BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036460
         (403 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010100609.1| DNA-directed RNA polymerase III subunit RPC2...   137   2e-30
ref|XP_011625560.1| PREDICTED: DNA-directed RNA polymerase III s...   135   8e-30
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...   133   4e-29
ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III s...   133   4e-29
ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III s...   133   4e-29
gb|KFK41869.1| hypothetical protein AALP_AA2G181600 [Arabis alpina]   132   7e-29
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...   132   9e-29
ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theob...   132   9e-29
ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob...   132   9e-29
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob...   132   9e-29
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...   132   9e-29
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob...   132   9e-29
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...   132   9e-29
ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III s...   132   1e-28
ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III s...   132   1e-28
emb|CDX82580.1| BnaC07g02860D [Brassica napus]                        132   1e-28
ref|XP_009101620.1| PREDICTED: DNA-directed RNA polymerase III s...   131   2e-28
emb|CDY39413.1| BnaAnng05440D [Brassica napus]                        131   2e-28
gb|KHF98728.1| DNA-directed RNA polymerase III subunit RPC2 [Gos...   131   2e-28
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...   130   3e-28

>ref|XP_010100609.1| DNA-directed RNA polymerase III subunit RPC2 [Morus notabilis]
           gi|587894730|gb|EXB83246.1| DNA-directed RNA polymerase
           III subunit RPC2 [Morus notabilis]
          Length = 424

 Score =  137 bits (346), Expect = 2e-30
 Identities = 73/144 (50%), Positives = 99/144 (68%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403 VMNKSSLDRGFGRCIVMKKLSTVKKK-DDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
           VMNK+SLDRGFGRCIVMK+LS + +K D+   +R +     G D  + Q+LD+DG+A+PG
Sbjct: 56  VMNKASLDRGFGRCIVMKRLSAINQKYDNNTQDRIIRPDREGSDAARMQVLDDDGLAAPG 115

Query: 229 EIVRPRYILVDKNS--------RTALQEREYEYTPLKYNGPEGETAVVDKVALFTDDSGN 74
           EI+RP  I ++K S        RT L + +Y+     + GPEGE+ VVDKVAL++D + N
Sbjct: 116 EIIRPNDIYINKQSPKVTKGPMRTGLTDSDYKPACQTFKGPEGESCVVDKVALYSDKNNN 175

Query: 73  LTIKCIICDTRTPQVGDKFSTRHG 2
           L IK +I  TR P+VGDKFS+RHG
Sbjct: 176 LCIKFLIRHTRRPEVGDKFSSRHG 199


>ref|XP_011625560.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Amborella
            trichopoda]
          Length = 1143

 Score =  135 bits (341), Expect = 8e-30
 Identities = 77/150 (51%), Positives = 98/150 (65%), Gaps = 16/150 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIE-RQVSTGEGG--LDILKQILDED 248
            VMNK+SLDRGFGRCIVMKK + + +K      DRI+  R + TG G   LD   QILD D
Sbjct: 754  VMNKASLDRGFGRCIVMKKTTVLSQKYSNKTSDRIVRPRMLPTGNGDFVLDPRFQILDTD 813

Query: 247  GIASPGEIVRPRYILVDKNS--------RTALQEREYEYTPLKYNGPEGETAVVDKVALF 92
            GIA PGEI+ P  I V+K S           L + +Y+ TP+ Y GP+GETA+VDKV L 
Sbjct: 814  GIACPGEIIGPNDIYVNKQSPVNTTATPNRELSDSQYKNTPVTYKGPKGETAIVDKVLLM 873

Query: 91   TDDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            +D++ N+ IK +   TR P+VGDKFS+RHG
Sbjct: 874  SDNNENICIKFLFRHTRRPEVGDKFSSRHG 903


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
            raimondii] gi|763808128|gb|KJB75030.1| hypothetical
            protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score =  133 bits (335), Expect = 4e-29
 Identities = 79/149 (53%), Positives = 99/149 (66%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMKK S V +K      DRI+  Q  TG G   +L  ILD+DGIA
Sbjct: 772  VMNKSSLDRGFGRCIVMKKSSNVIQKYENGATDRILRPQ-RTGPGSEKML--ILDDDGIA 828

