BLASTX nr result

ID: Cnidium21_contig00000034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000034
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein ...   100   2e-28
emb|CBI32637.3| unnamed protein product [Vitis vinifera]              100   2e-28
ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|2...    97   4e-27
ref|XP_002871513.1| PDE149 [Arabidopsis lyrata subsp. lyrata] gi...    92   1e-25
ref|NP_568257.1| TerC integral membrane domain-containing protei...    92   2e-25

>ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein STKORF319-like [Vitis
           vinifera]
          Length = 389

 Score =  100 bits (248), Expect(2) = 2e-28
 Identities = 50/53 (94%), Positives = 53/53 (100%)
 Frame = +2

Query: 2   VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160
           VDSIPAVFGVTRDPFIVF+SN+FAILGLRSLYTLISESMS+LEYLQPSIGVVL
Sbjct: 295 VDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVL 347



 Score = 50.8 bits (120), Expect(2) = 2e-28
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339
           DFFG+H+STE SLG VAT+LG GVLLSLM
Sbjct: 357 DFFGFHVSTEASLGFVATSLGAGVLLSLM 385


>emb|CBI32637.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  100 bits (248), Expect(2) = 2e-28
 Identities = 50/53 (94%), Positives = 53/53 (100%)
 Frame = +2

Query: 2   VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160
           VDSIPAVFGVTRDPFIVF+SN+FAILGLRSLYTLISESMS+LEYLQPSIGVVL
Sbjct: 271 VDSIPAVFGVTRDPFIVFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVL 323



 Score = 50.8 bits (120), Expect(2) = 2e-28
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339
           DFFG+H+STE SLG VAT+LG GVLLSLM
Sbjct: 333 DFFGFHVSTEASLGFVATSLGAGVLLSLM 361


>ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|222833348|gb|EEE71825.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 97.4 bits (241), Expect(2) = 4e-27
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +2

Query: 2   VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160
           VDSIPAVFGVTRDPFIVFSSN+FAILGLRSLYTLISE M+DLEYLQPSI +VL
Sbjct: 278 VDSIPAVFGVTRDPFIVFSSNLFAILGLRSLYTLISEGMADLEYLQPSIAIVL 330



 Score = 48.9 bits (115), Expect(2) = 4e-27
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +1

Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSLM 339
           DF G+HISTE SLG VAT+LG GVLLSLM
Sbjct: 340 DFMGFHISTEASLGFVATSLGAGVLLSLM 368


>ref|XP_002871513.1| PDE149 [Arabidopsis lyrata subsp. lyrata]
           gi|297317350|gb|EFH47772.1| PDE149 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 374

 Score = 92.4 bits (228), Expect(2) = 1e-25
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160
           VDSIPAVFGVTRDPFIV +SN+FAILGLRSLYTLISE M +LEYLQPSI VVL
Sbjct: 278 VDSIPAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVL 330



 Score = 49.3 bits (116), Expect(2) = 1e-25
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = +1

Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSL 336
           DFFG+H+STE SLGVVA +LGTGV+LSL
Sbjct: 340 DFFGFHVSTEASLGVVALSLGTGVVLSL 367


>ref|NP_568257.1| TerC integral membrane domain-containing protein [Arabidopsis
           thaliana] gi|332004383|gb|AED91766.1| TerC integral
           membrane domain-containing protein [Arabidopsis
           thaliana]
          Length = 384

 Score = 92.4 bits (228), Expect(2) = 2e-25
 Identities = 46/53 (86%), Positives = 49/53 (92%)
 Frame = +2

Query: 2   VDSIPAVFGVTRDPFIVFSSNIFAILGLRSLYTLISESMSDLEYLQPSIGVVL 160
           VDSIPAVFGVTRDPFIV +SN+FAILGLRSLYTLISE M +LEYLQPSI VVL
Sbjct: 288 VDSIPAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVL 340



 Score = 48.5 bits (114), Expect(2) = 2e-25
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +1

Query: 253 DFFGYHISTEVSLGVVATTLGTGVLLSL 336
           DFFG+HISTE SLGVVA +L TGVLLSL
Sbjct: 350 DFFGFHISTEASLGVVALSLSTGVLLSL 377


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