BLASTX nr result
ID: Cinnamomum25_contig00041278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00041278
(222 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda] 68 3e-09
ref|XP_010319967.1| PREDICTED: uncharacterized protein LOC104647... 65 2e-08
gb|ABO26299.1| polyprotein [Nicotiana tabacum] 63 7e-08
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 62 2e-07
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc... 59 2e-06
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 59 2e-06
ref|XP_004245423.1| PREDICTED: lipoyl synthase 1, mitochondrial-... 58 2e-06
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula] 58 2e-06
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 58 2e-06
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 58 2e-06
gb|KEH22680.1| F-box/RNI/FBD-like domain protein [Medicago trunc... 58 3e-06
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 57 5e-06
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 57 5e-06
gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irr... 57 6e-06
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 57 6e-06
ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455... 56 8e-06
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc... 56 8e-06
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 56 8e-06
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 56 8e-06
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 56 8e-06
>ref|XP_006827235.2| PREDICTED: DNA ligase 1 [Amborella trichopoda]
Length = 480
Score = 67.8 bits (164), Expect = 3e-09
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVTQ 171
RTK+I L+YH I+E V E II+LKKI+ ENP + TK V EKFKLCLDL+++ Q
Sbjct: 63 RTKYIDLRYHKIKELVLEGIIYLKKIHTNENPANILTKLVTTEKFKLCLDLLNICQ 118
>ref|XP_010319967.1| PREDICTED: uncharacterized protein LOC104647090 [Solanum
lycopersicum]
Length = 251
Score = 65.1 bits (157), Expect = 2e-08
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLI 159
RTKHI ++YH+IRE V ++ +KKI+ ENP M TK +P++KFKLC +L+
Sbjct: 195 RTKHIDIRYHWIREKVESNLFHVKKIHTSENPVDMLTKKIPKDKFKLCKELV 246
>gb|ABO26299.1| polyprotein [Nicotiana tabacum]
Length = 57
Score = 63.2 bits (152), Expect = 7e-08
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVTQH 174
RTKHI ++YHF+RE + E + +KKI+ ENP M TK V KF+ CLDLI++ +H
Sbjct: 1 RTKHIDVRYHFVREIIEEGGVTVKKIHTTENPADMLTKVVIAVKFQHCLDLINIVEH 57
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVTQ 171
RTKHI ++YHF+R +E I +KK+ +NP MFTK VP KFK CLDL++VTQ
Sbjct: 1367 RTKHIDVRYHFLR---SEKRIVVKKVGTADNPADMFTKPVPVRKFKHCLDLLNVTQ 1419
>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1131
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHV 165
RTKHI +KYH++R+ VA+ + + KI +NP M TKHVP KF+LC L+ +
Sbjct: 1076 RTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPANMMTKHVPVAKFELCSSLVGI 1129
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 58.5 bits (140), Expect = 2e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHV 165
RTKH+ ++YHFIRE V+ + L+KI +NP M TK +P K++ CLDL+ V
Sbjct: 747 RTKHVDVRYHFIRETVSSGAMKLEKISTTDNPANMATKVLPIRKYRYCLDLVQV 800
>ref|XP_004245423.1| PREDICTED: lipoyl synthase 1, mitochondrial-like [Solanum
lycopersicum]
Length = 313
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLI 159
RTK I ++YH+IRE V LKKI+ ENP M TK +P++KF+LC +L+
Sbjct: 100 RTKQIDVRYHWIREEVESESFDLKKIHTSENPADMLTKMIPKDKFELCKELV 151
>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
Length = 803
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVTQH*RV 183
RTKHI ++ HF+R+ + I ++K+ + ENP +FTK +PR +FK CLDLI +
Sbjct: 103 RTKHIDIRLHFVRDMIESKEIVVEKVASEENPADVFTKSLPRSRFKHCLDLIKFVEEFAC 162
