BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00041782
         (337 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGI44298.1| RNA dependent RNA polymerase [Blueberry necrotic ...    58   2e-06
ref|YP_004901701.1| polymerase [Blueberry necrotic ring blotch v...    57   5e-06

>gb|AGI44298.1| RNA dependent RNA polymerase [Blueberry necrotic ring blotch virus]
          Length = 1145

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/85 (32%), Positives = 47/85 (55%)
 Frame = -1

Query: 322  LALEFNFSAKFFSSDYRYMCSKYWIPVDGKWYWVADPIRRLESVAAAIQVDEEGITAKWV 143
            L+  +NF  K F   Y Y CSK+ + V+G+W    DP++R   +  A   + E +    V
Sbjct: 1016 LSTRYNFEVKLFDFQYHYFCSKFVLNVNGRWVVTPDPLKRAVKLGRADLRNFEHVEEYRV 1075

Query: 142  SLRDDLRHYDNPMIVDQLVEAVAQR 68
            S  D+++ Y+N  +V++L  AV +R
Sbjct: 1076 SFIDNVKTYNNSAVVEKLSLAVMER 1100


>ref|YP_004901701.1| polymerase [Blueberry necrotic ring blotch virus]
            gi|351630291|gb|AEQ55300.1| polymerase [Blueberry
            necrotic ring blotch virus]
          Length = 1144

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 27/85 (31%), Positives = 47/85 (55%)
 Frame = -1

Query: 322  LALEFNFSAKFFSSDYRYMCSKYWIPVDGKWYWVADPIRRLESVAAAIQVDEEGITAKWV 143
            L+  +NF  K F   Y Y CSK+ + V+G+W    DP++R   +  A   + + +    V
Sbjct: 1015 LSTRYNFEVKLFDFQYHYFCSKFVLNVNGRWVVTPDPLKRAVKLGRADLRNFDHVEEYRV 1074

Query: 142  SLRDDLRHYDNPMIVDQLVEAVAQR 68
            S  D+++ Y+N  +V++L  AV +R
Sbjct: 1075 SFIDNVKTYNNSAVVEKLSLAVMER 1099