BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000009
         (1127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [...   435   e-119
ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [V...   427   e-117
ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-li...   420   e-115
gb|AFK42116.1| unknown [Lotus japonicus]                              417   e-114
ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis tha...   416   e-114

>ref|XP_002527995.1| proteasome subunit beta type 6,9, putative [Ricinus communis]
            gi|223532621|gb|EEF34407.1| proteasome subunit beta type
            6,9, putative [Ricinus communis]
          Length = 231

 Score =  435 bits (1118), Expect = e-119
 Identities = 213/231 (92%), Positives = 224/231 (96%)
 Frame = -2

Query: 1042 MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 863
            MDL APHSMGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSAA
Sbjct: 1    MDLKAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 60

Query: 862  DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGGK 683
            DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKNML+TG+IVGGWDKY+GGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLISYNNKNMLETGLIVGGWDKYDGGK 120

Query: 682  IYGVPLGGTIIEQPFAIXXXXXSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS 503
            IYG+PLGGTIIEQPFAI     SYLYGFFDQAWKEGMTKDEAEQLVVKAVSLA+ARDGAS
Sbjct: 121  IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAMARDGAS 180

Query: 502  GGVVRTVIINSDGVTRNFYPGDTLPLWHEELEPQNSLLDILNAPAPEPMNI 350
            GGVVRTVIINS+GVTRNFYPGD+LPLWHEELEPQNSLLDILNA +PEPMNI
Sbjct: 181  GGVVRTVIINSEGVTRNFYPGDSLPLWHEELEPQNSLLDILNASSPEPMNI 231


>ref|XP_002283195.1| PREDICTED: proteasome subunit beta type-6 [Vitis vinifera]
          Length = 231

 Score =  427 bits (1099), Expect = e-117
 Identities = 207/231 (89%), Positives = 223/231 (96%)
 Frame = -2

Query: 1042 MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 863
            MDLNAPH+MGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA
Sbjct: 1    MDLNAPHTMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSAA 60

Query: 862  DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGGK 683
            DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRL+SYNNKNML+TG+IVGGWDKYEGGK
Sbjct: 61   DSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLVSYNNKNMLETGLIVGGWDKYEGGK 120

Query: 682  IYGVPLGGTIIEQPFAIXXXXXSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS 503
            IY +PLGGTIIEQPFAI     +YLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS
Sbjct: 121  IYAIPLGGTIIEQPFAIGGSGSTYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGAS 180

Query: 502  GGVVRTVIINSDGVTRNFYPGDTLPLWHEELEPQNSLLDILNAPAPEPMNI 350
            GGV+RTVIINS+GVTRNFYPGD+LPLWHEEL PQNSLL++L++ +PEPMN+
Sbjct: 181  GGVIRTVIINSEGVTRNFYPGDSLPLWHEELPPQNSLLELLHSSSPEPMNV 231


>ref|XP_004138776.1| PREDICTED: proteasome subunit beta type-6-like [Cucumis sativus]
            gi|449499516|ref|XP_004160837.1| PREDICTED: proteasome
            subunit beta type-6-like [Cucumis sativus]
          Length = 235

 Score =  420 bits (1079), Expect = e-115
 Identities = 204/232 (87%), Positives = 221/232 (95%)
 Frame = -2

Query: 1045 NMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 866
            NMDLNAPHSMGTTIIGVTY GGVVLGADSRTSTG+YVANRASDKIT+LTDNVY+CRSGSA
Sbjct: 4    NMDLNAPHSMGTTIIGVTYKGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSA 63

Query: 865  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGG 686
            ADSQ+VSDYVRYFLHQHTIQLGQPATVKVAANLVRLL+Y+NKNMLQTG+IVGGWDKY+GG
Sbjct: 64   ADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLAYSNKNMLQTGLIVGGWDKYDGG 123

Query: 685  KIYGVPLGGTIIEQPFAIXXXXXSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGA 506
            +IYG+PLGGTIIEQPFAI     SYLYGFFDQAWKE M+++EAEQLVVKAVSLAIARDGA
Sbjct: 124  RIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEEMSREEAEQLVVKAVSLAIARDGA 183

Query: 505  SGGVVRTVIINSDGVTRNFYPGDTLPLWHEELEPQNSLLDILNAPAPEPMNI 350
            SGGVVRTV INS+GVTR FYPGD LPLWHEELEP+NSLLD+LNA +PEPMNI
Sbjct: 184  SGGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235


