BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00039296
         (248 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
ref|XP_009391467.1| PREDICTED: pentatricopeptide repeat-containi...   114   3e-23
gb|EMT09642.1| hypothetical protein F775_08996 [Aegilops tauschii]    113   4e-23
ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containi...   112   1e-22
dbj|BAK06078.1| predicted protein, partial [Hordeum vulgare subs...   112   1e-22
ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Go...   109   8e-22
ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containi...   109   8e-22
ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containi...   108   1e-21
gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus g...   108   1e-21
ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein...   106   7e-21
ref|XP_002885810.1| pentatricopeptide repeat-containing protein ...   105   1e-20
ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
ref|XP_010412820.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                      105   2e-20
ref|XP_006653453.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Caps...   105   2e-20
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...   105   2e-20
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...   105   2e-20
ref|XP_012444593.1| PREDICTED: pentatricopeptide repeat-containi...   104   2e-20

>ref|XP_010917211.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Elaeis guineensis]
          Length = 544

 Score =  118 bits (295), Expect = 2e-24
 Identities = 55/82 (67%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           +C+P+V TYTS+ISGYCKMGKME+A  + +EM+ + IRPS +TYNVLIDG+GKAG M +A
Sbjct: 273 LCVPNVVTYTSVISGYCKMGKMEEALEVFNEMIELGIRPSRVTYNVLIDGFGKAGDMPSA 332

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
           VSMY  M+  GC PDVVTFTSL
Sbjct: 333 VSMYERMMVCGCPPDVVTFTSL 354



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/80 (35%), Positives = 46/80 (57%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I   CK+G +++A+ +L EM   R  P   T+  LI G+   G+M  A+ 
Sbjct: 416 VPHAFIYNFVIDVLCKVGNLDEANILLLEMEEKRCSPDKFTFTSLIIGHCMKGRMVEAIG 475

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+ +GC PD VT +SL
Sbjct: 476 LFHKMVATGCAPDSVTVSSL 495


>ref|XP_009391467.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Musa acuminata subsp. malaccensis]
           gi|695009651|ref|XP_009391468.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Musa acuminata subsp. malaccensis]
          Length = 551

 Score =  114 bits (284), Expect = 3e-23
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           LP+V TYTS+ISGYCKMGKME+A  +  EM    IRPS +TYNVLIDGYGK G M +AVS
Sbjct: 283 LPNVVTYTSVISGYCKMGKMEEALGVFSEMTGAGIRPSRVTYNVLIDGYGKVGDMLSAVS 342

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           +Y  ML SGC PDVVTFTSL
Sbjct: 343 VYERMLASGCPPDVVTFTSL 362



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 29/80 (36%), Positives = 49/80 (61%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G CK G++++A+ ++ EM   R +P   TY +LI G+   G+M  A++
Sbjct: 424 MPHAFIYNPVIDGLCKCGRVDEANVVVLEMEERRCKPDKFTYTILIIGHCMKGRMAEAIA 483

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+ SGC PD +T  SL
Sbjct: 484 LFQKMVSSGCTPDSITVNSL 503



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           PD  ++  +I G C++G ++ A    D+M +    P ++T+N LIDG  +A Q+D A  +
Sbjct: 213 PDTCSFNIVIKGLCRLGDIDAAFNFSDQMRSFGCSPDMVTHNTLIDGLCRAKQLDRAQEL 272

Query: 59  YVEM-LDSGCLPDVVTFTSL 3
              + LD   LP+VVT+TS+
Sbjct: 273 LQRIQLDGSSLPNVVTYTSV 292


>gb|EMT09642.1| hypothetical protein F775_08996 [Aegilops tauschii]
          Length = 400

 Score =  113 bits (283), Expect = 4e-23
 Identities = 52/82 (63%), Positives = 67/82 (81%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           VC+P+V TYTS+ISGYCK G+MEDA  + D+MVA    P+L+TYNVLI+GYGKAG M +A
Sbjct: 134 VCMPNVVTYTSVISGYCKTGRMEDAMAVYDDMVACGTSPNLVTYNVLINGYGKAGNMGSA 193

