BLASTX nr result
ID: Cinnamomum25_contig00036724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00036724
(306 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010923355.1| PREDICTED: splicing factor 3B subunit 3 [Ela... 144 2e-32
ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nel... 141 1e-31
ref|XP_012090856.1| PREDICTED: pre-mRNA-splicing factor RSE1 [Ja... 138 2e-30
ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citr... 133 4e-29
gb|KDO70786.1| hypothetical protein CISIN_1g044070mg, partial [C... 131 2e-28
ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624... 131 2e-28
ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624... 131 2e-28
ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624... 131 2e-28
ref|XP_010653852.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 130 3e-28
ref|XP_010653851.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 130 3e-28
ref|XP_010653850.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 130 3e-28
ref|XP_010653849.1| PREDICTED: pre-mRNA-splicing factor prp12 is... 130 3e-28
emb|CBI29964.3| unnamed protein product [Vitis vinifera] 130 3e-28
emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera] 129 6e-28
ref|XP_010087550.1| DNA damage-binding protein 1b [Morus notabil... 126 6e-27
ref|XP_007029119.1| Cleavage and polyadenylation specificity fac... 124 2e-26
ref|XP_007029118.1| Cleavage and polyadenylation specificity fac... 124 2e-26
ref|XP_007029117.1| Cleavage and polyadenylation specificity fac... 124 2e-26
ref|XP_007029116.1| Cleavage and polyadenylation specificity fac... 124 2e-26
ref|XP_010464941.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik... 122 7e-26
>ref|XP_010923355.1| PREDICTED: splicing factor 3B subunit 3 [Elaeis guineensis]
Length = 1397
Score = 144 bits (363), Expect = 2e-32
Identities = 67/101 (66%), Positives = 82/101 (81%)
Frame = -1
Query: 306 CDTVDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTS 127
C++ H I+ +S+ EPGPLALS+ VPH+ GFAFLFR+GD LLMDLRDP N CC++R +
Sbjct: 258 CNSRTHTIHFLSRFAEPGPLALSVSAVPHLSGFAFLFRIGDVLLMDLRDPENICCIHRIN 317
Query: 126 LNLPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSDS 4
LNLP+ +EE NSIEE RG+DVDDEG+FNVAA ALLEL DS
Sbjct: 318 LNLPSVIEERNSIEESCRGLDVDDEGMFNVAACALLELRDS 358
>ref|XP_010257605.1| PREDICTED: splicing factor 3B subunit 3 [Nelumbo nucifera]
Length = 1396
Score = 141 bits (356), Expect = 1e-31
Identities = 71/101 (70%), Positives = 81/101 (80%), Gaps = 1/101 (0%)
Frame = -1
Query: 303 DTVDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSL 124
+T +H I++I Q TE GP A IVEVPH GFAFLFR GDALLMD R+P NPCCVYRT+L
Sbjct: 251 NTKEHTIHVICQYTEAGPTAFDIVEVPHANGFAFLFRDGDALLMDFRNPVNPCCVYRTTL 310
Query: 123 N-LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSDS 4
+ LPT+ EE NS+EE RG+DVDDEGIFNVAA ALLEL DS
Sbjct: 311 SLLPTSTEERNSVEEPCRGLDVDDEGIFNVAACALLELRDS 351
>ref|XP_012090856.1| PREDICTED: pre-mRNA-splicing factor RSE1 [Jatropha curcas]
Length = 1386
Score = 138 bits (347), Expect = 2e-30
Identities = 70/97 (72%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI +IS E GP+A I+EVPH GFAFLFRVGDALLMDLRD HNPCC+YRTSLN L
Sbjct: 256 EHAINVISLYVEAGPIAHDIIEVPHSNGFAFLFRVGDALLMDLRDAHNPCCIYRTSLNFL 315
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
PTAVEE N +EE R DVDD+G+FNVAA ALLEL D
Sbjct: 316 PTAVEEQNFVEESCRVHDVDDDGLFNVAACALLELRD 352
>ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citrus clementina]
gi|557532011|gb|ESR43194.1| hypothetical protein
CICLE_v10011020mg [Citrus clementina]
Length = 926
Score = 133 bits (335), Expect = 4e-29
Identities = 68/97 (70%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI ++S E GPLA S+VEVP YGFAF+FR+GDALLMDLRDPHNP CVYRTSLN L
Sbjct: 263 EHAISVLSCFFEAGPLAHSVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 322
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P A+EE N ++E R DVDDEG+FNVAA ALLEL D
Sbjct: 323 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
>gb|KDO70786.1| hypothetical protein CISIN_1g044070mg, partial [Citrus sinensis]
Length = 903
Score = 131 bits (330), Expect = 2e-28
