BLASTX nr result

ID: Cinnamomum25_contig00042412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00042412
         (220 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A...    58   3e-06
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...    57   5e-06

>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 459

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
 Frame = -2

Query: 213 NGNIESCLHLFVNCPFV*DC*LQCGKGLNGGMETSFLEWLKALFCRCSEDKC-RAAMILW 37
           N + E+ LHL V+CPF   C ++   G  G + +SF +WL+ALF  C+ ++C  A M+ W
Sbjct: 215 NFDKETVLHLLVDCPFARSCWIKSKVGFFG-IYSSFKDWLQALFRNCTNEQCWIAVMVCW 273

Query: 36  SLWKGRNDIL 7
            LW  RN+++
Sbjct: 274 KLWCNRNNLV 283


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = -2

Query: 216 CNGNIESCLHLFVNCPFV*DC*LQCGKGLNGGMETSFLEWLKALFCRCSEDKC-RAAMIL 40
           CN   E   H  VNC F   C L    G  GG E +F++WL+ +F R S D C  AAM  
Sbjct: 240 CNAYDEIVAHCLVNCSFAKSCWLLSPIGYVGGCE-NFMDWLEGIFSRYSSDDCDLAAMTC 298

Query: 39  WSLWKGRN 16
           WSLW+ +N
Sbjct: 299 WSLWENKN 306