BLASTX nr result

ID: Cinnamomum25_contig00036678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036678
         (347 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsic...    65   2e-08
ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulga...    62   1e-07
ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima] gi|...    62   2e-07
emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. marit...    60   7e-07

>ref|YP_009049788.1| hypothetical protein (mitochondrion) [Capsicum annuum]
           gi|667751745|gb|AIG89832.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
           gi|667752060|gb|AIG90146.1| hypothetical protein
           (mitochondrion) [Capsicum annuum]
          Length = 117

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 26/33 (78%), Positives = 29/33 (87%)
 Frame = -1

Query: 101 VEFPFQGRTTYHDTFCFVEPCFSLWFDGCTC*K 3
           ++ PFQGRTTY+DTF FVEPCF LWFDGCTC K
Sbjct: 1   MKVPFQGRTTYYDTFRFVEPCFGLWFDGCTCKK 33


>ref|NP_064047.1| orf169 gene product (mitochondrion) [Beta vulgaris subsp.
          vulgaris] gi|323435071|ref|YP_004222289.1| hypothetical
          protein BevumaM_p051 [Beta vulgaris subsp. maritima]
          gi|346683271|ref|YP_004842203.1| hypothetical protein
          BemaM_p159 [Beta macrocarpa] gi|9049347|dbj|BAA99357.1|
          orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          gi|317905724|emb|CBJ14109.1| hypothetical protein [Beta
          vulgaris subsp. maritima] gi|319439804|emb|CBJ17516.1|
          hypothetical protein [Beta vulgaris subsp. maritima]
          gi|345500189|emb|CBX25008.1| hypothetical protein [Beta
          macrocarpa] gi|384939187|emb|CBL52034.1| hypothetical
          protein (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 2  IFSTYNHQTRD*SKARQNRKYHGTSSFPEMEI 97
          IFSTYNHQTRD S+ARQNRKYHGTSSF EME+
Sbjct: 4  IFSTYNHQTRDQSRARQNRKYHGTSSFTEMEL 35


>ref|YP_009045731.1| orf148b (mitochondrion) [Batis maritima]
           gi|655168505|gb|AIC83334.1| orf148b (mitochondrion)
           [Batis maritima]
          Length = 148

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 3   FLARTTIKPETKARLDKTESIMVRRPSLKWKFNGASASN 119
           FLAR TIKPETKA LDKTESIMVRRPSLKW F+  + ++
Sbjct: 10  FLARATIKPETKAGLDKTESIMVRRPSLKWNFHAEARTS 48


>emb|CBJ23345.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 169

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +2

Query: 2  IFSTYNHQTRD*SKARQNRKYHGTSSFPEMEI 97
          I STYNHQTRD S+ARQNRKYHGTSSF EME+
Sbjct: 4  ILSTYNHQTRDQSRARQNRKYHGTSSFTEMEL 35


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