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI ++S E GPLA +VEVP YGFAF+FR+GDALLMDLRDPHNP CVYRTSLN L
Sbjct: 263 EHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 322
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P A+EE N ++E R DVDDEG+FNVAA ALLEL D
Sbjct: 323 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
>ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624787 isoform X3 [Citrus
sinensis]
Length = 1182
Score = 131 bits (330), Expect = 2e-28
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI ++S E GPLA +VEVP YGFAF+FR+GDALLMDLRDPHNP CVYRTSLN L
Sbjct: 263 EHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 322
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P A+EE N ++E R DVDDEG+FNVAA ALLEL D
Sbjct: 323 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
>ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624787 isoform X2 [Citrus
sinensis]
Length = 1265
Score = 131 bits (330), Expect = 2e-28
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI ++S E GPLA +VEVP YGFAF+FR+GDALLMDLRDPHNP CVYRTSLN L
Sbjct: 134 EHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 193
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P A+EE N ++E R DVDDEG+FNVAA ALLEL D
Sbjct: 194 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 230
>ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624787 isoform X1 [Citrus
sinensis]
Length = 1394
Score = 131 bits (330), Expect = 2e-28
Identities = 67/97 (69%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
+HAI ++S E GPLA +VEVP YGFAF+FR+GDALLMDLRDPHNP CVYRTSLN L
Sbjct: 263 EHAISVLSCFFEAGPLAHCVVEVPRSYGFAFVFRIGDALLMDLRDPHNPSCVYRTSLNFL 322
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P A+EE N ++E R DVDDEG+FNVAA ALLEL D
Sbjct: 323 PPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRD 359
>ref|XP_010653852.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X4 [Vitis
vinifera]
Length = 1397
Score = 130 bits (327), Expect = 3e-28
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G +A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 253 IENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 312
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 313 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 349
>ref|XP_010653851.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X3 [Vitis
vinifera]
Length = 1404
Score = 130 bits (327), Expect = 3e-28
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G +A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 253 IENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 312
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 313 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 349
>ref|XP_010653850.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X2 [Vitis
vinifera]
Length = 1410
Score = 130 bits (327), Expect = 3e-28
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G +A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 266 IENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 325
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 326 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 362
>ref|XP_010653849.1| PREDICTED: pre-mRNA-splicing factor prp12 isoform X1 [Vitis
vinifera]
Length = 1417
Score = 130 bits (327), Expect = 3e-28
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G +A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 266 IENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 325
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 326 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 362
>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
Length = 1363
Score = 130 bits (327), Expect = 3e-28
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G +A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 253 IENAVRVISQYAEAGHVAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 312
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 313 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 349
>emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
Length = 1298
Score = 129 bits (325), Expect = 6e-28
Identities = 68/98 (69%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Frame = -1
