BLASTX nr result
ID: Cinnamomum25_contig00041473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00041473
(256 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_569129.1| 40kDa protein [Garlic virus A] gi|543592|pir||J... 176 7e-42
gb|AGG13291.1| 40 kDa Protein [Garlic virus A] 174 3e-41
gb|AGC09144.1| 40 kDa protein [Garlic virus A] 164 2e-38
gb|AEV51802.1| 40 kDa protein [Garlic virus A] 158 1e-36
gb|AGC09138.1| 40 kDa protein [Garlic virus A] gi|562745034|gb|A... 149 7e-34
gb|AGG13279.1| 40 kDa protein [Garlic virus A] 141 1e-31
ref|NP_659013.1| serine-rich protein [Garlic virus E] gi|1862109... 129 6e-28
gb|AEV51819.1| 40 kDa protein [Garlic virus D] 123 4e-26
ref|YP_008855209.1| 40 kDa protein [Garlic virus D] gi|2826162|d... 121 2e-25
gb|AHA90836.1| 40 kDa protein [Garlic virus D] 119 8e-25
gb|AAA88539.1| non-structural protein [Shallot virus X] 116 5e-24
gb|AFK50338.1| hypothetical protein, partial [Shallot virus X] 115 9e-24
gb|AGC67032.1| p42 [Shallot virus X] 115 1e-23
ref|NP_620651.1| hypothetical protein [Shallot virus X] gi|54982... 112 7e-23
gb|AGG13303.1| 40 kDa Protein [Garlic virus C] 89 1e-15
dbj|BAA08421.1| ORF III [Garlic mite-borne mosaic virus] 88 3e-15
gb|AGG13261.1| 32 kDa protein [Garlic virus X] 86 7e-15
gb|AGG13297.1| 40 kDa Protein [Garlic virus C] 86 1e-14
gb|AFV61770.1| 40 kDa protein [Garlic virus X] 83 8e-14
emb|CAC83702.1| serine-rich protein [Garlic virus X] 82 1e-13
>ref|NP_569129.1| 40kDa protein [Garlic virus A] gi|543592|pir||JQ2174 hypothetical
39.2K protein (clone GV-A) - garlic virus B [Garlic
virus B] gi|221429|dbj|BAA61809.1| 40kDa protein [Garlic
virus A]
Length = 357
Score = 176 bits (445), Expect = 7e-42
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTP DQSTTVSYKIF
Sbjct: 253 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPSDQSTTVSYKIF 312
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLLTSDD+ETNHRLQHYPSDCL
Sbjct: 313 DDGYLLTSDDIETNHRLQHYPSDCL 337
>gb|AGG13291.1| 40 kDa Protein [Garlic virus A]
Length = 364
Score = 174 bits (440), Expect = 3e-41
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTP DQSTTVSYKIF
Sbjct: 260 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPSDQSTTVSYKIF 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLLTS+D+ETNHRLQHYPSDCL
Sbjct: 320 DDGYLLTSNDIETNHRLQHYPSDCL 344
>gb|AGC09144.1| 40 kDa protein [Garlic virus A]
Length = 364
Score = 164 bits (416), Expect = 2e-38
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQA HP+ PCRTYGTILLDGVHSKIPMDIIGRPASTALRLEL VTPGDQSTT+SYKIF
Sbjct: 260 PVYQAVHPTTPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELCVTPGDQSTTLSYKIF 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL SDD+ET+HRLQHYPSDCL
Sbjct: 320 DDGYLLASDDVETSHRLQHYPSDCL 344
>gb|AEV51802.1| 40 kDa protein [Garlic virus A]
Length = 364
Score = 158 bits (400), Expect = 1e-36
Identities = 74/85 (87%), Positives = 79/85 (92%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQA HPS PCRTYGTILLDGV+SKIPMDIIGRPASTALRLEL VTP DQSTTV YKIF
Sbjct: 260 PVYQADHPSIPCRTYGTILLDGVYSKIPMDIIGRPASTALRLELCVTPSDQSTTVGYKIF 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLLTSDD+ET+H+LQHYP DCL
Sbjct: 320 DDGYLLTSDDVETSHKLQHYPGDCL 344
>gb|AGC09138.1| 40 kDa protein [Garlic virus A] gi|562745034|gb|AHB33490.1| 40 kDa
protein [Garlic virus A]
Length = 366
Score = 149 bits (376), Expect = 7e-34
Identities = 68/85 (80%), Positives = 78/85 (91%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQAAHP++PCRTYGTIL+DG +S+IPMDI GRPASTALR+EL VT +QSTTVSYKIF
