BLASTX nr result
ID: Cinnamomum25_contig00037700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00037700
(446 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 102 1e-32
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 102 1e-32
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 103 2e-32
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 103 2e-32
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 98 4e-32
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 98 4e-32
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 98 5e-32
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 102 5e-32
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g... 103 5e-32
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 101 1e-31
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 102 1e-31
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 94 1e-31
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 99 1e-31
emb|CDP17738.1| unnamed protein product [Coffea canephora] 91 2e-31
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 95 3e-31
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ... 95 3e-31
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 100 3e-31
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 101 3e-31
emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus v... 91 7e-31
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 94 1e-30
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 102 bits (254), Expect(2) = 1e-32
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK +RHYT+ TP +
Sbjct: 518 KYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQ 577
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 578 NGVAERMNRTIISKARCMLSNAGLPKQFWAE 608
Score = 63.9 bits (154), Expect(2) = 1e-32
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT +ND S KVW Y L+ K Q F
Sbjct: 464 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYMMTIVNDYSRKVWPYFLKHKYQAF 522
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 102 bits (254), Expect(2) = 1e-32
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK +RHYT+ TP +
Sbjct: 350 KYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHYTVPHTPQQ 409
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 410 NGVAERMNRTIISKARCMLSNAGLPKQFWAE 440
Score = 63.9 bits (154), Expect(2) = 1e-32
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT +ND S KVW Y L+ K Q F
Sbjct: 296 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYMMTIVNDYSRKVWPYFLKHKYQAF 354
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 103 bits (257), Expect(2) = 2e-32
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK VRHYT+ TP +
Sbjct: 740 KYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ 799
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 800 NGVAERMNRTIISKARCLLSNAGLPKQFWAE 830
Score = 62.0 bits (149), Expect(2) = 2e-32
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K Q F
Sbjct: 686 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-TRYMMTIVDDYSRKVWPYFLKHKYQAF 744
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 103 bits (257), Expect(2) = 2e-32
Identities = 49/91 (53%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK VRHYT+ TP +
Sbjct: 533 KYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ 592
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 593 NGVAERMNRTIISKARCLLSNAGLPKQFWAE 623
Score = 62.0 bits (149), Expect(2) = 2e-32
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K Q F
Sbjct: 479 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-TRYMMTIVDDYSRKVWPYFLKHKYQAF 537
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 97.8 bits (242), Expect(2) = 4e-32
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F KV++E+QT KV+ LRT+NG E+ S F +YC+ VRH+TI TP +NGVA
Sbjct: 529 FTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVA 588
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ RARC+L A ++K FWA+
Sbjct: 589 ERMNRTIISRARCMLSHARMNKRFWAE 615
Score = 67.0 bits (162), Expect(2) = 4e-32
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKG LDYVH+ +WG SK S GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 471 VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG-ARYMLTIIDDYSRKVWPYFLKHKDDTF 529
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 97.8 bits (242), Expect(2) = 4e-32
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F KV++E+QT KV+ LRT+NG E+ S F +YC+ VRH+TI TP +NGVA
Sbjct: 529 FTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVA 588
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ RARC+L A ++K FWA+
Sbjct: 589 ERMNRTIISRARCMLSHARMNKRFWAE 615
Score = 67.0 bits (162), Expect(2) = 4e-32