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
           V++Y +M+   CLPDVVTF+SL
Sbjct: 194 VAVYQQMILRRCLPDVVTFSSL 215



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/78 (35%), Positives = 45/78 (57%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           P V  Y  +I   CK GK+++A+ IL EM     RP   TY +LI G+   G++  A++ 
Sbjct: 278 PQVFIYNPVIDVLCKGGKVDEANMILMEMEEKGCRPDKYTYTILIIGHCMKGRIAEAITF 337

Query: 59  YVEMLDSGCLPDVVTFTS 6
           + +M+++GC PD +   S
Sbjct: 338 FHKMVETGCSPDSIVVNS 355


>ref|XP_008786659.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
           gi|672199245|ref|XP_008777563.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like [Phoenix dactylifera]
          Length = 546

 Score =  112 bits (280), Expect = 1e-22
 Identities = 52/82 (63%), Positives = 66/82 (80%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           +C+P+V TYTS+ISGYCKMGKME+A  +  +M+ + IRPS +TYNVLIDG+GKA  M +A
Sbjct: 275 LCVPNVVTYTSVISGYCKMGKMEEAFEVFSDMIGLGIRPSRVTYNVLIDGFGKASDMPSA 334

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
           VS+Y  M+  GC PDVVTFTSL
Sbjct: 335 VSVYEGMMVCGCPPDVVTFTSL 356



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G CK+G +++A+ +L EM   R  P   TY  LI G+   G+M  A+ 
Sbjct: 418 VPRAFIYNFVIDGLCKVGNLDEANLLLLEMEEKRCSPDKFTYTSLIIGHCMKGRMVEAIG 477

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+ +GC PD VT +SL
Sbjct: 478 LFHKMVATGCAPDSVTVSSL 497



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIR-IRPSLITYNVLIDGYGKAGQMDAAVS 63
           P+V T++ +IS  CK  ++ +AS  L E+   R I P    YN +IDG  K G +D A  
Sbjct: 383 PNVYTFSIVISSLCKKNRISEASHFLKELSERRDIVPRAFIYNFVIDGLCKVGNLDEANL 442

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           + +EM +  C PD  T+TSL
Sbjct: 443 LLLEMEEKRCSPDKFTYTSL 462


>dbj|BAK06078.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  112 bits (279), Expect = 1e-22
 Identities = 50/82 (60%), Positives = 68/82 (82%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           VC+P+V TYTS+ISGYCK G+MEDA  + ++MVA+   P+++TYNVLI+GYGKAG M +A
Sbjct: 300 VCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSA 359

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
           V++Y +M+   CLPDVVTF+SL
Sbjct: 360 VAVYQQMILRRCLPDVVTFSSL 381



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/78 (35%), Positives = 44/78 (56%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           P    Y  +I   CK GK+++A+ IL EM     RP   TY +LI G+   G++  AV+ 
Sbjct: 444 PQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTF 503

Query: 59  YVEMLDSGCLPDVVTFTS 6
           + +M+++GC PD +   S
Sbjct: 504 FHKMVETGCSPDSIVVNS 521


>ref|XP_012089183.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Jatropha curcas] gi|643708689|gb|KDP23605.1|
           hypothetical protein JCGZ_23438 [Jatropha curcas]
          Length = 545

 Score =  110 bits (276), Expect = 3e-22
 Identities = 51/81 (62%), Positives = 65/81 (80%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISG+CK GKME+AS + DEM+   I+P++ T+NVLIDG+GK G MDAA 
Sbjct: 279 CSPDVVTYTSVISGFCKPGKMEEASVLFDEMIRSGIKPNVFTFNVLIDGFGKIGDMDAAE 338

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
           ++  +M+  GCLPDVVTFTSL
Sbjct: 339 AVREKMVSFGCLPDVVTFTSL 359