Query: 238  SPGEIVRPRYILVDKN----------SRTALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            SPGEI+RP  IL++K           S  +L +  Y+     Y GPEGE+ V+D+V+L T
Sbjct: 829  SPGEIIRPNDILLNKEVPIHTRGTRVSSDSLPDSAYKPVRQSYKGPEGESCVMDRVSLST 888

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D +GNL+IK +I  TR P++GDKFS+RHG
Sbjct: 889  DRNGNLSIKFLIRHTRRPELGDKFSSRHG 917


>ref|XP_010242622.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
            [Nelumbo nucifera]
          Length = 1140

 Score =  133 bits (335), Expect = 4e-29
 Identities = 77/149 (51%), Positives = 94/149 (63%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMKKLS + ++      DRII  Q           ++ILD DGIA
Sbjct: 757  VMNKSSLDRGFGRCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNA-----EKILDADGIA 811

Query: 238  SPGEIVRPRYILVDKN----------SRTALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K           S T L +  Y+ T   Y GP+GETAVVD+VAL +
Sbjct: 812  APGEIIRPHDIYINKETPVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCS 871

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D   NL IK +I  TR P+VGDKFS+RHG
Sbjct: 872  DKDNNLCIKFLIRHTRRPEVGDKFSSRHG 900


>ref|XP_010242621.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
            [Nelumbo nucifera]
          Length = 1142

 Score =  133 bits (335), Expect = 4e-29
 Identities = 77/149 (51%), Positives = 94/149 (63%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMKKLS + ++      DRII  Q           ++ILD DGIA
Sbjct: 759  VMNKSSLDRGFGRCIVMKKLSAINQRYPNDTSDRIIRPQKVRSNA-----EKILDADGIA 813

Query: 238  SPGEIVRPRYILVDKN----------SRTALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K           S T L +  Y+ T   Y GP+GETAVVD+VAL +
Sbjct: 814  APGEIIRPHDIYINKETPVNTRDKFTSPTGLPDSAYKSTRQTYKGPQGETAVVDRVALCS 873

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D   NL IK +I  TR P+VGDKFS+RHG
Sbjct: 874  DKDNNLCIKFLIRHTRRPEVGDKFSSRHG 902


>gb|KFK41869.1| hypothetical protein AALP_AA2G181600 [Arabis alpina]
          Length = 1149

 Score =  132 bits (333), Expect = 7e-29
 Identities = 76/144 (52%), Positives = 100/144 (69%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKL-STVKKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNKSSLDRGFGRCIVMKKL +T +K ++  ++R +     G D  K QILD+DG ASPG
Sbjct: 766  VMNKSSLDRGFGRCIVMKKLVATCQKYENNTVDRILKPERTGPDAEKMQILDDDGFASPG 825

Query: 229  EIVRPRYILVDK----NSR----TALQEREYEYTPLKYNGPEGETAVVDKVALFTDDSGN 74
            EI+RP+ I ++K    N+R    + L + +Y      + GPEGET VVD+VAL +D +G+
Sbjct: 826  EIIRPKDIYINKEVPMNTRDKMPSPLPDSQYRSAREYFKGPEGETQVVDRVALCSDKNGH 885

Query: 73   LTIKCIICDTRTPQVGDKFSTRHG 2
            L IK II  TR P++GDKFS+RHG
Sbjct: 886  LCIKYIIRHTRRPELGDKFSSRHG 909


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 697  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 753

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 754  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 813

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 814  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 842


>ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
            gi|508727717|gb|EOY19614.1| DNA-directed RNA polymerase
            isoform 6 [Theobroma cacao]
          Length = 1034

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 796  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 852

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 853  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 912

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 913  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 941


>ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
            gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase
            isoform 5 [Theobroma cacao]
          Length = 1006

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 768  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 824

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 825  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 884

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 885  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 913


>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
            gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
            isoform 4 [Theobroma cacao]
          Length = 1034

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 773  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 829

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 830  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 889

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 890  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 918


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 768  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 824

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 825  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 884

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 885  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 913


>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
            gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
            isoform 2 [Theobroma cacao]
          Length = 1011

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 773  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 829

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 830  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 889

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 890  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 918


