BLASTX nr result

ID: Cinnamomum25_contig00036592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036592
         (404 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010248466.1| PREDICTED: pentatricopeptide repeat-containi...   102   8e-20
ref|XP_011620733.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
gb|ERM93917.1| hypothetical protein AMTR_s00137p00065090 [Ambore...    63   9e-08
emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]    59   1e-06
ref|XP_009623736.1| PREDICTED: putative pentatricopeptide repeat...    58   2e-06
gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japo...    57   4e-06
gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indi...    57   4e-06
gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]      57   4e-06
ref|NP_001051694.1| Os03g0816600, partial [Oryza sativa Japonica...    57   4e-06
gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sat...    57   4e-06
ref|XP_011628229.1| PREDICTED: pentatricopeptide repeat-containi...    57   5e-06
gb|ERN19094.1| hypothetical protein AMTR_s00061p00127300 [Ambore...    57   5e-06
ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containi...    57   6e-06
ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06
ref|XP_010266357.1| PREDICTED: pentatricopeptide repeat-containi...    56   8e-06

>ref|XP_010248466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Nelumbo nucifera]
          Length = 589

 Score =  102 bits (255), Expect = 8e-20
 Identities = 49/83 (59%), Positives = 63/83 (75%)
 Frame = -2

Query: 250 HCHSTPQTQHFCNSYTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNL 71
           H H+  +++    SYT +L+ H  +R ++QIHARI++EGSS  SF ATHLVKSYAKAGNL
Sbjct: 31  HIHAIQESEDPSTSYTRILQCHASSREVEQIHARIIIEGSSWDSFYATHLVKSYAKAGNL 90

Query: 70  SIACQVFEPVPEKSVYLWNAMIR 2
             A  VFE VP+K+V+LWNAMIR
Sbjct: 91  HAAHLVFELVPKKTVFLWNAMIR 113


>ref|XP_011620733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06145
           [Amborella trichopoda]
          Length = 701

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = -2

Query: 232 QTQH--FCNSYT---HLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLS 68
           Q +H  FC   +   +LLR  P +  ++QIHA++V+ G S  +F ATHL+KSYAKAG + 
Sbjct: 3   QREHPFFCRKASVCYNLLRGFPPSSTVEQIHAQVVIHGLSDNAFLATHLLKSYAKAGRVC 62

Query: 67  IACQVFEPVPEKSVYLWNAMIR 2
            A  +F    +  ++L NA+IR
Sbjct: 63  DARLLFNSHSKPDIFLCNAIIR 84


>gb|ERM93917.1| hypothetical protein AMTR_s00137p00065090 [Amborella trichopoda]
          Length = 358

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
 Frame = -2

Query: 232 QTQH--FCNSYT---HLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLS 68
           Q +H  FC   +   +LLR  P +  ++QIHA++V+ G S  +F ATHL+KSYAKAG + 
Sbjct: 3   QREHPFFCRKASVCYNLLRGFPPSSTVEQIHAQVVIHGLSDNAFLATHLLKSYAKAGRVC 62

Query: 67  IACQVFEPVPEKSVYLWNAMIR 2
            A  +F    +  ++L NA+IR
Sbjct: 63  DARLLFNSHSKPDIFLCNAIIR 84


>emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
          Length = 2076

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 25/51 (49%), Positives = 36/51 (70%)
 Frame = -2

Query: 157 HARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKSVYLWNAMI 5
           HARIVV G++G  F   +L+  Y+K G+LS ACQVF+  PE+ +  WNA++
Sbjct: 107 HARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAIL 157


>ref|XP_009623736.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630 [Nicotiana tomentosiformis]
           gi|697139300|ref|XP_009623737.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At1g17630
           [Nicotiana tomentosiformis]
           gi|697139302|ref|XP_009623738.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At1g17630
           [Nicotiana tomentosiformis]
           gi|697139304|ref|XP_009623739.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At1g17630
           [Nicotiana tomentosiformis]
          Length = 726

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
 Frame = -2

Query: 244 HSTPQTQHFCNSYTHLLR---------SHPQTRPIQQIHARIVVEGSSGTSFSATHLVKS 92
           HS P   H  N+  HLL          S    + ++QIHA+ ++ GSS +SF A  L+  
Sbjct: 29  HSLPSPNHSHNTQNHLLDFLDHLLQQCSLYNLKQLKQIHAKFIITGSSNSSFIAARLISV 88

Query: 91  YAKAGNLSIACQVFEPVPEK---SVYLWNAMIR 2
           YAK G L+ A +VFE  P +   ++ LWN+++R
Sbjct: 89  YAKFGILNEAQKVFETCPTECFSNLLLWNSILR 121


>gb|EEE60175.1| hypothetical protein OsJ_13106 [Oryza sativa Japonica Group]
          Length = 628

