 VDSIPAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVL 330 Score = 49.3 bits (116), Expect(2) = 1e-25 Identities = 22/28 (78%), Positives = 26/28 (92%) Frame = +1 Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSL 336 DFFG+H+STE SLGVVA +LGTGV+LSL Sbjct: 340 DFFGFHVSTEASLGVVALSLGTGVVLSL 367 >ref|NP_568257.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] gi|332004383|gb|AED91766.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] Length = 384 Score = 92.4 bits (228), Expect(2) = 2e-25 Identities = 46/53 (86%), Positives = 49/53 (92%) Frame = +2 Query: 2 VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160 VDSIPAVFGVTRDPFIV +SN+FAILGLRSLYTLISE M +LEYLQPSI VVL Sbjct: 288 VDSIPAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVL 340 Score = 48.5 bits (114), Expect(2) = 2e-25 Identities = 23/28 (82%), Positives = 25/28 (89%) Frame = +1 Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSL 336 DFFG+HISTE SLGVVA +L TGVLLSL Sbjct: 350 DFFGFHISTEASLGVVALSLSTGVLLSL 377