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKG LDYVH+ +WG SK S GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 471 VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG-ARYMLTIIDDYSRKVWPYFLKHKDDTF 529
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 97.8 bits (242), Expect(2) = 5e-32
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F KV++E+QT KV+ LRT+NG E+ S F +YC+ VRH+TI TP +NGVA
Sbjct: 529 FTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVA 588
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ RARC+L A ++K FWA+
Sbjct: 589 ERMNRTIISRARCMLSHARMNKRFWAE 615
Score = 66.6 bits (161), Expect(2) = 5e-32
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKG LDYVH+ +WG SK S GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 471 VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG-ARYMLTVIDDYSRKVWPYFLKHKDDTF 529
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 102 bits (254), Expect(2) = 5e-32
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG ++ S F++YCK VRHYT+ TP +
Sbjct: 494 KYQAFDVFKEWKTMVERQTERKVKILRTDNGMDFCSKIFKSYCKSEGIVRHYTVPHTPQQ 553
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 554 NGVAERMNRTIISKARCMLSNAGLPKQFWAE 584
Score = 62.0 bits (149), Expect(2) = 5e-32
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K Q F
Sbjct: 440 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYMMTIVDDYSRKVWPYFLKHKYQAF 498
>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
Japonica Group]
Length = 778
Score = 103 bits (258), Expect(2) = 5e-32
Identities = 50/91 (54%), Positives = 66/91 (72%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK VRHYTI TP +
Sbjct: 499 KYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQ 558
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 559 NGVAERMNRTIISKARCMLSNAGLPKQFWAE 589
Score = 60.5 bits (145), Expect(2) = 5e-32
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + ++MT ++D S KVW Y L+ K Q F
Sbjct: 445 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYIMTIVDDYSRKVWPYFLKHKYQAF 503
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 101 bits (251), Expect(2) = 1e-31
Identities = 48/91 (52%), Positives = 65/91 (71%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E+ S F++YCK VRHYT+ TP +
Sbjct: 533 KYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ 592
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNR I+ +ARC+L AGL K+FWA+
Sbjct: 593 NGVAERMNRIIISKARCMLSNAGLPKQFWAE 623
Score = 62.0 bits (149), Expect(2) = 1e-31
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K Q F
Sbjct: 479 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYMMTIVDDYSRKVWPYFLKHKYQAF 537
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 102 bits (254), Expect(2) = 1e-31
Identities = 46/91 (50%), Positives = 64/91 (70%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ F F + K +VE+QT KV+ LRT+NG E+ S +F++YC+ VRHYT+ TP +
Sbjct: 472 KFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFKSYCRSEGIVRHYTVSHTPQQ 531
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGV ERMNRTI+ +ARC+L AGL + FWA+
Sbjct: 532 NGVVERMNRTIISKARCMLSNAGLPRRFWAE 562
Score = 60.5 bits (145), Expect(2) = 1e-31
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K + F
Sbjct: 418 VKFTTSTHTTEGILDYVHSDLWGPARKRSFGG-ARYMMTIVDDYSRKVWPYFLKHKFEAF 476
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 94.4 bits (233), Expect(2) = 1e-31
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F + KV++E+QT +V+ LRT+N E+ S F++YC+ VRH+TI TP +NGVA
Sbjct: 530 FAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVA 589
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ +ARC+L A ++K FWA+
Sbjct: 590 ERMNRTIISKARCMLSNARMNKRFWAE 616
Score = 68.6 bits (166), Expect(2) = 1e-31
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKGILDYVH+ +WG S+ S GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 472 VKFNTSVHRTKGILDYVHADLWGPSRKPSLGG-ARYMLTIIDDYSRKVWPYFLKHKDDTF 530
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 99.0 bits (245), Expect(2) = 1e-31
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F + K++VE QT KV+KLRT+NG E+ S F + C+ RH T+ TP +NG+A
Sbjct: 495 FLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFNSLCQKEGIARHRTVRYTPQQNGLA 554
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTILER RC+L ++GLSK FWA+
Sbjct: 555 ERMNRTILERVRCMLSSSGLSKVFWAE 581
Score = 63.9 bits (154), Expect(2) = 1e-31
Identities = 30/60 (50%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F IH T+ LDY+HS +WG S+V S GG +F +T I+D S KVW+Y L+ K +TF
Sbjct: 437 VKFAKAIHETQNQLDYIHSDLWGPSRVPSIGGARYF-LTLIDDYSRKVWIYFLKNKSETF 495
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 90.5 bits (223), Expect(2) = 2e-31
Identities = 39/84 (46%), Positives = 61/84 (72%)
Frame = +2
Query: 194 FMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVAERM 373