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           ++HL R+    RP++Q+HA     G++   F+A HL+ +YA  G+L+ A ++FE +P ++
Sbjct: 47  FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 28  VYLWNAM 8
           V  WN +
Sbjct: 107 VMSWNIL 113


>gb|EEC76412.1| hypothetical protein OsI_14066 [Oryza sativa Indica Group]
          Length = 628

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           ++HL R+    RP++Q+HA     G++   F+A HL+ +YA  G+L+ A ++FE +P ++
Sbjct: 47  FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 28  VYLWNAM 8
           V  WN +
Sbjct: 107 VMSWNIL 113


>gb|AAO60036.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 704

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           ++HL R+    RP++Q+HA     G++   F+A HL+ +YA  G+L+ A ++FE +P ++
Sbjct: 113 FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 172

Query: 28  VYLWNAM 8
           V  WN +
Sbjct: 173 VMSWNIL 179


>ref|NP_001051694.1| Os03g0816600, partial [Oryza sativa Japonica Group]
           gi|113550165|dbj|BAF13608.1| Os03g0816600, partial
           [Oryza sativa Japonica Group]
          Length = 708

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           ++HL R+    RP++Q+HA     G++   F+A HL+ +YA  G+L+ A ++FE +P ++
Sbjct: 109 FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 168

Query: 28  VYLWNAM 8
           V  WN +
Sbjct: 169 VMSWNIL 175


>gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group] gi|215697380|dbj|BAG91374.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 646

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/67 (35%), Positives = 43/67 (64%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           ++HL R+    RP++Q+HA     G++   F+A HL+ +YA  G+L+ A ++FE +P ++
Sbjct: 47  FSHLFRACRALRPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIPRRN 106

Query: 28  VYLWNAM 8
           V  WN +
Sbjct: 107 VMSWNIL 113


>ref|XP_011628229.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Amborella trichopoda]
          Length = 676

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/71 (35%), Positives = 42/71 (59%)
 Frame = -2

Query: 214 NSYTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPE 35
           ++YT L+ +    + ++QIH   +  G   T F A   + + +K   L+ ACQ+F  +P+
Sbjct: 131 DAYTSLVDNSSHIKHLKQIHGHFLSLGLQKTIFFAAKFINACSKFNELNYACQIFSEIPQ 190

Query: 34  KSVYLWNAMIR 2
           +S +LWNAMIR
Sbjct: 191 RSSFLWNAMIR 201


>gb|ERN19094.1| hypothetical protein AMTR_s00061p00127300 [Amborella trichopoda]
          Length = 430

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/71 (35%), Positives = 42/71 (59%)
 Frame = -2

Query: 214 NSYTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPE 35
           ++YT L+ +    + ++QIH   +  G   T F A   + + +K   L+ ACQ+F  +P+
Sbjct: 131 DAYTSLVDNSSHIKHLKQIHGHFLSLGLQKTIFFAAKFINACSKFNELNYACQIFSEIPQ 190

Query: 34  KSVYLWNAMIR 2
           +S +LWNAMIR
Sbjct: 191 RSSFLWNAMIR 201


>ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = -2

Query: 241 STPQTQHFCNSYTHLLRSHPQTRP---IQQIHARIVVEGSSGTSFSATHLVKSYAKAGNL 71
           +T    H   S  HLL+     R     QQ HA+I+  G +  +F AT LV +YA  G L
Sbjct: 20  ATVSLAHTPQSLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGEL 79

Query: 70  SIACQVFEPVPEKSVYLWNAMI 5
           + +  VFE V  KSVYLWN++I
Sbjct: 80  ATSRFVFESVEAKSVYLWNSLI 101


>ref|XP_010246108.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Nelumbo nucifera]
          Length = 738

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/69 (36%), Positives = 43/69 (62%)
 Frame = -2

Query: 208 YTHLLRSHPQTRPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKS 29
           Y  LL +    + + QIHA+++V G   +++ AT  V + + AG +  A  +FE +PE +
Sbjct: 69  YAFLLDNLTHKKHLVQIHAQLIVAGFQNSNYLATKFVHASSNAGEIHYARSLFEEIPEPN 128

Query: 28  VYLWNAMIR 2
           V+LWNA++R
Sbjct: 129 VFLWNAIVR 137


>ref|XP_010266357.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Nelumbo nucifera]
          Length = 646

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 28/57 (49%), Positives = 38/57 (66%)
 Frame = -2

Query: 175 RPIQQIHARIVVEGSSGTSFSATHLVKSYAKAGNLSIACQVFEPVPEKSVYLWNAMI 5
           R +Q+IHA IV  G       AT LV +YAK G +S AC+VF+ +PE++V  W+AMI
Sbjct: 188 RRVQEIHAHIVRHGLESHVHVATTLVDAYAKFGCVSYACRVFDEMPERNVVSWSAMI 244


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