BLASTX nr result

ID: Cinnamomum25_contig00040366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00040366
         (213 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein A...    57   5e-06
emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]    56   8e-06

>ref|XP_008351012.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 685

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +3

Query: 24  KASLSNLPVY*YIMSLFKMPKAVVERVDRICRNFL*KGQGDNKKLHLLKSSEVIKPK*SG 203
           +A L +LPVY   MSLFK+P  V+ +++++   FL +G G+ KK HL+K  +V K K  G
Sbjct: 262 QAVLGSLPVY--YMSLFKVPCGVIRKLEKLMNGFLWEGVGEGKKFHLVKWGDVCKSKEDG 319

Query: 204 GLG 212
           GLG
Sbjct: 320 GLG 322


>emb|CAN78776.1| hypothetical protein VITISV_029750 [Vitis vinifera]
          Length = 763

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 30/63 (47%), Positives = 44/63 (69%)
 Frame = +3

Query: 24  KASLSNLPVY*YIMSLFKMPKAVVERVDRICRNFL*KGQGDNKKLHLLKSSEVIKPK*SG 203
           K++L+NLPVY   +SLF+MPK VV+R++++ R+FL  G    +K+HL+    V   K SG
Sbjct: 350 KSTLANLPVY--QLSLFRMPKLVVKRLEKLQRDFLWGGGSMERKIHLINWEVVCSQKESG 407

Query: 204 GLG 212
           GLG
Sbjct: 408 GLG 410


Top