BLASTX nr result

ID: Cinnamomum25_contig00036524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036524
         (431 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010263384.1| PREDICTED: putative pentatricopeptide repeat...    82   1e-13
ref|XP_004301025.1| PREDICTED: putative pentatricopeptide repeat...    80   4e-13
ref|XP_009333913.1| PREDICTED: putative pentatricopeptide repeat...    70   5e-10
ref|XP_008360794.1| PREDICTED: putative pentatricopeptide repeat...    67   5e-09
ref|XP_008239360.1| PREDICTED: putative pentatricopeptide repeat...    66   8e-09
ref|XP_008374384.1| PREDICTED: putative pentatricopeptide repeat...    65   1e-08

>ref|XP_010263384.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Nelumbo nucifera]
           gi|720023612|ref|XP_010263385.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein At5g37570
           [Nelumbo nucifera]
          Length = 564

 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
 Frame = +2

Query: 131 KHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASLSLPL 310
           K+H NNK D AA LLK  C+S  L  LKQIHA ++R  LHQNNSLA T+VSLY SLSLP 
Sbjct: 7   KNHKNNKVDRAASLLKT-CTS--LSQLKQIHAHMIRTCLHQNNSLACTIVSLYTSLSLPH 63

Query: 311 HAXXXXXXXXXXXXXXXNRTVRALSRNP----HSLLLYLQMTRS 430
           +                N T++A S+ P    HS+ LYLQM ++
Sbjct: 64  YIYRVFSSVSRPSLSLFNHTIKAFSKVPSLCIHSVHLYLQMIQN 107


>ref|XP_004301025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Fragaria vesca subsp. vesca]
          Length = 568

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 53/105 (50%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
 Frame = +2

Query: 128 SKHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASL-SL 304
           +++H NNKAD AA LLK  CSS  L  LKQIHA ILR NLH N SL+STL+SLYASL S 
Sbjct: 8   TRNHPNNKADVAAALLKP-CSS--LHHLKQIHAHILRSNLHPNASLSSTLISLYASLSSS 64

Query: 305 PLHAXXXXXXXXXXXXXXXNRTVRALSRNP----HSLLLYLQMTR 427
           P H                N  +RA S+ P    H+  LY QM R
Sbjct: 65  PNHTHRVFTSFPNPNLSLFNHAIRAFSKTPSLSSHATALYRQMVR 109


>ref|XP_009333913.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Pyrus x bretschneideri]
          Length = 580

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 45/88 (51%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 128 SKHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASLSL- 304
           +K+H NNKAD AA LLK  C+S C   LKQIHA   R NLHQN SLASTL+S YASLS  
Sbjct: 7   AKNHPNNKADGAASLLKS-CTSLC--HLKQIHAHTFRSNLHQNASLASTLISFYASLSAS 63

Query: 305 PLHAXXXXXXXXXXXXXXXNRTVRALSR 388
           P +                N  VRA S+
Sbjct: 64  PRYTHLVFTSFPKPNLSLFNHAVRAFSK 91


>ref|XP_008360794.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Malus domestica]
          Length = 567

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 45/88 (51%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 128 SKHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASL-SL 304
           +K+H NNKAD AA LLK  C+S  L  LKQIHA I R NLH N SL STL+SLYASL S 
Sbjct: 7   AKNHXNNKADGAASLLKS-CTS--LRHLKQIHAHIXRSNLHGNASLVSTLISLYASLSSS 63

Query: 305 PLHAXXXXXXXXXXXXXXXNRTVRALSR 388
           P +                N  VRA S+
Sbjct: 64  PRYTHLVFTSFPNPNLSLFNHAVRAFSK 91


>ref|XP_008239360.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Prunus mume]
          Length = 567

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 44/88 (50%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 128 SKHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASL-SL 304
           +K+H NNKAD AA LLK  C+S  L  LKQIHA I+R  LH+N SLASTL+SLYASL S 
Sbjct: 7   TKNHPNNKADGAASLLKA-CAS--LRHLKQIHAHIVRSILHRNASLASTLISLYASLSSS 63

Query: 305 PLHAXXXXXXXXXXXXXXXNRTVRALSR 388
           P +                N  +RA S+
Sbjct: 64  PRYTHLVFTSFANPNLSLFNHAIRAFSK 91


>ref|XP_008374384.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Malus domestica]
          Length = 163

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 37/57 (64%), Positives = 43/57 (75%)
 Frame = +2

Query: 128 SKHHTNNKADTAAFLLKQQCSSPCLPSLKQIHAQILRFNLHQNNSLASTLVSLYASL 298
           +K+H N KAD AA LLK  C+S C   LKQIHA I+R NLH+N SLASTL+S YASL
Sbjct: 7   AKNHPNKKADGAASLLKS-CASLC--HLKQIHAHIVRSNLHRNASLASTLISFYASL 60


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