BLASTX nr result
ID: Cinnamomum25_contig00039465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00039465
(297 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010935993.1| PREDICTED: pentatricopeptide repeat-containi... 150 4e-34
ref|XP_008776505.1| PREDICTED: pentatricopeptide repeat-containi... 148 1e-33
ref|XP_010243684.1| PREDICTED: pentatricopeptide repeat-containi... 143 5e-32
emb|CDP06172.1| unnamed protein product [Coffea canephora] 137 3e-30
ref|XP_012087447.1| PREDICTED: pentatricopeptide repeat-containi... 136 6e-30
gb|KDP46908.1| hypothetical protein JCGZ_10399 [Jatropha curcas] 136 6e-30
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,... 136 6e-30
ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi... 136 6e-30
ref|XP_009408480.1| PREDICTED: pentatricopeptide repeat-containi... 134 2e-29
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi... 134 3e-29
ref|XP_008229419.1| PREDICTED: pentatricopeptide repeat-containi... 133 4e-29
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr... 133 4e-29
ref|XP_008353671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 132 9e-29
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam... 132 9e-29
ref|XP_002306741.1| pentatricopeptide repeat-containing family p... 132 1e-28
gb|KDO60957.1| hypothetical protein CISIN_1g046039mg [Citrus sin... 130 3e-28
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ... 130 3e-28
ref|XP_010313232.1| PREDICTED: pentatricopeptide repeat-containi... 130 3e-28
ref|XP_010313231.1| PREDICTED: pentatricopeptide repeat-containi... 130 3e-28
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi... 130 3e-28
>ref|XP_010935993.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Elaeis guineensis]
Length = 533
Score = 150 bits (378), Expect = 4e-34
Identities = 74/99 (74%), Positives = 81/99 (81%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFT 118
TKC+N+RDL QLH+Q+IKTGLA DTIA+SRVLAFCATSP GD+NYAMLLFSH HPN F
Sbjct: 29 TKCTNMRDLHQLHSQIIKTGLAKDTIAISRVLAFCATSPYGDLNYAMLLFSHQPHPNAFM 88
Query: 117 WNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
WNT+IRG S SS P AIS F M LHSP QPQR TYPS
Sbjct: 89 WNTLIRGLSQSSTPHLAISHFVDM-LHSPTQPQRTTYPS 126
>ref|XP_008776505.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Phoenix dactylifera]
Length = 508
Score = 148 bits (374), Expect = 1e-33
Identities = 74/99 (74%), Positives = 81/99 (81%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFT 118
TKC+N+RDL QLH+Q+IKTGLA DTIA+SRVLAFCATSP GD+NYAMLLFSH PN F
Sbjct: 4 TKCTNMRDLHQLHSQIIKTGLAKDTIAISRVLAFCATSPYGDLNYAMLLFSHHPQPNAFM 63
Query: 117 WNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
WNT+IRG S SS P AISLF M LHSP QPQR TYPS
Sbjct: 64 WNTLIRGLSRSSTPHLAISLFFDM-LHSPEQPQRTTYPS 101
>ref|XP_010243684.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Nelumbo nucifera]
Length = 547
Score = 143 bits (360), Expect = 5e-32
Identities = 71/98 (72%), Positives = 81/98 (82%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C+N+ DL++LHA +IKTGLA DTIA SRVLAF ATSP GDINYA +FS IQ+PN FTW
Sbjct: 32 RCTNMSDLQKLHAHIIKTGLAKDTIAASRVLAFSATSPAGDINYAYSVFSQIQNPNLFTW 91
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS SS P +AISLF ML SPI+PQRLTYPS
Sbjct: 92 NTIIRGFSQSSTPLRAISLFTDMLQSSPIEPQRLTYPS 129
>emb|CDP06172.1| unnamed protein product [Coffea canephora]
Length = 526
Score = 137 bits (345), Expect = 3e-30
Identities = 65/99 (65%), Positives = 79/99 (79%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFT 118
TKC+ ++DLK +HAQ+IKTGL D IA SRVLAFCATSP GD+NYA L+FS + +PN FT
Sbjct: 30 TKCTTMKDLKLIHAQLIKTGLIQDKIAASRVLAFCATSPAGDVNYAYLVFSQMDNPNLFT 89
Query: 117 WNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
WNT+IRGFS SS P ++SLF ML S +QP+RLTYPS
Sbjct: 90 WNTMIRGFSQSSSPETSLSLFVQMLESSLVQPERLTYPS 128
>ref|XP_012087447.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Jatropha curcas]
Length = 534
Score = 136 bits (342), Expect = 6e-30
Identities = 67/97 (69%), Positives = 79/97 (81%)
Frame = -1
Query: 291 CSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWN 112
C+N++DLK++H Q IKTGLA D A SR+LAFC TSP GDINYA L+F+ I +PN F WN
Sbjct: 32 CTNMKDLKKVHTQFIKTGLAKDPFAASRILAFC-TSPAGDINYAYLVFTQIHNPNLFIWN 90
