BLASTX nr result

ID: Cinnamomum25_contig00036008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00036008
         (251 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71225.1| hypothetical protein VITISV_006367 [Vitis vinifera]    45   1e-07
ref|XP_012086397.1| PREDICTED: uncharacterized protein LOC105645...    44   8e-07

>emb|CAN71225.1| hypothetical protein VITISV_006367 [Vitis vinifera]
          Length = 998

 Score = 45.4 bits (106), Expect(3) = 1e-07
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = +2

Query: 122 TFAPIAKMTMVQIPLAIVGSQTWPLFQMDVKKGF 223
           TFAP+AKMT V+  L IV SQ+W L QMDVK  F
Sbjct: 648 TFAPVAKMTTVRTILXIVASQSWQLHQMDVKNVF 681



 Score = 30.0 bits (66), Expect(3) = 1e-07
 Identities = 13/24 (54%), Positives = 19/24 (79%)
 Frame = +1

Query: 43  TLNR*KAHLVALDNCQEYGVDYDD 114
           +L+R KA L+AL N Q+Y VDY++
Sbjct: 624 SLDRYKARLIALGNKQKYXVDYEE 647



 Score = 25.8 bits (55), Expect(3) = 1e-07
 Identities = 10/13 (76%), Positives = 12/13 (92%)
 Frame = +3

Query: 210 LKKVFLHGDLQEK 248
           +K VFLHGDLQE+
Sbjct: 677 VKNVFLHGDLQEE 689


>ref|XP_012086397.1| PREDICTED: uncharacterized protein LOC105645407 [Jatropha curcas]
          Length = 359

 Score = 44.3 bits (103), Expect(3) = 8e-07
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = +2

Query: 122 TFAPIAKMTMVQIPLAIVGSQTWPLFQMDVKKGF 223
           TFAP+A MT V+  +A+  SQ WPL QMDVK  F
Sbjct: 84  TFAPVAHMTTVRTIIAVAASQGWPLHQMDVKNVF 117



 Score = 30.4 bits (67), Expect(3) = 8e-07
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +1

Query: 58  KAHLVALDNCQEYGVDYDD 114
           KA LVAL N Q+YGVDY++
Sbjct: 65  KARLVALGNKQKYGVDYEE 83



 Score = 23.9 bits (50), Expect(3) = 8e-07
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 210 LKKVFLHGDLQE 245
           +K VFLHGDL+E
Sbjct: 113 VKNVFLHGDLKE 124


Top