Sbjct: 262 PVYQAAHPTRPCRTYGTILIDGAYSRIPMDITGRPASTALRVELCVTLTEQSTTVSYKIF 321
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLLTSDD+ET H+LQHYP DCL
Sbjct: 322 DDGYLLTSDDIETAHKLQHYPGDCL 346
>gb|AGG13279.1| 40 kDa protein [Garlic virus A]
Length = 364
Score = 141 bits (356), Expect = 1e-31
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P Y A HP++PCRTYGTIL D S+IPMDI+GRPASTALRLEL VTP +QSTTV+YK+F
Sbjct: 260 PTYLATHPTRPCRTYGTILFDNTSSRIPMDIVGRPASTALRLELSVTPSNQSTTVTYKVF 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL SD+ ET+H+LQH+PSDCL
Sbjct: 320 DDGYLLISDNAETSHKLQHFPSDCL 344
>ref|NP_659013.1| serine-rich protein [Garlic virus E] gi|18621094|emb|CAC83708.1|
serine-rich protein [Garlic virus E]
Length = 364
Score = 129 bits (325), Expect = 6e-28
Identities = 57/85 (67%), Positives = 71/85 (83%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQA HP+ CRTYGTI+ DG S+IPMDI+GRPASTALRL++ V Q+TTVSYK+F
Sbjct: 260 PVYQAVHPTTSCRTYGTIIFDGTSSRIPMDILGRPASTALRLDMTVATSSQNTTVSYKMF 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL S+++ET H+LQH P+DCL
Sbjct: 320 DDGYLLLSENVETAHKLQHCPNDCL 344
>gb|AEV51819.1| 40 kDa protein [Garlic virus D]
Length = 364
Score = 123 bits (309), Expect = 4e-26
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P YQA HP++PCR YGT+L D +IPMDIIGRP STAL++EL +T DQ+T V YKI+
Sbjct: 260 PAYQAQHPTRPCRAYGTVLFDDKTLRIPMDIIGRPVSTALKIELHLTANDQTTVVLYKIY 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL SDD+ET H+LQH SDCL
Sbjct: 320 DDGYLLLSDDIETAHKLQHRLSDCL 344
>ref|YP_008855209.1| 40 kDa protein [Garlic virus D] gi|2826162|dbj|BAA61824.1| 40kDa
protein [Garlic virus D] gi|558868948|gb|AHA93788.1| 40
kDa protein [Garlic virus D]
Length = 364
Score = 121 bits (303), Expect = 2e-25
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P YQA HP++PCR YGT+L + +IPMDI GRP STAL+LEL +T DQ+T VSY+I+
Sbjct: 260 PAYQAQHPTRPCRAYGTVLFEDKILRIPMDITGRPVSTALKLELHLTTNDQTTMVSYRIY 319
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL SDD+ET H+LQH SDCL
Sbjct: 320 DDGYLLLSDDVETAHKLQHRLSDCL 344
>gb|AHA90836.1| 40 kDa protein [Garlic virus D]
Length = 363
Score = 119 bits (298), Expect = 8e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P YQA HP++PCR YGT+L D +IPMDI GRP STAL+LEL +T +Q+T VSYKI+
Sbjct: 259 PTYQAQHPTRPCRAYGTVLFDNKTVRIPMDITGRPVSTALKLELHLTTNNQTTAVSYKIY 318
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGYLL SDD+ET H+LQH SD L
Sbjct: 319 DDGYLLLSDDVETAHKLQHRLSDSL 343
>gb|AAA88539.1| non-structural protein [Shallot virus X]
Length = 380
Score = 116 bits (291), Expect = 5e-24
Identities = 53/85 (62%), Positives = 66/85 (77%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQA HPS CRTYG IL +GV S+IPMDI GRPAST+L+L + V +QST V++ +
Sbjct: 276 PLYQAVHPSLFCRTYGNILYNGVDSRIPMDITGRPASTSLKLTITVDCSEQSTKVNFTLL 335
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGY+L SD +ET H+LQH PSDCL
Sbjct: 336 DDGYILLSDSIETKHKLQHIPSDCL 360
>gb|AFK50338.1| hypothetical protein, partial [Shallot virus X]
Length = 131
Score = 115 bits (289), Expect = 9e-24
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P YQAAHP+ CRTYG IL DGV+S+IPMD+ GRPAST+ RL + V G+++T V++ +
Sbjct: 27 PPYQAAHPNLFCRTYGNILYDGVNSRIPMDVTGRPASTSXRLTVNVECGERNTKVNFTLL 86
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGY+L SD +ET HRLQH P DCL
Sbjct: 87 DDGYILLSDSIETKHRLQHIPGDCL 111
>gb|AGC67032.1| p42 [Shallot virus X]
Length = 380
Score = 115 bits (288), Expect = 1e-23
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P+YQA HPS CRTYG IL +GV S+IPMDI GRPAST+L+L + V +Q+T V++ +