Query: 297 VDHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN- 121
+++A+ +ISQ E G A SIVEVPH YGFAFLFR+GDALLMDLRD HNPCCVY+TSLN
Sbjct: 294 IENAVRVISQYAEAGHXAHSIVEVPHSYGFAFLFRIGDALLMDLRDAHNPCCVYKTSLNI 353
Query: 120 LPTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
LPT+VE+ N EE R D D++GIFNVAASALLEL D
Sbjct: 354 LPTSVEQ-NFAEESCRVHDGDEDGIFNVAASALLELKD 390
>ref|XP_010087550.1| DNA damage-binding protein 1b [Morus notabilis]
gi|587838627|gb|EXB29323.1| DNA damage-binding protein
1b [Morus notabilis]
Length = 1388
Score = 126 bits (316), Expect = 6e-27
Identities = 66/98 (67%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLN-L 118
DH+I ++SQ E GPLA IVEVPH YGFA +FRVGDA LMDLRD HNP CVYRT+LN L
Sbjct: 257 DHSISVLSQYVEDGPLAYDIVEVPHSYGFAIMFRVGDAFLMDLRDAHNPRCVYRTNLNFL 316
Query: 117 PTAVEEGNSIEELSR-GIDVDDEGIFNVAASALLELSD 7
P AV+E N +EE + +VDDEG+FNVAA ALLEL D
Sbjct: 317 PHAVDEQNFVEESCKTEHEVDDEGLFNVAACALLELRD 354
>ref|XP_007029119.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 4 [Theobroma cacao]
gi|508717724|gb|EOY09621.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 4
[Theobroma cacao]
Length = 1127
Score = 124 bits (312), Expect = 2e-26
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLNLP 115
+ A+Y++SQ E GPLA SIVEVPH GFAFL RVGDALLMDL D HNP CVYRT+LN
Sbjct: 155 ERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYRTTLNFS 214
Query: 114 -TAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
+EE N IE+ R DVDDEG+FNVAA ALL+LSD
Sbjct: 215 GHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQLSD 251
>ref|XP_007029118.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 3 [Theobroma cacao]
gi|508717723|gb|EOY09620.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 3
[Theobroma cacao]
Length = 1254
Score = 124 bits (312), Expect = 2e-26
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLNLP 115
+ A+Y++SQ E GPLA SIVEVPH GFAFL RVGDALLMDL D HNP CVYRT+LN
Sbjct: 263 ERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYRTTLNFS 322
Query: 114 -TAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
+EE N IE+ R DVDDEG+FNVAA ALL+LSD
Sbjct: 323 GHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQLSD 359
>ref|XP_007029117.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 2, partial [Theobroma cacao]
gi|508717722|gb|EOY09619.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 2,
partial [Theobroma cacao]
Length = 1237
Score = 124 bits (312), Expect = 2e-26
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLNLP 115
+ A+Y++SQ E GPLA SIVEVPH GFAFL RVGDALLMDL D HNP CVYRT+LN
Sbjct: 175 ERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYRTTLNFS 234
Query: 114 -TAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
+EE N IE+ R DVDDEG+FNVAA ALL+LSD
Sbjct: 235 GHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQLSD 271
>ref|XP_007029116.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
protein isoform 1 [Theobroma cacao]
gi|508717721|gb|EOY09618.1| Cleavage and polyadenylation
specificity factor (CPSF) A subunit protein isoform 1
[Theobroma cacao]
Length = 1391
Score = 124 bits (312), Expect = 2e-26
Identities = 65/97 (67%), Positives = 74/97 (76%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLNLP 115
+ A+Y++SQ E GPLA SIVEVPH GFAFL RVGDALLMDL D HNP CVYRT+LN
Sbjct: 263 ERAVYVVSQYLEAGPLAHSIVEVPHSCGFAFLLRVGDALLMDLSDAHNPHCVYRTTLNFS 322
Query: 114 -TAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
+EE N IE+ R DVDDEG+FNVAA ALL+LSD
Sbjct: 323 GHTLEEQNFIEDSFRAHDVDDEGLFNVAACALLQLSD 359
>ref|XP_010464941.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Camelina sativa]
Length = 1371
Score = 122 bits (307), Expect = 7e-26
Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 1/97 (1%)
Frame = -1
Query: 294 DHAIYIISQCTEPGPLALSIVEVPHVYGFAFLFRVGDALLMDLRDPHNPCCVYRTSLNL- 118
+ ++ IIS+ EPG LA SIVEVPH GFAFLFRVGDALLMDLRDP NPCC++RTSL+L
Sbjct: 261 EESMSIISEYVEPGALAHSIVEVPHSCGFAFLFRVGDALLMDLRDPQNPCCLFRTSLDLV 320
Query: 117 PTAVEEGNSIEELSRGIDVDDEGIFNVAASALLELSD 7
P ++ E + +EE R D DDEG+FNVAA ALLEL D
Sbjct: 321 PASLVEEHFVEESCRVQDGDDEGLFNVAACALLELRD 357