BLASTX nr result

ID: Cinnamomum25_contig00040127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00040127
         (289 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010256141.1| PREDICTED: nucleoporin nup211-like [Nelumbo ...    74   3e-11
ref|XP_008813073.1| PREDICTED: rootletin [Phoenix dactylifera] g...    56   8e-06

>ref|XP_010256141.1| PREDICTED: nucleoporin nup211-like [Nelumbo nucifera]
          Length = 2023

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 50/105 (47%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
 Frame = -2

Query: 288  KHGLTMKDIQLDHIXXXXXXXXXS--YGMGCRQNAEAEDGMLELWETAEENFNFKPTRKL 115
            K GLTM+DI LD +            YG   R N E +D MLELWETAE + +F PT KL
Sbjct: 1730 KDGLTMRDIPLDQVSECSSYDHGIGSYGTSKRGNGETDDEMLELWETAERDSSFDPTVKL 1789

Query: 114  L----ASDRANKD---VEAVAEDKSEYLSSESQPEKELEVYNPEV 1
            +    +S +AN +   VE V + KSEY SSE Q EKEL V   EV
Sbjct: 1790 IPKPVSSMQANTECHQVETVDDQKSEYPSSELQVEKELGVDKLEV 1834


>ref|XP_008813073.1| PREDICTED: rootletin [Phoenix dactylifera]
            gi|672186408|ref|XP_008813074.1| PREDICTED: rootletin
            [Phoenix dactylifera] gi|672186412|ref|XP_008813075.1|
            PREDICTED: rootletin [Phoenix dactylifera]
            gi|672186416|ref|XP_008813076.1| PREDICTED: rootletin
            [Phoenix dactylifera] gi|672186420|ref|XP_008813077.1|
            PREDICTED: rootletin [Phoenix dactylifera]
          Length = 1793

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = -2

Query: 288  KHGLTMKDIQLDHIXXXXXXXXXS--YGMGCRQNAEAEDGMLELWETAEENFNFKPTRKL 115
            K+   MKDIQLD +            YG+    +AE +D ML+LWETAE + N    +  
Sbjct: 1512 KYEQRMKDIQLDQVSSSSQHGNGVGSYGLSRIHDAEIDDQMLQLWETAESDCNDGTWK-- 1569

Query: 114  LASDRANKDVEAVAEDKSEYLSSESQPEKELEVYNPEV 1
             +S     D++AV EDK E  SSE   EKEL +   E+
Sbjct: 1570 ASSVAMEYDIQAVEEDKGESPSSELVTEKELAIDKLEI 1607


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