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 30/80 (37%), Positives = 49/80 (61%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK G +++A+ I+ EM   R  P  IT+N+LI G+   G+M+ A+ 
Sbjct: 420 VPKPFVYNPVIDGFCKAGNVDEANLIVMEMEEKRCNPDKITFNILIIGHCMKGRMNEAID 479

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+  GC PD +T  SL
Sbjct: 480 IFSKMVAIGCAPDSITINSL 499



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 35/116 (30%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLI------------- 105
           CLPDV T+TS+I GYC+ G++     I D M A+ + P++ TY +LI             
Sbjct: 349 CLPDVVTFTSLIDGYCRSGQVYLGLKIWDAMKAMGVPPNVYTYAILINALCKENRLHEAR 408

Query: 104 ----------------------DGYGKAGQMDAAVSMYVEMLDSGCLPDVVTFTSL 3
                                 DG+ KAG +D A  + +EM +  C PD +TF  L
Sbjct: 409 DFLRQLKFSNVVPKPFVYNPVIDGFCKAGNVDEANLIVMEMEEKRCNPDKITFNIL 464


>gb|KJB83000.1| hypothetical protein B456_013G224200, partial [Gossypium raimondii]
          Length = 533

 Score =  109 bits (272), Expect = 8e-22
 Identities = 50/81 (61%), Positives = 64/81 (79%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C P+V TYTS+ISGYCK+GKME AS + DEM++    PS++T+NVLIDG+GK G M +A 
Sbjct: 292 CAPNVVTYTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAK 351

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
           S+Y +M   GC+PDVVTFTSL
Sbjct: 352 SLYEKMASFGCIPDVVTFTSL 372



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/80 (36%), Positives = 48/80 (60%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    +  +I G+CK G +++A+ I+ EM   +  P  +T+ +LI G+   G+M  A+S
Sbjct: 433 VPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKKCDPDKVTFTILIIGHCMKGRMLKAIS 492

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +ML  GC PD VT  SL
Sbjct: 493 IFDKMLSVGCPPDYVTVRSL 512


>ref|XP_012462981.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260519|ref|XP_012462982.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|823260521|ref|XP_012462983.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           [Gossypium raimondii] gi|823260523|ref|XP_012462984.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000 [Gossypium raimondii]
           gi|763816146|gb|KJB82998.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
           gi|763816147|gb|KJB82999.1| hypothetical protein
           B456_013G224200 [Gossypium raimondii]
          Length = 524

 Score =  109 bits (272), Expect = 8e-22
 Identities = 50/81 (61%), Positives = 64/81 (79%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C P+V TYTS+ISGYCK+GKME AS + DEM++    PS++T+NVLIDG+GK G M +A 
Sbjct: 283 CAPNVVTYTSVISGYCKLGKMEKASALFDEMMSSGTLPSVVTFNVLIDGFGKVGDMLSAK 342

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
           S+Y +M   GC+PDVVTFTSL
Sbjct: 343 SLYEKMASFGCIPDVVTFTSL 363



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 29/80 (36%), Positives = 48/80 (60%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    +  +I G+CK G +++A+ I+ EM   +  P  +T+ +LI G+   G+M  A+S
Sbjct: 424 VPKPFIFNPVIDGFCKAGNLDEANRIVAEMEKKKCDPDKVTFTILIIGHCMKGRMLKAIS 483

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +ML  GC PD VT  SL
Sbjct: 484 IFDKMLSVGCPPDYVTVRSL 503


>ref|XP_010047479.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           [Eucalyptus grandis]
          Length = 598

 Score =  108 bits (271), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 65/79 (82%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           PDV TYTS+ISG CK+G+ME+AS + +EM +  IRPS +T+NVLI+G+GKAG M +A+SM
Sbjct: 333 PDVVTYTSVISGCCKLGRMEEASLLFEEMNSSGIRPSTVTFNVLINGFGKAGNMSSALSM 392

