BLASTX nr result
ID: Cinnamomum25_contig00041863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00041863
(282 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010314945.1| PREDICTED: ribosomal protein S4, mitochondri... 97 3e-18
gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium r... 90 5e-16
ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|6... 79 1e-14
gb|AEN56127.1| ribosomal protein S4 [Cucumis melo subsp. melo] 84 4e-14
ref|YP_009041168.1| ribosomal protein subunit S4 (mitochondrion)... 79 1e-12
ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259... 78 2e-12
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|... 77 6e-12
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 77 6e-12
emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus dome... 73 8e-11
ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum] 72 1e-10
gb|AJM70227.1| ribosomal protein S4 (mitochondrion) [Nicotiana t... 70 5e-10
ref|YP_009121977.1| ribosomal protein S4 (mitochondrion) [Hyoscy... 70 5e-10
ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion)... 70 5e-10
ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|1705... 67 6e-09
gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea] 62 6e-09
gb|AHJ81020.1| ribosomal protein S4 (mitochondrion) [Panax ginseng] 60 1e-08
ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr... 65 1e-08
ref|XP_011077036.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal pr... 61 2e-08
gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Am... 65 2e-08
gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t... 65 2e-08
>ref|XP_010314945.1| PREDICTED: ribosomal protein S4, mitochondrial [Solanum
lycopersicum]
Length = 450
Score = 97.4 bits (241), Expect = 3e-18
Identities = 52/89 (58%), Positives = 57/89 (64%)
Frame = -2
Query: 269 PPASSRGGSIPVIRDVAKKTDLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXX 90
PPA+ +P+IRDVAKKTD TRYALPALRFKTCRLL GNVWNRELT
Sbjct: 80 PPAAEAETELPLIRDVAKKTDSTRYALPALRFKTCRLLSGNVWNRELTIIQRRILGRLRN 139
Query: 89 XXXXXXXXXXXXQNLNSYIKLQTTRKLSL 3
+NLNSYI+ QTTRKLSL
Sbjct: 140 KKRSIKRKIYSRENLNSYIQSQTTRKLSL 168
>gb|KJB09742.1| hypothetical protein B456_001G161800 [Gossypium raimondii]
Length = 329
Score = 90.1 bits (222), Expect = 5e-16
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 278 ILHPPASSRGGSIPVIRDVAKKTDLTRYALPALRFKTCRLLLGNVWNRELT 126
ILHPPASSRGGSIPVIRDVAKKT+ RY +PALRFKTCRLL GNV NRELT
Sbjct: 59 ILHPPASSRGGSIPVIRDVAKKTEKPRYEMPALRFKTCRLLSGNVRNRELT 109
>ref|YP_009045729.1| orf174 (mitochondrion) [Batis maritima] gi|655168503|gb|AIC83332.1|
orf174 (mitochondrion) [Batis maritima]
Length = 174
Score = 78.6 bits (192), Expect(2) = 1e-14
Identities = 39/45 (86%), Positives = 41/45 (91%)
Frame = +1
Query: 118 CIIVSSLFQTFPNSRRQVLNLNAGKAYLVKSVFFATSRITGIEPP 252
CIIVSSLF+TFP SRRQVLN NAG YLV+SVFFATSRITGIEPP
Sbjct: 4 CIIVSSLFRTFPESRRQVLNRNAGIFYLVESVFFATSRITGIEPP 48
Score = 27.3 bits (59), Expect(2) = 1e-14
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 248 PLCCWRADGE 277
P CCWRADGE
Sbjct: 47 PPCCWRADGE 56
>gb|AEN56127.1| ribosomal protein S4 [Cucumis melo subsp. melo]
Length = 379
Score = 84.0 bits (206), Expect = 4e-14
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -2
Query: 248 GSIPVIRDVAKKTDLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXX 69
GSIPVIRDVAKK D RYALPALRF+TCRLLLGNV RELT
Sbjct: 13 GSIPVIRDVAKKRDERRYALPALRFQTCRLLLGNVRKRELTIIQRRILRKLRNKKRSIKR 72
Query: 68 XXXXXQNLNSYIKLQTTRKLSL 3
+NLNSYI+ QTTRKL L
Sbjct: 73 KIYPRENLNSYIQSQTTRKLPL 94
>ref|YP_009041168.1| ribosomal protein subunit S4 (mitochondrion) [Rhazya stricta]
gi|645929292|gb|AIB08815.1| ribosomal protein subunit S4
(mitochondrion) [Rhazya stricta]
Length = 393
