BLASTX nr result

ID: Cinnamomum25_contig00036033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036033
         (273 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010241799.1| PREDICTED: pentatricopeptide repeat-containi...    90   7e-16
gb|ERM99201.1| hypothetical protein AMTR_s00092p00099090 [Ambore...    60   4e-07

>ref|XP_010241799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Nelumbo nucifera]
          Length = 619

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 43/78 (55%), Positives = 56/78 (71%)
 Frame = +2

Query: 38  FIIAHLILALSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQKKTISIYLLQM 217
           F+I +LI  LSQRF + +Y+ SI++H  NPNTFLFNAM+Q+LS +   Q   I +Y+LQM
Sbjct: 43  FLITNLITVLSQRFRAINYSFSIFTHTHNPNTFLFNAMIQALSETPGFQSNAIQLYILQM 102

Query: 218 RNPQCPSSRPNCFTFPPL 271
           R    P+ RPN FTFPPL
Sbjct: 103 RYGTEPTRRPNRFTFPPL 120


>gb|ERM99201.1| hypothetical protein AMTR_s00092p00099090 [Amborella trichopoda]
          Length = 306

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
 Frame = +2

Query: 56  ILALSQRFSSFDYALSIYSHFPNPNTFLFNAMLQSLSLSTQHQK-----KTISIYLLQMR 220
           +++LS R +   Y+LS+++HFPNP T+L N MLQ+LS +  H +     K+ S+Y     
Sbjct: 63  LISLSSRLTRIAYSLSLFTHFPNPTTYLSNTMLQALSDNGLHARAFSLYKSFSLY----- 117

Query: 221 NPQCPSSRPNCFTFPPL 271
                SS PN FTFPPL
Sbjct: 118 ----HSSPPNRFTFPPL 130


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