Query: 59  YVEMLDSGCLPDVVTFTSL 3
           Y +ML  GC PDVVTFTSL
Sbjct: 393 YDKMLSVGCYPDVVTFTSL 411



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  ++ G+CK G +++A+ IL EM     RP  +T+ +LI G+   G+M  A+ 
Sbjct: 472 VPKPFIYNPVMDGFCKAGNVDEANIILAEMEEKGCRPDKLTFTILIIGHCMKGRMMEAMR 531

Query: 62  MYVEMLDSGCLPDVVTFTS 6
           +Y +ML  GC PD +T  S
Sbjct: 532 IYNKMLSVGCAPDSITVNS 550



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 35/116 (30%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLI------------- 105
           C PDV T+TS+I G+C++G++ +   +   M A  I P+  T++VLI             
Sbjct: 401 CYPDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTFSVLINTLCKDNRLHDAR 460

Query: 104 ----------------------DGYGKAGQMDAAVSMYVEMLDSGCLPDVVTFTSL 3
                                 DG+ KAG +D A  +  EM + GC PD +TFT L
Sbjct: 461 ECLRQLRWTDIVPKPFIYNPVMDGFCKAGNVDEANIILAEMEEKGCRPDKLTFTIL 516


>gb|KCW79406.1| hypothetical protein EUGRSUZ_C00814 [Eucalyptus grandis]
          Length = 435

 Score =  108 bits (271), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 65/79 (82%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           PDV TYTS+ISG CK+G+ME+AS + +EM +  IRPS +T+NVLI+G+GKAG M +A+SM
Sbjct: 170 PDVVTYTSVISGCCKLGRMEEASLLFEEMNSSGIRPSTVTFNVLINGFGKAGNMSSALSM 229

Query: 59  YVEMLDSGCLPDVVTFTSL 3
           Y +ML  GC PDVVTFTSL
Sbjct: 230 YDKMLSVGCYPDVVTFTSL 248



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  ++ G+CK G +++A+ IL EM     RP  +T+ +LI G+   G+M  A+ 
Sbjct: 309 VPKPFIYNPVMDGFCKAGNVDEANIILAEMEEKGCRPDKLTFTILIIGHCMKGRMMEAMR 368

Query: 62  MYVEMLDSGCLPDVVTFTS 6
           +Y +ML  GC PD +T  S
Sbjct: 369 IYNKMLSVGCAPDSITVNS 387



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 35/116 (30%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLI------------- 105
           C PDV T+TS+I G+C++G++ +   +   M A  I P+  T++VLI             
Sbjct: 238 CYPDVVTFTSLIDGHCRVGQVNEGLKLWRLMSARNISPNAYTFSVLINTLCKDNRLHDAR 297

Query: 104 ----------------------DGYGKAGQMDAAVSMYVEMLDSGCLPDVVTFTSL 3
                                 DG+ KAG +D A  +  EM + GC PD +TFT L
Sbjct: 298 ECLRQLRWTDIVPKPFIYNPVMDGFCKAGNVDEANIILAEMEEKGCRPDKLTFTIL 353


>ref|XP_007012633.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508782996|gb|EOY30252.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 592

 Score =  106 bits (264), Expect = 7e-21
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISGYCK+GKM++AS +  EM++    P+++T+NVLIDG+GK G M +A 
Sbjct: 325 CSPDVVTYTSVISGYCKLGKMDEASALFHEMISSGTVPTVVTFNVLIDGFGKVGDMVSAK 384

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
           SMY +M   GC+ DVVTFTSL
Sbjct: 385 SMYEQMASFGCIADVVTFTSL 405



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 29/80 (36%), Positives = 48/80 (60%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    +  +I G+CK G +++A+ I+ EM   +  P  +T+ +LI G+   G+M  A+S
Sbjct: 466 VPKPFIFNPVIDGFCKAGNLDEANLIVAEMEEKQCHPDKVTFTILIIGHCMKGRMFEAIS 525

