BLASTX nr result

ID: Cnidium21_contig00000016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000016
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272794.1| PREDICTED: uncharacterized protein LOC100244...    76   1e-11
emb|CBI39789.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_003551407.1| PREDICTED: uncharacterized protein LOC100817...    65   2e-08
ref|NP_001236397.1| uncharacterized protein LOC100306022 [Glycin...    64   5e-08
ref|NP_564712.1| embryo defective 1303 protein [Arabidopsis thal...    63   7e-08

>ref|XP_002272794.1| PREDICTED: uncharacterized protein LOC100244627 isoform 1 [Vitis
           vinifera] gi|225462007|ref|XP_002272826.1| PREDICTED:
           uncharacterized protein LOC100244627 isoform 2 [Vitis
           vinifera]
          Length = 170

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 52/112 (46%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
 Frame = +2

Query: 131 MTSLIANSVASPGALPPVSAVSRQTK---PIEHTSLRCSSLRADNDSLKFCSLSTY-LSD 298
           M+SL A+++A P   P       Q K   P+     R S       ++    L    LS 
Sbjct: 1   MSSLTASAIAIPAKRPLEGECRGQIKILGPVPVGLYRQSLSFGGTQAISPVVLYRQSLSF 60

Query: 299 GR-RVISLSSQRSASVICAAALNARCSAEQTQTVTRQSSTITVAPIQGKEKS 451
           GR + I+ + ++SAS+ICA+ALNARC AEQTQTVTR+SSTIT+AP QGKEKS
Sbjct: 61  GRTQAIAHTRKQSASLICASALNARCGAEQTQTVTRESSTITIAPTQGKEKS 112


>emb|CBI39789.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 39/55 (70%), Positives = 48/55 (87%), Gaps = 1/55 (1%)
 Frame = +2

Query: 290 LSDGR-RVISLSSQRSASVICAAALNARCSAEQTQTVTRQSSTITVAPIQGKEKS 451
           LS GR + I+ + ++SAS+ICA+ALNARC AEQTQTVTR+SSTIT+AP QGKEKS
Sbjct: 105 LSFGRTQAIAHTRKQSASLICASALNARCGAEQTQTVTRESSTITIAPTQGKEKS 159


>ref|XP_003551407.1| PREDICTED: uncharacterized protein LOC100817121 [Glycine max]
          Length = 159

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +2

Query: 140 LIANSVASPGALPPVSAVSRQTKPIEHTSLRCSS----LRADNDSLKFCSLSTYLSDGRR 307
           L  +++AS   LPPV    R    IE   +   S    L+  N+S+   S  T    GRR
Sbjct: 2   LAISAIASLPVLPPVR---RGGHCIEQNVVSTLSFPRRLQTTNNSISLSS--TQFPFGRR 56

Query: 308 VISLSSQRSASVICAAALNARCSAEQTQTVTRQSSTITVAPIQGKEKS 451
                S + A++ICAAALNARC AEQTQTVTRQ+ TIT  P  GKEKS
Sbjct: 57  A---RSTQPATIICAAALNARCGAEQTQTVTRQAPTITHVP--GKEKS 99


>ref|NP_001236397.1| uncharacterized protein LOC100306022 [Glycine max]
           gi|255627307|gb|ACU13998.1| unknown [Glycine max]
          Length = 159

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 50/108 (46%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
 Frame = +2

Query: 140 LIANSVASPGALPPVSAVSRQTKPIEHTSLRCSS----LRADNDSLKFCSLSTYLSDGRR 307
           L  ++VAS   LPPV    R    IE   +   S    L   N+S+      T    GRR
Sbjct: 2   LATSAVASLPVLPPVR---RGGHHIEQNVVSTLSFPRRLLTTNNSIPLSG--TQFPFGRR 56

Query: 308 VISLSSQRSASVICAAALNARCSAEQTQTVTRQSSTITVAPIQGKEKS 451
                S  +A++ICAAALNARC AEQTQTVTRQ+ TIT  P  GKEKS
Sbjct: 57  A---HSTHTATIICAAALNARCGAEQTQTVTRQAPTITHVP--GKEKS 99


>ref|NP_564712.1| embryo defective 1303 protein [Arabidopsis thaliana]
           gi|12321755|gb|AAG50915.1|AC069159_16 unknown protein
           [Arabidopsis thaliana] gi|17979541|gb|AAL50105.1|
           At1g56200/F14G9_26 [Arabidopsis thaliana]
           gi|20334908|gb|AAM16210.1| At1g56200/F14G9_26
           [Arabidopsis thaliana] gi|21537372|gb|AAM61713.1|
           unknown [Arabidopsis thaliana]
           gi|332195237|gb|AEE33358.1| embryo defective 1303
           protein [Arabidopsis thaliana]
          Length = 154

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 38/91 (41%), Positives = 53/91 (58%)
 Frame = +2

Query: 179 PVSAVSRQTKPIEHTSLRCSSLRADNDSLKFCSLSTYLSDGRRVISLSSQRSASVICAAA 358
           P+S  S   KP  H+S     +++ N      ++   LS G     L S+R + +IC +A
Sbjct: 12  PLSFNSNNAKPRIHSSGSLGGIKSQNRVSPLSAVG--LSSG-----LGSRRKSLLICHSA 64

Query: 359 LNARCSAEQTQTVTRQSSTITVAPIQGKEKS 451
           +NA+CS  QTQTVTR+S TIT AP+  KEKS
Sbjct: 65  INAKCSEGQTQTVTRESPTITQAPVHSKEKS 95


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