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score =  132 bits (332), Expect = 9e-29
 Identities = 78/149 (52%), Positives = 96/149 (64%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMK+ S V +K      DRI+  Q  TG G   +  QILD+DGIA
Sbjct: 773  VMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQ-RTGPGSERM--QILDDDGIA 829

Query: 238  SPGEIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            +PGEI+RP  I ++K S            +L +  Y      Y GPEGE+ VVD+VAL T
Sbjct: 830  TPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCT 889

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D + NL+IK +I  TR P+VGDKFS+RHG
Sbjct: 890  DRNSNLSIKFLIRHTRRPEVGDKFSSRHG 918


>ref|XP_009758465.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris] gi|698523320|ref|XP_009758466.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            sylvestris]
          Length = 1155

 Score =  132 bits (331), Expect = 1e-28
 Identities = 75/146 (51%), Positives = 96/146 (65%), Gaps = 12/146 (8%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLS-TVKKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNKSSLDRGFGRCIVMKK S T  K ++   +R +     G +  + QILDEDG+ASPG
Sbjct: 770  VMNKSSLDRGFGRCIVMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPG 829

Query: 229  EIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFTDDS 80
            EI+RP  I ++K S T          +L +  Y+ +   Y GPEGET VVD+VAL +D +
Sbjct: 830  EIIRPHDIYINKESPTVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKN 889

Query: 79   GNLTIKCIICDTRTPQVGDKFSTRHG 2
             NL IK +I  TR P++GDKFS+RHG
Sbjct: 890  NNLCIKFMIRHTRRPEIGDKFSSRHG 915


>ref|XP_009604369.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Nicotiana
            tomentosiformis]
          Length = 1155

 Score =  132 bits (331), Expect = 1e-28
 Identities = 75/146 (51%), Positives = 96/146 (65%), Gaps = 12/146 (8%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLS-TVKKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNKSSLDRGFGRCIVMKK S T  K ++   +R +     G +  + QILDEDG+ASPG
Sbjct: 770  VMNKSSLDRGFGRCIVMKKYSATCLKYENNTSDRIIKPQRQGYEAERMQILDEDGLASPG 829

Query: 229  EIVRPRYILVDKNSRT----------ALQEREYEYTPLKYNGPEGETAVVDKVALFTDDS 80
            EI+RP  I ++K S T          +L +  Y+ +   Y GPEGET VVD+VAL +D +
Sbjct: 830  EIIRPHDIYINKESPTVTRTPVSSPMSLPDSAYKPSRQTYKGPEGETPVVDRVALHSDKN 889

Query: 79   GNLTIKCIICDTRTPQVGDKFSTRHG 2
             NL IK +I  TR P++GDKFS+RHG
Sbjct: 890  NNLCIKFMIRHTRRPEIGDKFSSRHG 915


>emb|CDX82580.1| BnaC07g02860D [Brassica napus]
          Length = 1173

 Score =  132 bits (331), Expect = 1e-28
 Identities = 75/144 (52%), Positives = 98/144 (68%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKL-STVKKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNK+SLDRGFGRCIVMKKL +  +K  +  ++R +     G D  K QILD+DGIASPG
Sbjct: 790  VMNKASLDRGFGRCIVMKKLVAACQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIASPG 849

Query: 229  EIVRP------RYILVDKNSRTALQEREYEYTPLK--YNGPEGETAVVDKVALFTDDSGN 74
            EI+RP      + + VD  +    Q+ + +Y P +  + GPEGET VVD+VAL +D +GN
Sbjct: 850  EIIRPNDVYINKQVPVDTRNNITSQQSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGN 909

Query: 73   LTIKCIICDTRTPQVGDKFSTRHG 2
            L IK II  TR P++GDKFS+RHG
Sbjct: 910  LCIKYIIRHTRRPELGDKFSSRHG 933


>ref|XP_009101620.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Brassica
            rapa] gi|685326458|ref|XP_009101622.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC2 [Brassica
            rapa]
          Length = 1151

 Score =  131 bits (330), Expect = 2e-28
 Identities = 74/144 (51%), Positives = 97/144 (67%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTV-KKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNK+SLDRGF RCIVMKK   + +K  +  ++R +     G D  K QILD+DGIASPG
Sbjct: 768  VMNKASLDRGFVRCIVMKKFVAICQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIASPG 827

