BLASTX nr result

ID: Cinnamomum25_contig00040542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00040542
         (264 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EFL01765.1| conserved hypothetical protein, partial [Streptom...    70   7e-10
gb|EFK98589.1| conserved hypothetical protein, partial [Streptom...    60   6e-07
gb|EGD40054.1| hypothetical protein NBCG_05699 [Nocardioidaceae ...    39   3e-06

>gb|EFL01765.1| conserved hypothetical protein, partial [Streptomyces sp. SPB78]
          Length = 69

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 37/69 (53%), Positives = 41/69 (59%)
 Frame = -2

Query: 263 RPLSPARRRRLGEPLPHQLPDTISPDPKPANL*AQPDARSWSHLVLPSLSAGYPRVRGTL 84
           RPL PA RRRLGEPLPHQL D     P P  L    DA+   + VL  +S   PRV+G L
Sbjct: 1   RPLRPATRRRLGEPLPHQLADRPRAHPAPPELSTAKDAQGSEYPVLDPVSRACPRVQGRL 60

Query: 83  AIHYSPVRH 57
              YSPVRH
Sbjct: 61  PTCYSPVRH 69


>gb|EFK98589.1| conserved hypothetical protein, partial [Streptomyces sp. SPB78]
           gi|302430310|gb|EFL02126.1| conserved hypothetical
           protein, partial [Streptomyces sp. SPB78]
          Length = 62

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 32/62 (51%), Positives = 36/62 (58%)
 Frame = -2

Query: 242 RRRLGEPLPHQLPDTISPDPKPANL*AQPDARSWSHLVLPSLSAGYPRVRGTLAIHYSPV 63
           RRRLGEPLPHQL D     P P  L    DA+   + VL  +S   PRV+G L   YSPV
Sbjct: 1   RRRLGEPLPHQLADRPRAHPAPPELSTTKDAQGSEYPVLDPVSRACPRVQGRLPTCYSPV 60

Query: 62  RH 57
           RH
Sbjct: 61  RH 62


>gb|EGD40054.1| hypothetical protein NBCG_05699 [Nocardioidaceae bacterium Broad-1]
          Length = 86

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 20/32 (62%), Positives = 22/32 (68%)
 Frame = -1

Query: 150 QVVVSSGITQPFGWLSQSSGYISDTLLTRAPL 55
           Q VV SGI   F WLSQS G I+  LLTR+PL
Sbjct: 42  QEVVVSGINHRFRWLSQSLGQITHVLLTRSPL 73



 Score = 38.1 bits (87), Expect(2) = 3e-06
 Identities = 21/36 (58%), Positives = 24/36 (66%)
 Frame = -3

Query: 259 LSVRLGVEGLVSRYLTNYLIPYRLIPNRRTFEHNLM 152
           LS RL VE LVS YLTN LI    IP R+TF ++ M
Sbjct: 6   LSGRLPVEALVSHYLTNKLIGREHIPGRKTFHNHPM 41


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