F++ K VE QTG K++ LRT+NG EY+S F+ C++ VRH+ + + P +NGV+E M
Sbjct: 550 FLKWKARVENQTGRKIKILRTDNGGEYKSDPFQKICQECGIVRHFIVRKIPQQNGVSEHM 609
Query: 374 NRTILERARCVLLTAGLSKEFWAK 445
N+T++E+ RC+L AGL ++FWA+
Sbjct: 610 NKTLVEKVRCMLSNAGLGRKFWAE 633
Score = 71.6 bits (174), Expect(2) = 2e-31
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQ 180
V F T IH+TKGILDYVHS VWG +K S GG +F +TFI+D S +VWV+T+++KD+
Sbjct: 489 VKFGTGIHNTKGILDYVHSDVWGPAKTPSLGGRYYF-VTFIDDFSRRVWVFTMKSKDE 545
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 94.7 bits (234), Expect(2) = 3e-31
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F KV++E+QT KV+ L T+NG E+ S F +YC+ VRH+TI TP +NGVA
Sbjct: 531 FTAFKNWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVA 590
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ RARC+L A ++K FWA+
Sbjct: 591 ERMNRTIISRARCMLSHARMNKRFWAE 617
Score = 67.0 bits (162), Expect(2) = 3e-31
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKG LDYVH+ +WG SK S GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 473 VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGG-ARYMLTIIDDYSRKVWPYFLKHKDDTF 531
>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
gi|108708632|gb|ABF96427.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1326
Score = 95.1 bits (235), Expect(2) = 3e-31
Identities = 45/87 (51%), Positives = 63/87 (72%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F + KV +E+QT +V+ LRT+NG E+ S F++YC+ VRH+TI TP +NGVA
Sbjct: 530 FAAFKEWKVRIERQTEKEVKVLRTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVA 589
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ +ARC+L A ++K FWA+
Sbjct: 590 ERMNRTIISKARCMLSNARMNKRFWAE 616
Score = 66.6 bits (161), Expect(2) = 3e-31
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKGILDYVH+ +WG S+ GG + +M+T I+D S KVW Y L+ KD TF
Sbjct: 472 VKFNTSVHRTKGILDYVHTDLWGPSRKAYLGG-ARYMLTIIDDYSRKVWPYFLKHKDDTF 530
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 99.8 bits (247), Expect(2) = 3e-31
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LRT+NG E S F++YCK VRHYT+ TP +
Sbjct: 442 KYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHYTVPHTPQQ 501
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L A L K+FWA+
Sbjct: 502 NGVAERMNRTIISKARCMLSNASLPKQFWAE 532
Score = 62.0 bits (149), Expect(2) = 3e-31
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG ++ S GG + +MMT ++D S KVW Y L+ K Q F
Sbjct: 388 VKFNTSTHTTEGILDYVHSDLWGPARKTSFGG-ARYMMTIVDDYSRKVWPYFLKHKYQAF 446
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 101 bits (251), Expect(2) = 3e-31
Identities = 48/91 (52%), Positives = 65/91 (71%)
Frame = +2
Query: 173 RIRPFFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWK 352
+ + F F + K +VE+QT KV+ LR +NG E+ S F++YCK VRHYT+ TP +
Sbjct: 354 KYQAFDVFKEWKTMVERQTERKVKILRPDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQ 413
Query: 353 NGVAERMNRTILERARCVLLTAGLSKEFWAK 445
NGVAERMNRTI+ +ARC+L AGL K+FWA+
Sbjct: 414 NGVAERMNRTIISKARCMLSNAGLPKQFWAE 444
Score = 60.5 bits (145), Expect(2) = 3e-31
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T H T+GILDYVHS +WG + S GG + +MMT I+D S KVW Y L+ K Q F
Sbjct: 300 VKFNTSTHTTEGILDYVHSDLWGPTCKTSFGG-ARYMMTIIDDYSRKVWPYFLKHKYQAF 358
>emb|CDN96898.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
Length = 813
Score = 91.3 bits (225), Expect(2) = 7e-31
Identities = 41/84 (48%), Positives = 61/84 (72%)
Frame = +2
Query: 194 FMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVAERM 373
F++ K VE TG K++ L+T+NG EY+S F N C+D VRH+T+ +TP +NGV+ERM
Sbjct: 464 FLKWKAEVENHTGRKIKVLQTDNGGEYKSDPFLNVCQDCGIVRHFTVRKTPQQNGVSERM 523
Query: 374 NRTILERARCVLLTAGLSKEFWAK 445
N+T++E+ C+L A L +EFWA+
Sbjct: 524 NKTLVEKVCCMLSNAELGREFWAE 547
Score = 69.3 bits (168), Expect(2) = 7e-31
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKD 177
V F T IH+TKGILDYVHS VWG +K S GG +F +TF++D S +VWV+T++ K+
Sbjct: 403 VKFGTAIHNTKGILDYVHSDVWGPAKTPSIGGRHYF-VTFVDDFSRRVWVFTMKNKN 458
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 93.6 bits (231), Expect(2) = 1e-30
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +2
Query: 185 FFTFMQ*KVIVEKQTGMKVEKLRTNNGKEYRSTKFENYCKDHRTVRHYTIIRTPWKNGVA 364
F F + KV++E+QT +V+ L T+NG E+ S F++YC+ VRH+TI TP +NGVA
Sbjct: 530 FAAFKERKVMIERQTEKEVKVLCTDNGGEFCSDAFDDYCRKEGIVRHHTIPYTPQQNGVA 589
Query: 365 ERMNRTILERARCVLLTAGLSKEFWAK 445
ERMNRTI+ +ARC+L A ++K FWA+
Sbjct: 590 ERMNRTIISKARCMLSNARMNKRFWAE 616
Score = 66.2 bits (160), Expect(2) = 1e-30
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +1
Query: 7 VSFKTCIHHTKGILDYVHSYVWGSSKVYSKGGMSWFMMTFINDCSMKVWVYTLRTKDQTF 186
V F T +H TKGILDYVH+ +WG S+ S GG + +M+T I+D S K W Y L+ KD TF
Sbjct: 472 VKFNTSVHRTKGILDYVHADLWGPSRKPSLGG-ARYMLTIIDDYSRKEWPYFLKHKDDTF 530