>gb|AFK42116.1| unknown [Lotus japonicus]
          Length = 233

 Score =  417 bits (1072), Expect = e-114
 Identities = 206/232 (88%), Positives = 219/232 (94%)
 Frame = -2

Query: 1045 NMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 866
            N DL+APHSMGTTIIGVTY+GGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSGSA
Sbjct: 4    NFDLSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSA 63

Query: 865  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGG 686
            ADSQ+VSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKN L+TG+IVGGWDKYEGG
Sbjct: 64   ADSQVVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGG 123

Query: 685  KIYGVPLGGTIIEQPFAIXXXXXSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGA 506
            +I+GVPLGGTI++QPFAI     SYLYGFFDQAWK+GMTKDEAE LV KAVSLAIARDGA
Sbjct: 124  QIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKDGMTKDEAEDLVKKAVSLAIARDGA 183

Query: 505  SGGVVRTVIINSDGVTRNFYPGDTLPLWHEELEPQNSLLDILNAPAPEPMNI 350
            SGGVVRTVIINS+GVTRNFYPGD LPLWHEELEPQNSLLDIL   APEPMNI
Sbjct: 184  SGGVVRTVIINSEGVTRNFYPGDQLPLWHEELEPQNSLLDILG--APEPMNI 233


>ref|NP_194858.1| proteasome subunit beta type-6 [Arabidopsis thaliana]
            gi|334187059|ref|NP_001190879.1| proteasome subunit beta
            type-6 [Arabidopsis thaliana]
            gi|82581522|sp|Q8LD27.2|PSB6_ARATH RecName:
            Full=Proteasome subunit beta type-6; AltName: Full=20S
            proteasome beta subunit A-1; AltName: Full=Proteasome
            component D; AltName: Full=Proteasome subunit beta
            type-1; Flags: Precursor gi|2511594|emb|CAA74028.1|
            multicatalytic endopeptidase complex, proteasome
            precursor, beta subunit [Arabidopsis thaliana]
            gi|2827525|emb|CAA16533.1| multicatalytic endopeptidase
            complex, proteasome precursor, beta subunit [Arabidopsis
            thaliana] gi|3421099|gb|AAC32065.1| 20S proteasome
            subunit PBA1 [Arabidopsis thaliana]
            gi|7270032|emb|CAB79848.1| multicatalytic endopeptidase
            complex, proteasome precursor, beta subunit [Arabidopsis
            thaliana] gi|15450505|gb|AAK96545.1| AT4g31300/F8F16_120
            [Arabidopsis thaliana] gi|16323318|gb|AAL15414.1|
            AT4g31300/F8F16_120 [Arabidopsis thaliana]
            gi|332660487|gb|AEE85887.1| proteasome subunit beta
            type-6 [Arabidopsis thaliana] gi|332660489|gb|AEE85889.1|
            proteasome subunit beta type-6 [Arabidopsis thaliana]
          Length = 233

 Score =  416 bits (1070), Expect = e-114
 Identities = 201/230 (87%), Positives = 219/230 (95%)
 Frame = -2

Query: 1045 NMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGMYVANRASDKITQLTDNVYICRSGSA 866
            +++L+APHSMGTTIIGVTY+GGVVLGADSRTSTGMYVANRASDKITQLTDNVY+CRSGSA
Sbjct: 2    DLNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSA 61

Query: 865  ADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNMLQTGIIVGGWDKYEGG 686
            ADSQ+VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKNMLQTG+IVGGWDKYEGG
Sbjct: 62   ADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGG 121

Query: 685  KIYGVPLGGTIIEQPFAIXXXXXSYLYGFFDQAWKEGMTKDEAEQLVVKAVSLAIARDGA 506
            KIYG+PLGGT++EQPFAI     SYLYGFFDQAWK+ MTK+EAEQLVVKAVSLAIARDGA
Sbjct: 122  KIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGA 181

Query: 505  SGGVVRTVIINSDGVTRNFYPGDTLPLWHEELEPQNSLLDILNAPAPEPM 356
            SGGVVRTVIINS+GVTRNFYPGD L LWHEELEPQNSLLDILNA  PEPM
Sbjct: 182  SGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231