Sbjct: 276 PLYQAVHPSLFCRTYGNILYNGVDSRIPMDITGRPASTSLKLTITVECSEQNTKVNFTLL 335
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGY+L SD +ET H+LQH PSDCL
Sbjct: 336 DDGYILLSDSIETKHKLQHIPSDCL 360
>ref|NP_620651.1| hypothetical protein [Shallot virus X]
gi|549822|sp|Q04583.1|ORF4_SHVX RecName:
Full=Uncharacterized ORF4 protein; AltName: Full=42 kDa
protein gi|295082|gb|AAA47790.1| unknown [Shallot virus
X]
Length = 380
Score = 112 bits (281), Expect = 7e-23
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P YQA HPS CRTYG IL +G+ S+IPMD+ GRPAST+L+L + V +Q+T V++ +
Sbjct: 276 PPYQAVHPSLFCRTYGNILYNGIDSRIPMDVTGRPASTSLKLTITVECSEQNTRVNFTLL 335
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDGY+L SD +ET H+LQH PSDCL
Sbjct: 336 DDGYILLSDSIETKHKLQHIPSDCL 360
>gb|AGG13303.1| 40 kDa Protein [Garlic virus C]
Length = 368
Score = 88.6 bits (218), Expect = 1e-15
Identities = 41/83 (49%), Positives = 59/83 (71%)
Frame = -1
Query: 250 YQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIFDD 71
YQA HP+ CRTYGT++ +G +PMDI+G+PASTAL+L++ + P T V+YK+ D+
Sbjct: 266 YQARHPTTRCRTYGTLIYNGSSLHMPMDILGKPASTALQLQVDIKPSPGGTNVTYKLADN 325
Query: 70 GYLLTSDDMETNHRLQHYPSDCL 2
G LL+SD++ T H+L SD L
Sbjct: 326 GALLSSDEIFTPHKLNKPLSDAL 348
>dbj|BAA08421.1| ORF III [Garlic mite-borne mosaic virus]
Length = 368
Score = 87.8 bits (216), Expect = 3e-15
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = -1
Query: 250 YQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIFDD 71
YQA HP+ CRTYGT++ +G +PMDI+G+PASTAL+L++ + P T V+YK+ D+
Sbjct: 266 YQARHPTTRCRTYGTLIYNGSSLHMPMDILGKPASTALQLQVDIKPSPGGTNVTYKLADN 325
Query: 70 GYLLTSDDMETNHRLQHYPSDCL 2
G LL SD++ T H+L SD L
Sbjct: 326 GALLLSDEIFTPHKLNKPLSDAL 348
>gb|AGG13261.1| 32 kDa protein [Garlic virus X]
Length = 288
Score = 86.3 bits (212), Expect = 7e-15
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P + HP+ CR YG++ G +IPMD+ GR ASTALRL +R TP ++TTV YK+F
Sbjct: 184 PAFNPEHPTSRCRAYGSVEFGGAVLQIPMDVRGRRASTALRLSIRYTPKREATTVKYKLF 243
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDG LL ++++ T H+ SD L
Sbjct: 244 DDGALLFTEELSTQHKFMQPFSDSL 268
>gb|AGG13297.1| 40 kDa Protein [Garlic virus C]
Length = 366
Score = 85.5 bits (210), Expect = 1e-14
Identities = 41/83 (49%), Positives = 57/83 (68%)
Frame = -1
Query: 250 YQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIFDD 71
YQA HP CRTYGTI+ +G +PMDI+G+PASTAL+L + V P Q T+V+Y++ D+
Sbjct: 264 YQAQHPKTRCRTYGTIIYNGSSLHMPMDILGKPASTALQLHVAVKPSAQGTSVTYRLADN 323
Query: 70 GYLLTSDDMETNHRLQHYPSDCL 2
G LL SD++ ++L SD L
Sbjct: 324 GALLLSDEIVVPNKLTEPLSDAL 346
>gb|AFV61770.1| 40 kDa protein [Garlic virus X]
Length = 356
Score = 82.8 bits (203), Expect = 8e-14
Identities = 39/85 (45%), Positives = 53/85 (62%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P + HP+ CR YG++ G +IPMD+ GR ASTALRL + TP + TTV YK+F
Sbjct: 252 PTFNPEHPTARCRAYGSVEFGGAVLQIPMDVRGRRASTALRLSVMYTPKREETTVKYKLF 311
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDG LL ++++ T H+ SD L
Sbjct: 312 DDGALLFTEELSTQHKFMQPFSDSL 336
>emb|CAC83702.1| serine-rich protein [Garlic virus X]
Length = 356
Score = 82.4 bits (202), Expect = 1e-13
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = -1
Query: 256 PIYQAAHPSKPCRTYGTILLDGVHSKIPMDIIGRPASTALRLELRVTPGDQSTTVSYKIF 77
P + HP+ CR YG++ G +IPMD+ GR ASTALRL ++ TP ++TTV YK+F
Sbjct: 252 PTFNPEHPTARCRAYGSVEFGGAVLQIPMDVRGRRASTALRLSVKYTPKREATTVKYKLF 311
Query: 76 DDGYLLTSDDMETNHRLQHYPSDCL 2
DDG LL ++++ T H+ +D L
Sbjct: 312 DDGALLFTEELSTQHQFTQPFNDSL 336