BLASTX nr result

ID: Cinnamomum25_contig00036997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036997
         (280 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...    60   7e-07
ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]    59   2e-06
ref|XP_011033877.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_002303536.1| pentatricopeptide repeat-containing family p...    58   3e-06

>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein At4g22760
           [Vitis vinifera]
          Length = 580

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 131 SWASAIRSASQQGRFKEAISLYVQMQRTHLAPTTYSVSAALKA 3
           SWA AIR ++Q G+FKEA +LYVQMQR  L PTT+++S+ALKA
Sbjct: 72  SWACAIRFSTQHGQFKEAFALYVQMQRWGLCPTTFALSSALKA 114


>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein At4g22760
           [Vitis vinifera] gi|296083555|emb|CBI23551.3| unnamed
           protein product [Vitis vinifera]
          Length = 580

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 131 SWASAIRSASQQGRFKEAISLYVQMQRTHLAPTTYSVSAALKA 3
           SWA AIR ++Q G+FKEA +LYVQMQR  L PTT+++S+ALKA
Sbjct: 72  SWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKA 114


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = -3

Query: 131 SWASAIRSASQQGRFKEAISLYVQMQRTHLAPTTYSVSAALKA 3
           SWA AIR ++Q G+FKEA +LYVQMQR  L PTT+++S+ALKA
Sbjct: 68  SWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKA 110


>ref|XP_011033877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Populus euphratica]
           gi|743871534|ref|XP_011033878.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Populus euphratica]
           gi|743871538|ref|XP_011033879.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Populus euphratica]
           gi|743871542|ref|XP_011033880.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Populus euphratica]
           gi|743871546|ref|XP_011033881.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g22760-like [Populus euphratica]
          Length = 576

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = -3

Query: 152 FEPSNVISWASAIRSASQQGRFKEAISLYVQMQRTHLAPTTYSVSAALKA 3
           F   +  SW  AIR  SQQG+FKEA+ LYVQMQR  L P+T++VS+AL+A
Sbjct: 64  FPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRA 113


>ref|XP_002303536.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222840968|gb|EEE78515.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 596

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = -3

Query: 131 SWASAIRSASQQGRFKEAISLYVQMQRTHLAPTTYSVSAALKA 3
           SW  AIR  SQQG+FKEA+ LYVQMQR  L P+T++VS+AL+A
Sbjct: 91  SWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRA 133


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