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +ML  GC PD VT  SL
Sbjct: 526 IFNKMLSVGCTPDDVTVNSL 545



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/79 (37%), Positives = 43/79 (54%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           P+V T+   I+  CK  ++ +A   L E+    I P    +N +IDG+ KAG +D A  +
Sbjct: 432 PNVYTFAITINALCKENRLHEARGFLRELQCRNIVPKPFIFNPVIDGFCKAGNLDEANLI 491

Query: 59  YVEMLDSGCLPDVVTFTSL 3
             EM +  C PD VTFT L
Sbjct: 492 VAEMEEKQCHPDKVTFTIL 510


>ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331650|gb|EFH62069.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 536

 Score =  105 bits (262), Expect = 1e-20
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISGYCK GKM++AS +LD+M+ + I P+ +T+NVL+DGY KAG+M  A 
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAE 332

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
            +  +M+  GC PDVVTFTSL
Sbjct: 333 EIRGKMISFGCFPDVVTFTSL 353



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/80 (38%), Positives = 50/80 (62%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK GK+ +A  I++EM   + +P  IT+ +LI G+   G+M  AVS
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+  GC PD +T +SL
Sbjct: 474 IFHKMVAIGCSPDKITVSSL 493



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 DVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSMY 57
           D +T+  +I G C +GK E A  +L  M      P ++TYN LI G+ K+ ++  A  M+
Sbjct: 205 DTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMF 264

Query: 56  VEM-LDSGCLPDVVTFTSL 3
            ++   SGC PDVVT+TS+
Sbjct: 265 DDVKSSSGCSPDVVTYTSM 283


>ref|XP_011648579.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis sativus]
           gi|778665517|ref|XP_011648580.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X1 [Cucumis sativus]
          Length = 588

 Score =  105 bits (261), Expect = 2e-20
 Identities = 52/79 (65%), Positives = 63/79 (79%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           PDV TYTSIISGYCK+G M+ AS + DEMV+  I+P+  T+NVLIDG+GK G M +A+ M
Sbjct: 323 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 382

Query: 59  YVEMLDSGCLPDVVTFTSL 3
           Y +ML  GCLPDVVTFTSL
Sbjct: 383 YEKMLLLGCLPDVVTFTSL 401



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/80 (37%), Positives = 49/80 (61%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK GK+++A+ I+ EM   + RP  IT+ +LI G    G+M  A+S
Sbjct: 462 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIS 521

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
            + +M++  C+PD +T  SL
Sbjct: 522 TFYKMIEINCVPDEITINSL 541



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 35/116 (30%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLI------------- 105
           CLPDV T+TS+I GYC+ G++     + +EM    + P++ TY VLI             
Sbjct: 391 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 450

Query: 104 ----------------------DGYGKAGQMDAAVSMYVEMLDSGCLPDVVTFTSL 3
                                 DG+ KAG++D A  +  EM +  C PD +TFT L
Sbjct: 451 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 506


>ref|XP_010412820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Camelina sativa]
           gi|727417284|ref|XP_010412827.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like [Camelina sativa]
          Length = 538

 Score =  105 bits (261), Expect = 2e-20
 Identities = 49/81 (60%), Positives = 62/81 (76%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISGYCK GKM++AS +LD+M+   I P+ IT+NVL+DGY KAG+M  A 
Sbjct: 275 CSPDVVTYTSMISGYCKAGKMQEASRLLDDMLCFGICPTTITFNVLVDGYAKAGEMPCAE 334

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
            +  +M+  GC PDVVTFTSL
Sbjct: 335 DIRGKMISFGCFPDVVTFTSL 355



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -1

Query: 224 YTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSMYVEML 45
           Y  +I G+CK GK+ +A+ I++EM   + +P  IT+ +LI G+   G+M  AVS++ +M+
Sbjct: 422 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 481

