BLASTX nr result

ID: Cinnamomum25_contig00042372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00042372
         (258 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007039131.1| RNA-binding family protein isoform 2 [Theobr...    77   3e-12
ref|XP_007039130.1| RNA-binding family protein isoform 1 [Theobr...    77   3e-12
gb|KDO59665.1| hypothetical protein CISIN_1g0266482mg [Citrus si...    77   6e-12
gb|KDO59663.1| hypothetical protein CISIN_1g0266482mg, partial [...    77   6e-12
gb|KDO59660.1| hypothetical protein CISIN_1g0266482mg [Citrus si...    77   6e-12
ref|XP_006491965.1| PREDICTED: U1 small nuclear ribonucleoprotei...    77   6e-12
ref|XP_006491964.1| PREDICTED: U1 small nuclear ribonucleoprotei...    77   6e-12
ref|XP_006441172.1| hypothetical protein CICLE_v10022008mg [Citr...    77   6e-12
ref|XP_006441170.1| hypothetical protein CICLE_v10022008mg [Citr...    77   6e-12
ref|XP_007218305.1| hypothetical protein PRUPE_ppa010843mg [Prun...    75   1e-11
ref|XP_008343802.1| PREDICTED: uncharacterized protein LOC103406...    74   3e-11
ref|XP_008234694.1| PREDICTED: U1 small nuclear ribonucleoprotei...    74   4e-11
ref|XP_010109223.1| hypothetical protein L484_011845 [Morus nota...    74   5e-11
gb|KHF97932.1| RNA-binding with multiple splicing [Gossypium arb...    74   5e-11
ref|XP_012488614.1| PREDICTED: protein MATERNALLY EXPRESSED GENE...    73   7e-11
ref|XP_012488612.1| PREDICTED: uncharacterized protein LOC105801...    73   7e-11
ref|XP_012488611.1| PREDICTED: uncharacterized protein LOC105801...    73   7e-11
ref|XP_012488613.1| PREDICTED: protein MATERNALLY EXPRESSED GENE...    73   7e-11
gb|KJB39490.1| hypothetical protein B456_007G016200 [Gossypium r...    73   7e-11
ref|XP_012488610.1| PREDICTED: uncharacterized protein LOC105801...    73   7e-11

>ref|XP_007039131.1| RNA-binding family protein isoform 2 [Theobroma cacao]
           gi|508776376|gb|EOY23632.1| RNA-binding family protein
           isoform 2 [Theobroma cacao]
          Length = 219

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 39/82 (47%), Positives = 50/82 (60%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV GGHEL  +YS           RD++S+GASYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYDVSGGHELSSYYSRGDDRGAVRAIRDSDSIGASYDRYL---RSTQMSSYSGSQSARPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP +MG  G+DP
Sbjct: 87  SGGMPGRSVDDPRIMGIGGVDP 108


>ref|XP_007039130.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508776375|gb|EOY23631.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 233

 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 39/82 (47%), Positives = 50/82 (60%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV GGHEL  +YS           RD++S+GASYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYDVSGGHELSSYYSRGDDRGAVRAIRDSDSIGASYDRYL---RSTQMSSYSGSQSARPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP +MG  G+DP
Sbjct: 87  SGGMPGRSVDDPRIMGIGGVDP 108


>gb|KDO59665.1| hypothetical protein CISIN_1g0266482mg [Citrus sinensis]
          Length = 179

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>gb|KDO59663.1| hypothetical protein CISIN_1g0266482mg, partial [Citrus sinensis]
           gi|641840746|gb|KDO59664.1| hypothetical protein
           CISIN_1g0266482mg, partial [Citrus sinensis]
          Length = 198

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>gb|KDO59660.1| hypothetical protein CISIN_1g0266482mg [Citrus sinensis]
          Length = 223

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>ref|XP_006491965.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X3
           [Citrus sinensis]
          Length = 214

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>ref|XP_006491964.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
           [Citrus sinensis]
          Length = 231

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>ref|XP_006441172.1| hypothetical protein CICLE_v10022008mg [Citrus clementina]
           gi|567897370|ref|XP_006441173.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|557543434|gb|ESR54412.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|557543435|gb|ESR54413.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|641840743|gb|KDO59661.1| hypothetical protein
           CISIN_1g0266482mg [Citrus sinensis]
           gi|641840744|gb|KDO59662.1| hypothetical protein
           CISIN_1g0266482mg [Citrus sinensis]
          Length = 235

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>ref|XP_006441170.1| hypothetical protein CICLE_v10022008mg [Citrus clementina]
           gi|567897366|ref|XP_006441171.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|568877915|ref|XP_006491963.1| PREDICTED: U1 small
           nuclear ribonucleoprotein A-like isoform X1 [Citrus
           sinensis] gi|557543432|gb|ESR54410.1| hypothetical
           protein CICLE_v10022008mg [Citrus clementina]
           gi|557543433|gb|ESR54411.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|641840740|gb|KDO59658.1| hypothetical protein
           CISIN_1g0266482mg [Citrus sinensis]
           gi|641840741|gb|KDO59659.1| hypothetical protein
           CISIN_1g0266482mg [Citrus sinensis]
          Length = 232