Score = 79.0 bits (193), Expect = 1e-12
Identities = 43/75 (57%), Positives = 46/75 (61%)
Frame = -2
Query: 227 DVAKKTDLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQN 48
DVAKKTD TRY +PALRFKTCRLL GNVW RELT +N
Sbjct: 34 DVAKKTDSTRYNVPALRFKTCRLLSGNVWKRELTIIQRRILQRLRNKKRSIKRKIYSREN 93
Query: 47 LNSYIKLQTTRKLSL 3
LNSYI+ QTTRKLSL
Sbjct: 94 LNSYIQSQTTRKLSL 108
>ref|YP_003587372.1| ribosomal protein S4 [Cucurbita pepo] gi|259156835|gb|ACV96696.1|
ribosomal protein S4 [Cucurbita pepo]
Length = 356
Score = 78.2 bits (191), Expect = 2e-12
Identities = 42/69 (60%), Positives = 44/69 (63%)
Frame = -2
Query: 209 DLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIK 30
D TRYALPALRFKTCRLLLGNVWNRELT +NLNSYI+
Sbjct: 2 DSTRYALPALRFKTCRLLLGNVWNRELTIIQRRILRKLRNKRRSIKRKIYSRENLNSYIQ 61
Query: 29 LQTTRKLSL 3
LQTTRKLSL
Sbjct: 62 LQTTRKLSL 70
>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
gi|259156791|gb|ACV96653.1| ribosomal protein S4
[Citrullus lanatus]
Length = 355
Score = 76.6 bits (187), Expect = 6e-12
Identities = 41/69 (59%), Positives = 44/69 (63%)
Frame = -2
Query: 209 DLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIK 30
D TRYALPALRF+TCRLLLGNVWNRELT +NLNSYI+
Sbjct: 2 DSTRYALPALRFQTCRLLLGNVWNRELTIIQRRILRKLRNKKRSIKRKIYSRENLNSYIQ 61
Query: 29 LQTTRKLSL 3
LQTTRKLSL
Sbjct: 62 LQTTRKLSL 70
>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 76.6 bits (187), Expect = 6e-12
Identities = 41/67 (61%), Positives = 43/67 (64%)
Frame = -2
Query: 203 TRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQ 24
TRYALPALRFKTCRLLLGNVWNRELT +NLNSYI+LQ
Sbjct: 1 TRYALPALRFKTCRLLLGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQLQ 60
Query: 23 TTRKLSL 3
TTRKLSL
Sbjct: 61 TTRKLSL 67
>emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus domestica]
Length = 359
Score = 72.8 bits (177), Expect = 8e-11
Identities = 41/74 (55%), Positives = 45/74 (60%)
Frame = -2
Query: 224 VAKKTDLTRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNL 45
+AKKTD TRYA+PALRFKTCRLL GNV NRELT +NL
Sbjct: 1 MAKKTDSTRYAVPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNL 60
Query: 44 NSYIKLQTTRKLSL 3
NSYI+ QTTRKL L
Sbjct: 61 NSYIQSQTTRKLPL 74
>ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum]
Length = 349
Score = 72.0 bits (175), Expect = 1e-10
Identities = 39/67 (58%), Positives = 41/67 (61%)
Frame = -2
Query: 203 TRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQ 24
TRYALPALRFKTCRLL GNVWNRELT +NLNSYI+ Q
Sbjct: 1 TRYALPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQ 60
Query: 23 TTRKLSL 3
TTRKLSL
Sbjct: 61 TTRKLSL 67
>gb|AJM70227.1| ribosomal protein S4 (mitochondrion) [Nicotiana tabacum/Hyoscyamus
niger cybrid]
Length = 349
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/66 (57%), Positives = 40/66 (60%)
Frame = -2
Query: 200 RYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQT 21
RYALPALRFKTCRLL GNVWNRELT +NLNSYI+ QT
Sbjct: 2 RYALPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQT 61
Query: 20 TRKLSL 3
TRKLSL
Sbjct: 62 TRKLSL 67
>ref|YP_009121977.1| ribosomal protein S4 (mitochondrion) [Hyoscyamus niger]
gi|756142184|gb|AJK91395.1| ribosomal protein S4
(mitochondrion) [Hyoscyamus niger]
Length = 349
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/66 (57%), Positives = 40/66 (60%)
Frame = -2
Query: 200 RYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQT 21
RYALPALRFKTCRLL GNVWNRELT +NLNSYI+ QT
Sbjct: 2 RYALPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRKIYSRENLNSYIQSQT 61
Query: 20 TRKLSL 3
TRKLSL
Sbjct: 62 TRKLSL 67
>ref|YP_006460178.1| ribosomal protein subunit S4 (mitochondrion) (mitochondrion)
[Erythranthe guttata] gi|340007672|gb|AEK26536.1|
ribosomal protein subunit S4 (mitochondrion)