Query: 44  DSGCLPDVVTFTSL 3
             GC PD +T  SL
Sbjct: 482 AIGCSPDKITVNSL 495



 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
 Frame = -1

Query: 236 DVRTYTSIISGYCKMGKMEDASCILDEM-VAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           D +T+  +I G C +GK E A  +  EM  +    P ++TYN LI G+ K+ ++  A  M
Sbjct: 206 DTKTFNILIRGLCCVGKAEKALELFGEMRSSFGCSPDIVTYNTLIKGFCKSNELARANEM 265

Query: 59  YVEM-LDSGCLPDVVTFTSL 3
             ++   SGC PDVVT+TS+
Sbjct: 266 LNDVKSSSGCSPDVVTYTSM 285


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score =  105 bits (261), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           VC PDV TYTS+ISGYCK GKM +AS +LD+M+ + I P+ +T+NVL+DGY KAG+M  A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
             +  +M+  GC PDVVTFTSL
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSL 353



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK GK+ +A+ I++EM   + +P  IT+ +LI G+   G+M  AVS
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+  GC PD +T +SL
Sbjct: 474 IFHKMVAIGCSPDKITVSSL 493



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 DVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSMY 57
           D +T+  +I G C +GK E A  +L  M      P ++TYN LI G+ K+ +++ A  M+
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264

Query: 56  VEMLD-SGCLPDVVTFTSL 3
            ++   S C PDVVT+TS+
Sbjct: 265 KDVKSGSVCSPDVVTYTSM 283


>ref|XP_006653453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Oryza brachyantha]
          Length = 516

 Score =  105 bits (261), Expect = 2e-20
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           VC+P+V T+TS+ISGYCK GKMEDA  + D+MV     P+ +TYNVLI+GYGK G M +A
Sbjct: 250 VCMPNVVTFTSVISGYCKAGKMEDAMAVYDDMVVSGTMPNAVTYNVLINGYGKVGDMGSA 309

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
           V +Y +M+   C PDVVTF+SL
Sbjct: 310 VQVYQQMMRLRCPPDVVTFSSL 331


>ref|XP_006297396.1| hypothetical protein CARUB_v10013421mg [Capsella rubella]
           gi|565479514|ref|XP_006297397.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
           gi|482566105|gb|EOA30294.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
           gi|482566106|gb|EOA30295.1| hypothetical protein
           CARUB_v10013421mg [Capsella rubella]
          Length = 535

 Score =  105 bits (261), Expect = 2e-20
 Identities = 48/81 (59%), Positives = 63/81 (77%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISGYCK GKM++A  +LD+M+ + I P+ IT+NVL+DGY KAG+M +A 
Sbjct: 274 CSPDVVTYTSMISGYCKAGKMQEAYLLLDDMLGLGIYPTTITFNVLVDGYAKAGEMTSAE 333

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
            +  +M+  GC PDVVTFTSL
Sbjct: 334 DIRGKMISFGCFPDVVTFTSL 354



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 48/74 (64%)
 Frame = -1

Query: 224 YTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSMYVEML 45
           Y  +I G+CK GK+ +A+ I++EM   + +P  IT+ +LI G+   G+M  AVS++ +M+
Sbjct: 421 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 480

Query: 44  DSGCLPDVVTFTSL 3
             GC PD +T  SL
Sbjct: 481 AIGCSPDKITVNSL 494



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C  D +T+  +I G C +GK E A  +L EM      P ++TYN LI G+ K+ ++  A 
Sbjct: 203 CCNDTKTFNILIRGLCSVGKGEKALELLGEMSGFGCSPDIVTYNTLIKGFCKSNELAKAN 262

Query: 65  SMYVEM-LDSGCLPDVVTFTSL 3
            M  ++   SGC PDVVT+TS+
Sbjct: 263 EMLNDVKSSSGCSPDVVTYTSM 284


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g06000
           isoform X2 [Cucumis sativus]
           gi|778665521|ref|XP_011648581.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g06000
           isoform X2 [Cucumis sativus]
          Length = 548