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYDV  GHEL  +Y+           RD +SLGASYDRYL   R  Q+SSY   +  RH+
Sbjct: 29  DYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYL---RSAQISSYSGGQSARHM 85

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +P  P+DDP ++G  G+DP
Sbjct: 86  SGGMPSRPVDDPRIVGIGGMDP 107


>ref|XP_007218305.1| hypothetical protein PRUPE_ppa010843mg [Prunus persica]
           gi|462414767|gb|EMJ19504.1| hypothetical protein
           PRUPE_ppa010843mg [Prunus persica]
          Length = 233

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 39/82 (47%), Positives = 47/82 (57%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYD  GGH+LP +YS           RD +S+ ASYDRYL   R  Q+ SY   +  R L
Sbjct: 30  DYDAHGGHDLPSYYSHEDDRGSLRGIRDTDSINASYDRYL---RSAQMPSYSGGQSARTL 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  LPG  +DDP MMG  G+DP
Sbjct: 87  SGGLPGRSVDDPRMMGMGGVDP 108


>ref|XP_008343802.1| PREDICTED: uncharacterized protein LOC103406591 [Malus domestica]
          Length = 233

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 37/82 (45%), Positives = 47/82 (57%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYD  GGH+LP +Y            RD +S+ ASYDRYL   R  Q+SSY   +  R++
Sbjct: 30  DYDAQGGHDLPNYYPQEDDRGSIRAIRDTDSINASYDRYL---RSAQISSYSGGQSARNM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S   PG  +DDP MMG  G+DP
Sbjct: 87  SGGPPGRAVDDPRMMGIGGVDP 108


>ref|XP_008234694.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Prunus mume]
          Length = 233

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 38/82 (46%), Positives = 47/82 (57%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYD  GGH+LP +YS           RD +S+ ASYDRYL   R  Q+ SY   +  R L
Sbjct: 30  DYDAHGGHDLPSYYSHEDDRGSLRGIRDTDSINASYDRYL---RSAQMPSYSGGQSARTL 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  LPG  +DDP MMG  G++P
Sbjct: 87  SGGLPGRSVDDPRMMGMGGVEP 108


>ref|XP_010109223.1| hypothetical protein L484_011845 [Morus notabilis]
           gi|587934485|gb|EXC21403.1| hypothetical protein
           L484_011845 [Morus notabilis]
          Length = 239

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 38/82 (46%), Positives = 48/82 (58%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DYD  G H+LP ++            RD ES+ ASYDRYL   R  QVSSYG+ +P R L
Sbjct: 30  DYDGPGSHDLPSYFPRDDDRGAMRGARDTESINASYDRYL---RSTQVSSYGSGQPGRPL 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
              +PG  +DDP ++G  GIDP
Sbjct: 87  GGGMPGRTVDDPRLVGIGGIDP 108


>gb|KHF97932.1| RNA-binding with multiple splicing [Gossypium arboreum]
          Length = 200

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRY   VR  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRY---VRSTQLSSYSGSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>ref|XP_012488614.1| PREDICTED: protein MATERNALLY EXPRESSED GENE 5-like isoform X5
           [Gossypium raimondii]
          Length = 205

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>ref|XP_012488612.1| PREDICTED: uncharacterized protein LOC105801840 isoform X3
           [Gossypium raimondii]
          Length = 210

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>ref|XP_012488611.1| PREDICTED: uncharacterized protein LOC105801840 isoform X2
           [Gossypium raimondii]
          Length = 216

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>ref|XP_012488613.1| PREDICTED: protein MATERNALLY EXPRESSED GENE 5-like isoform X4
           [Gossypium raimondii] gi|763772369|gb|KJB39492.1|
           hypothetical protein B456_007G016200 [Gossypium
           raimondii]
          Length = 209

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>gb|KJB39490.1| hypothetical protein B456_007G016200 [Gossypium raimondii]
          Length = 200

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


>ref|XP_012488610.1| PREDICTED: uncharacterized protein LOC105801840 isoform X1
           [Gossypium raimondii] gi|763772366|gb|KJB39489.1|
           hypothetical protein B456_007G016200 [Gossypium
           raimondii] gi|763772368|gb|KJB39491.1| hypothetical
           protein B456_007G016200 [Gossypium raimondii]
          Length = 233

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 38/82 (46%), Positives = 49/82 (59%)
 Frame = -1

Query: 255 DYDVLGGHELPGFYSXXXXXXXXXXXRDNESLGASYDRYLPGVRMQQVSSYGAVEPPRHL 76
           DY V GGHEL G+YS           RD++S+G SYDRYL   R  Q+SSY   +  R +
Sbjct: 30  DYVVSGGHELSGYYSRDDDKRTMRATRDSDSIGESYDRYL---RSTQLSSYSRSQSGRPM 86

Query: 75  SPRLPGHPIDDPSMMGFRGIDP 10
           S  +PG  +DDP M+G  G+DP
Sbjct: 87  SGGMPGRAVDDPRMVGIGGLDP 108


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