(mitochondrion) [Erythranthe guttata]
Length = 353
Score = 70.1 bits (170), Expect = 5e-10
Identities = 38/66 (57%), Positives = 40/66 (60%)
Frame = -2
Query: 200 RYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQT 21
RYALPALRFKTCRLL GNVWNRELT +NLNSYI+ QT
Sbjct: 2 RYALPALRFKTCRLLSGNVWNRELTIIQRRILQRLRNKKRSIKRKIYSRENLNSYIQSQT 61
Query: 20 TRKLSL 3
TRKLSL
Sbjct: 62 TRKLSL 67
>ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|170522371|gb|ACB20481.1|
ribosomal protein S4, partial (mitochondrion) [Carica
papaya]
Length = 352
Score = 66.6 bits (161), Expect = 6e-09
Identities = 38/67 (56%), Positives = 40/67 (59%)
Frame = -2
Query: 203 TRYALPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQ 24
TRYALPALRFKTCRLL GNV NRELT +NLNSYI+ Q
Sbjct: 1 TRYALPALRFKTCRLLSGNVRNRELTIIQRRILRRLRNKKRSIKRKIYPRKNLNSYIQSQ 60
Query: 23 TTRKLSL 3
TTRKLSL
Sbjct: 61 TTRKLSL 67
>gb|EPS74675.1| hypothetical protein M569_00050 [Genlisea aurea]
Length = 354
Score = 61.6 bits (148), Expect(2) = 6e-09
Identities = 33/63 (52%), Positives = 37/63 (58%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
+PALRF+TCRLL GNVWNRELT +NLNSYI+ QTTRK
Sbjct: 11 MPALRFQTCRLLSGNVWNRELTIIQRRILKRLRKKKRSMLRKISSRENLNSYIQSQTTRK 70
Query: 11 LSL 3
LSL
Sbjct: 71 LSL 73
Score = 25.0 bits (53), Expect(2) = 6e-09
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 226 MWRKRLI*RDMPCL 185
MWRK+ I RDMP L
Sbjct: 1 MWRKKRIQRDMPAL 14
>gb|AHJ81020.1| ribosomal protein S4 (mitochondrion) [Panax ginseng]
Length = 355
Score = 60.5 bits (145), Expect(2) = 1e-08
Identities = 33/63 (52%), Positives = 35/63 (55%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
LPALRFKTCRLL GNVWNRELT +NLNSYI+ QTTRK
Sbjct: 13 LPALRFKTCRLLSGNVWNRELTIIQRRILRRLRNKKRSIKRNLYSRENLNSYIQSQTTRK 72
Query: 11 LSL 3
L
Sbjct: 73 FPL 75
Score = 25.0 bits (53), Expect(2) = 1e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 226 MWRKRLI*RDMP 191
MWRKRLI R+MP
Sbjct: 1 MWRKRLIQRNMP 12
>ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica]
gi|340549497|gb|AEK53318.1| ribosomal protein S4
(mitochondrion) [Boea hygrometrica]
Length = 329
Score = 65.5 bits (158), Expect = 1e-08
Identities = 35/63 (55%), Positives = 38/63 (60%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
+PALRFKTCRLLLGNVWNRELT +NLNSYI+ QTTRK
Sbjct: 1 MPALRFKTCRLLLGNVWNRELTIIQRRILKRLRNKKRSIKRKIYSRKNLNSYIQSQTTRK 60
Query: 11 LSL 3
LSL
Sbjct: 61 LSL 63
>ref|XP_011077036.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal protein S4, mitochondrial
[Sesamum indicum]
Length = 356
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 33/63 (52%), Positives = 36/63 (57%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
LPALRFKTC LL GNVWN+ELT +NLNSYI+ QTTRK
Sbjct: 13 LPALRFKTCHLLSGNVWNKELTIIQRRILQRLRNKKRSIKRKIYSRENLNSYIQSQTTRK 72
Query: 11 LSL 3
LSL
Sbjct: 73 LSL 75
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3
Query: 226 MWRKRLI*RDM 194
MWRKRLI RDM
Sbjct: 1 MWRKRLIQRDM 11
>gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Amborella
trichopoda]
Length = 324
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/63 (55%), Positives = 38/63 (60%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
+PALRF+TCR LLGNVWNRELT +NLNSYIKLQTTRK
Sbjct: 1 MPALRFQTCRPLLGNVWNRELTIIQRRILRRLRNKKRSIKRKISSRKNLNSYIKLQTTRK 60
Query: 11 LSL 3
LSL
Sbjct: 61 LSL 63
>gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda]
Length = 354
Score = 65.1 bits (157), Expect = 2e-08
Identities = 35/63 (55%), Positives = 38/63 (60%)
Frame = -2
Query: 191 LPALRFKTCRLLLGNVWNRELTXXXXXXXXXXXXXXXXXXXXXXXXQNLNSYIKLQTTRK 12
+PALRF+TCR LLGNVWNRELT +NLNSYIKLQTTRK
Sbjct: 1 MPALRFQTCRPLLGNVWNRELTIIQRRILRRLRNKKRSIKRKISSRKNLNSYIKLQTTRK 60
Query: 11 LSL 3
LSL
Sbjct: 61 LSL 63