Query: 184 KT 189
+T
Sbjct: 163 RT 164
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 58.2 bits (139), Expect = 2e-06
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI L+YHFIR +AE + + KI +NP M TK VP KF+LC L+ VT
Sbjct: 1186 RTKHIDLRYHFIRGVIAEGDVKVCKISTHDNPVDMMTKPVPATKFELCSSLVGVT 1240
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/54 (48%), Positives = 37/54 (68%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHV 165
RTKHI +KYH++R+ VA+ + + KI +NP M TKHVP KF+LC L+ +
Sbjct: 1120 RTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLVGI 1173
>gb|KEH22680.1| F-box/RNI/FBD-like domain protein [Medicago truncatula]
Length = 293
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/52 (48%), Positives = 37/52 (71%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLI 159
RTKHI ++ HF+R+ + I ++K+ + ENP +FTK +PR +FK CLDLI
Sbjct: 237 RTKHIDIRLHFVRDMIESKEIVVEKVASEENPADVFTKSLPRSRFKHCLDLI 288
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 57.0 bits (136), Expect = 5e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI ++YHFIR +AE + + KI +NP M TK VP KF+LC L+ VT
Sbjct: 1126 RTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGVT 1180
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 57.0 bits (136), Expect = 5e-06
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI ++YHFIR +AE + + KI +NP M TK VP KF+LC L+ VT
Sbjct: 1156 RTKHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMTKPVPTTKFELCSSLVGVT 1210
>gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irregularis DAOM
197198w]
Length = 103
Score = 56.6 bits (135), Expect = 6e-06
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI ++YHFIR+ +++ I ++KI +NP M TK VP KF+LC L+ +T
Sbjct: 48 RTKHIDVRYHFIRDVISKGDIQVQKISTHDNPADMMTKPVPATKFELCSSLVGMT 102
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 56.6 bits (135), Expect = 6e-06
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHV 165
RTKHI ++YHF+R +E I +KK+ +NP MFTK VP+ KF+ CLDL+++
Sbjct: 1254 RTKHIDVRYHFLR---SEKRIKVKKVGTADNPADMFTKPVPQSKFQHCLDLLNI 1304
>ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455257 [Malus domestica]
Length = 253
Score = 56.2 bits (134), Expect = 8e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLI 159
RTKHI +++HF+RE + + I L+KI +NP M TK V KFK CLDLI
Sbjct: 196 RTKHIDVRFHFVREIIDDGDILLQKIETADNPADMLTKPVSLHKFKHCLDLI 247
>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1138
Score = 56.2 bits (134), Expect = 8e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI ++YHFIR + E + + KI +NP M TK VP KF+LC L+ VT
Sbjct: 1083 RTKHIDVRYHFIRSVITEGDVKVCKISTHDNPADMMTKPVPATKFELCSSLVGVT 1137
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 56.2 bits (134), Expect = 8e-06
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHVT 168
RTKHI L+YHFIR + E + + KI +NP M TK VP KF+LC L+ VT
Sbjct: 1115 RTKHIDLRYHFIRGVITEGEVKVCKISTHDNPADMMTKLVPATKFELCSSLVAVT 1169
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease [Nicotiana tabacum]
gi|20045|emb|CAA32025.1| unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 56.2 bits (134), Expect = 8e-06
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLI 159
RTKHI ++YH+IRE V + + + KI ENP M TK VPR KF+LC +L+
Sbjct: 1272 RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELV 1323
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 56.2 bits (134), Expect = 8e-06
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +1
Query: 4 RTKHIVLKYHFIRENVAESIIFLKKIYAFENPTYMFTKHVPREKFKLCLDLIHV 165
RTKHI ++YHFIRE ++ + L+KI +NP M TK +P KFK LDL+ V
Sbjct: 716 RTKHIDVRYHFIRETISSGAMKLEKISXVDNPADMATKVLPVTKFKYSLDLVQV 769