Query: 229  EIVRP------RYILVDKNSRTALQEREYEYTPLK--YNGPEGETAVVDKVALFTDDSGN 74
            EI+RP      + + VD  +    Q+ + +Y P +  + GPEGET VVD+VAL +D +GN
Sbjct: 828  EIIRPNDVYINKQVPVDTRNNITSQQSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGN 887

Query: 73   LTIKCIICDTRTPQVGDKFSTRHG 2
            L IKCII  TR P++GDKFS+RHG
Sbjct: 888  LCIKCIIRHTRRPELGDKFSSRHG 911


>emb|CDY39413.1| BnaAnng05440D [Brassica napus]
          Length = 1166

 Score =  131 bits (330), Expect = 2e-28
 Identities = 74/144 (51%), Positives = 97/144 (67%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTV-KKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNK+SLDRGF RCIVMKK   + +K  +  ++R +     G D  K QILD+DGIASPG
Sbjct: 783  VMNKASLDRGFVRCIVMKKFVAICQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIASPG 842

Query: 229  EIVRP------RYILVDKNSRTALQEREYEYTPLK--YNGPEGETAVVDKVALFTDDSGN 74
            EI+RP      + + VD  +    Q+ + +Y P +  + GPEGET VVD+VAL +D +GN
Sbjct: 843  EIIRPNDVYINKQVPVDTRNNITSQQSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGN 902

Query: 73   LTIKCIICDTRTPQVGDKFSTRHG 2
            L IKCII  TR P++GDKFS+RHG
Sbjct: 903  LCIKCIIRHTRRPELGDKFSSRHG 926


>gb|KHF98728.1| DNA-directed RNA polymerase III subunit RPC2 [Gossypium arboreum]
          Length = 1170

 Score =  131 bits (329), Expect = 2e-28
 Identities = 79/149 (53%), Positives = 100/149 (67%), Gaps = 15/149 (10%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKLSTVKKK-----DDRIIERQVSTGEGGLDILKQILDEDGIA 239
            VMNKSSLDRGFGRCIVMKK S V +K      DRI+  Q  TG G L+ + QILD+DGIA
Sbjct: 760  VMNKSSLDRGFGRCIVMKKSSNVIQKYENGATDRILRPQ-RTGPG-LEKM-QILDDDGIA 816

Query: 238  SPGEIVRPRYILVDKN----------SRTALQEREYEYTPLKYNGPEGETAVVDKVALFT 89
            SPGEI+RP   L++K           S  +L +  Y+     Y GPEGE+ VVD+V+L T
Sbjct: 817  SPGEIIRPNDSLLNKEVPIHTRGTRVSSDSLPDSAYKPARQSYKGPEGESCVVDRVSLST 876

Query: 88   DDSGNLTIKCIICDTRTPQVGDKFSTRHG 2
            D +GNL++K +I  TR P++GDKFS+RHG
Sbjct: 877  DRNGNLSVKFLIRHTRRPELGDKFSSRHG 905


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score =  130 bits (327), Expect = 3e-28
 Identities = 73/144 (50%), Positives = 97/144 (67%), Gaps = 10/144 (6%)
 Frame = -1

Query: 403  VMNKSSLDRGFGRCIVMKKL-STVKKKDDRIIERQVSTGEGGLDILK-QILDEDGIASPG 230
            VMNK+SLDRGFGRCIVMKK+ +T +K  +  ++R +     G D  K QILD+DGIA+PG
Sbjct: 780  VMNKASLDRGFGRCIVMKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDDGIAAPG 839

Query: 229  EIVRPRYILVDK--------NSRTALQEREYEYTPLKYNGPEGETAVVDKVALFTDDSGN 74
            EI+RP  + ++K        N  + L + +Y      + GPEGET VVD+VAL +D +GN
Sbjct: 840  EIIRPNDVYINKQIPVDTRDNITSPLSDSQYRPAREYFKGPEGETQVVDRVALCSDKNGN 899

Query: 73   LTIKCIICDTRTPQVGDKFSTRHG 2
            L IK II  TR P++GDKFS+RHG
Sbjct: 900  LCIKYIIRHTRRPELGDKFSSRHG 923