 Score =  105 bits (261), Expect = 2e-20
 Identities = 52/79 (65%), Positives = 63/79 (79%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           PDV TYTSIISGYCK+G M+ AS + DEMV+  I+P+  T+NVLIDG+GK G M +A+ M
Sbjct: 283 PDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVM 342

Query: 59  YVEMLDSGCLPDVVTFTSL 3
           Y +ML  GCLPDVVTFTSL
Sbjct: 343 YEKMLLLGCLPDVVTFTSL 361



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/80 (37%), Positives = 49/80 (61%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK GK+++A+ I+ EM   + RP  IT+ +LI G    G+M  A+S
Sbjct: 422 VPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAIS 481

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
            + +M++  C+PD +T  SL
Sbjct: 482 TFYKMIEINCVPDEITINSL 501



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 35/116 (30%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLI------------- 105
           CLPDV T+TS+I GYC+ G++     + +EM    + P++ TY VLI             
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 104 ----------------------DGYGKAGQMDAAVSMYVEMLDSGCLPDVVTFTSL 3
                                 DG+ KAG++D A  +  EM +  C PD +TFT L
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTIL 466


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42570711|ref|NP_973429.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
           [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330250896|gb|AEC05990.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330250897|gb|AEC05991.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score =  105 bits (261), Expect = 2e-20
 Identities = 49/82 (59%), Positives = 63/82 (76%)
 Frame = -1

Query: 248 VCLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAA 69
           VC PDV TYTS+ISGYCK GKM +AS +LD+M+ + I P+ +T+NVL+DGY KAG+M  A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331

Query: 68  VSMYVEMLDSGCLPDVVTFTSL 3
             +  +M+  GC PDVVTFTSL
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSL 353



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 31/80 (38%), Positives = 51/80 (63%)
 Frame = -1

Query: 242 LPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVS 63
           +P    Y  +I G+CK GK+ +A+ I++EM   + +P  IT+ +LI G+   G+M  AVS
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473

Query: 62  MYVEMLDSGCLPDVVTFTSL 3
           ++ +M+  GC PD +T +SL
Sbjct: 474 IFHKMVAIGCSPDKITVSSL 493



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 DVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSMY 57
           D +T+  +I G C +GK E A  +L  M      P ++TYN LI G+ K+ +++ A  M+
Sbjct: 205 DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMF 264

Query: 56  VEMLD-SGCLPDVVTFTSL 3
            ++   S C PDVVT+TS+
Sbjct: 265 KDVKSGSVCSPDVVTYTSM 283


>ref|XP_012444593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Gossypium raimondii]
          Length = 583

 Score =  104 bits (260), Expect = 2e-20
 Identities = 50/81 (61%), Positives = 62/81 (76%)
 Frame = -1

Query: 245 CLPDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAV 66
           C PDV TYTS+ISGYCK+GKM  AS +L+EM+     PS +T+NVLIDG+GK G M +A 
Sbjct: 325 CSPDVVTYTSVISGYCKLGKMGKASALLNEMINSGTVPSAVTFNVLIDGFGKVGDMLSAK 384

Query: 65  SMYVEMLDSGCLPDVVTFTSL 3
           SMY +M+  GC+ DVVTFTSL
Sbjct: 385 SMYEKMVSFGCVADVVTFTSL 405



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%)
 Frame = -1

Query: 239 PDVRTYTSIISGYCKMGKMEDASCILDEMVAIRIRPSLITYNVLIDGYGKAGQMDAAVSM 60
           P+V T++ II+  CK  ++ +A  +L E+    I P    +N +IDG+ K+G +D A  +
Sbjct: 432 PNVYTFSIIINALCKENRLHEARELLKELTCTNIVPKPFIFNPVIDGFCKSGNLDEANLI 491

Query: 59  YVEMLDSGCLPDVVTFTSL 3
            VEM +  C PD VT+T L
Sbjct: 492 AVEMKEKKCYPDKVTYTIL 510