Query: 111 TIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TIIRGFS SS P+ AI LF +MLL+SPIQPQRLTYPS
Sbjct: 91 TIIRGFSQSSNPQNAIYLFVNMLLNSPIQPQRLTYPS 127
>gb|KDP46908.1| hypothetical protein JCGZ_10399 [Jatropha curcas]
Length = 520
Score = 136 bits (342), Expect = 6e-30
Identities = 67/97 (69%), Positives = 79/97 (81%)
Frame = -1
Query: 291 CSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWN 112
C+N++DLK++H Q IKTGLA D A SR+LAFC TSP GDINYA L+F+ I +PN F WN
Sbjct: 18 CTNMKDLKKVHTQFIKTGLAKDPFAASRILAFC-TSPAGDINYAYLVFTQIHNPNLFIWN 76
Query: 111 TIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TIIRGFS SS P+ AI LF +MLL+SPIQPQRLTYPS
Sbjct: 77 TIIRGFSQSSNPQNAIYLFVNMLLNSPIQPQRLTYPS 113
>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 136 bits (342), Expect = 6e-30
Identities = 66/97 (68%), Positives = 81/97 (83%)
Frame = -1
Query: 291 CSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWN 112
C+ ++DLK++H+Q+IKTGLA DT A SR+LAFCA SP GDINYA L+F IQ+PN F WN
Sbjct: 32 CTTMKDLKKIHSQLIKTGLAKDTNAASRILAFCA-SPAGDINYAYLVFVQIQNPNIFAWN 90
Query: 111 TIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TIIRGFS SS+P+ +ISL+ MLL SP+QPQRLTYPS
Sbjct: 91 TIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPS 127
>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Fragaria vesca subsp. vesca]
Length = 550
Score = 136 bits (342), Expect = 6e-30
Identities = 66/98 (67%), Positives = 81/98 (82%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C+N++DL+++HA +IKTGLA+DT+A SRVLAFCA SP GDINYA ++F HI +PN F W
Sbjct: 30 QCTNMKDLQKIHAHLIKTGLANDTVAASRVLAFCA-SPAGDINYAYMVFRHIHNPNLFIW 88
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS SS P AISLF ML+ S +QPQRLTYPS
Sbjct: 89 NTIIRGFSNSSNPEAAISLFIDMLVTSTVQPQRLTYPS 126
>ref|XP_009408480.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 546
Score = 134 bits (338), Expect = 2e-29
Identities = 68/99 (68%), Positives = 79/99 (79%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFT 118
TKC+++RDL +LH+Q+IKTGLA D IA+SRVLAFCATSP GD+NYAM LF H PN F
Sbjct: 29 TKCNSMRDLHRLHSQLIKTGLARDHIAISRVLAFCATSPNGDLNYAMRLFFHHHQPNAFM 88
Query: 117 WNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
+NT+IRG S SS P AISLF M LHSPI PQRLT+PS
Sbjct: 89 YNTLIRGLSHSSTPHLAISLFLDM-LHSPIPPQRLTFPS 126
>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Citrus sinensis]
Length = 534
Score = 134 bits (336), Expect = 3e-29
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C++++DLK++HA +IKTGLA D IA SR+L FC TSP GDINYA L+F+ I+ PN F W
Sbjct: 29 QCTSMKDLKKIHAHLIKTGLAKDPIAASRILTFC-TSPAGDINYAYLVFTQIKKPNLFIW 87
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS SS PR AI LF ML+ SPIQPQRLTYPS
Sbjct: 88 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 125
>ref|XP_008229419.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Prunus mume]
Length = 533
Score = 133 bits (335), Expect = 4e-29
Identities = 64/98 (65%), Positives = 80/98 (81%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C+N++DL+++HA +IKTGL DT+A SRVLAFCA SP G+I+YA ++F HIQ+PNPF W
Sbjct: 30 QCTNMKDLQKIHAHLIKTGLVSDTVAASRVLAFCA-SPAGNISYAYMVFRHIQNPNPFIW 88
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS S P AISLF ML+ S I+PQRLTYPS
Sbjct: 89 NTIIRGFSESPTPETAISLFIDMLVTSAIEPQRLTYPS 126
>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
gi|557539373|gb|ESR50417.1| hypothetical protein
CICLE_v10031197mg [Citrus clementina]
Length = 534
Score = 133 bits (335), Expect = 4e-29
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C++++DLK++HA +IKTGL D IA SR+LAFC TSP GDINYA L+F+ I+ PN F W
Sbjct: 29 QCTSMKDLKKIHAHLIKTGLPKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIW 87
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS SS PR AI LF ML+ SPIQPQRLTYPS
Sbjct: 88 NTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 125
>ref|XP_008353671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g42920, chloroplastic-like [Malus domestica]
Length = 532
Score = 132 bits (332), Expect = 9e-29
Identities = 62/98 (63%), Positives = 81/98 (82%)
Frame = -1
Query: 294 KCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTW 115
+C +++DL+++HA ++KTGLA+DT+A SR+LAF +TSP GDINYA ++F HI+ PNPF W
Sbjct: 30 QCXSMKDLQKIHAHLLKTGLANDTVAASRILAF-STSPAGDINYACMVFRHIKEPNPFIW 88
Query: 114 NTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
NTIIRGFS S P+ AISLF ML+ S I+PQRLTYPS
Sbjct: 89 NTIIRGFSESQNPKTAISLFTEMLVASEIEPQRLTYPS 126
>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 538
Score = 132 bits (332), Expect = 9e-29
Identities = 66/97 (68%), Positives = 81/97 (83%)
Frame = -1
Query: 291 CSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWN 112
C++++DLK+LHAQ+IKTGL +D IA SRVLAFC SP GD+NYA L+F+ I++PN FTWN
Sbjct: 32 CTSMKDLKKLHAQLIKTGLVNDIIAASRVLAFCV-SPAGDMNYAYLVFTQIKNPNLFTWN 90
Query: 111 TIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TIIRGFS SS P+ AISLF ML+ S IQP+RLTYPS
Sbjct: 91 TIIRGFSQSSNPQIAISLFIDMLVGSSIQPERLTYPS 127
>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222856190|gb|EEE93737.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 509
Score = 132 bits (331), Expect = 1e-28
Identities = 67/98 (68%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 291 CSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWN 112
C++++DL+++HAQ+IKTGLA DTIA SRVLAFC TSP GDINYA L+F+ I++PN F WN
Sbjct: 6 CTSMKDLQKIHAQLIKTGLAKDTIAASRVLAFC-TSPAGDINYAYLVFTQIRNPNLFVWN 64
Query: 111 TIIRGFSLSSMPRQAISLFCHMLLHSP-IQPQRLTYPS 1
TIIRGFS SS P AISLF M+ SP QPQRLTYPS
Sbjct: 65 TIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPS 102
>gb|KDO60957.1| hypothetical protein CISIN_1g046039mg [Citrus sinensis]
Length = 502
Score = 130 bits (328), Expect = 3e-28
Identities = 66/94 (70%), Positives = 76/94 (80%)
Frame = -1
Query: 282 VRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFTWNTII 103
++DLK++HA +IKTGLA D IA SR+LAFC TSP GDINYA L+F+ I+ PN F WNTII
Sbjct: 1 MKDLKKIHAHLIKTGLAKDPIAASRILAFC-TSPAGDINYAYLVFTQIKKPNLFIWNTII 59
Query: 102 RGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
RGFS SS PR AI LF ML+ SPIQPQRLTYPS
Sbjct: 60 RGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 93
>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325851|gb|EFH56271.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 542
Score = 130 bits (328), Expect = 3e-28
Identities = 65/100 (65%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSPMGDINYAMLLFSHIQHPNPFT 118
T+CS +R+LKQ+HA +IKTGL DT+A SRVLAFC SP D NYA L+F+ I H NPF
Sbjct: 33 TRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASP-SDRNYAYLVFTRINHKNPFV 91
Query: 117 WNTIIRGFSLSSMPRQAISLFCHMLLHSP-IQPQRLTYPS 1
WNTIIRGFS SS P AIS+F ML SP ++PQRLTYPS
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPS 131
>ref|XP_010313232.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X3 [Solanum lycopersicum]
Length = 509
Score = 130 bits (327), Expect = 3e-28
Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSP-MGDINYAMLLFSHIQHPNPF 121
TKC+ + DLK++HA +IK+GL D IA SRVLAF A SP +GDINYA L+F+HI++PNPF
Sbjct: 26 TKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVFTHIENPNPF 85
Query: 120 TWNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TWNTIIRGFS SS P+ AI LF ML +S +QP LTYPS
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPS 125
>ref|XP_010313231.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X2 [Solanum lycopersicum]
Length = 514
Score = 130 bits (327), Expect = 3e-28
Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSP-MGDINYAMLLFSHIQHPNPF 121
TKC+ + DLK++HA +IK+GL D IA SRVLAF A SP +GDINYA L+F+HI++PNPF
Sbjct: 26 TKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVFTHIENPNPF 85
Query: 120 TWNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TWNTIIRGFS SS P+ AI LF ML +S +QP LTYPS
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPS 125
>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic isoform X1 [Solanum lycopersicum]
Length = 522
Score = 130 bits (327), Expect = 3e-28
Identities = 65/100 (65%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = -1
Query: 297 TKCSNVRDLKQLHAQVIKTGLAHDTIALSRVLAFCATSP-MGDINYAMLLFSHIQHPNPF 121
TKC+ + DLK++HA +IK+GL D IA SRVLAF A SP +GDINYA L+F+HI++PNPF
Sbjct: 26 TKCTTMTDLKKIHAHLIKSGLIKDKIAASRVLAFSAKSPPIGDINYANLVFTHIENPNPF 85
Query: 120 TWNTIIRGFSLSSMPRQAISLFCHMLLHSPIQPQRLTYPS 1
TWNTIIRGFS SS P+ AI LF ML +S +QP LTYPS
Sbjct: 86 TWNTIIRGFSESSTPQYAIHLFIEMLNNSQVQPHLLTYPS 125