BLASTX nr result

ID: Cinnamomum25_contig00035298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00035298
         (337 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADO60985.1| cycling DOF factor-like 1 [Helianthus annuus]           57   4e-06
gb|ADO60984.1| cycling DOF factor-like 1 [Helianthus annuus]           57   4e-06
ref|XP_009383868.1| PREDICTED: cyclic dof factor 3-like [Musa ac...    56   8e-06

>gb|ADO60985.1| cycling DOF factor-like 1 [Helianthus annuus]
          Length = 445

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 245 DPAIKLFGRTIPVPTHGAGEGNGTEDEGPSPDGNNNSKEEEEAKDLSNETTEDKEKH-EA 69
           DPAIKLFG+TI +P     +   TED  PS D +++ K + + K   +E   DKE+    
Sbjct: 3   DPAIKLFGKTIQLPDDADVDAVNTEDPPPS-DDDDDCKSDGDCKGQPDEKPVDKEEEITH 61

Query: 68  IQISEDPAEPGTSSGINESP 9
             ISED  EP  SS +NE+P
Sbjct: 62  SSISEDVTEPNASSTLNENP 81


>gb|ADO60984.1| cycling DOF factor-like 1 [Helianthus annuus]
          Length = 445

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
 Frame = -3

Query: 245 DPAIKLFGRTIPVPTHGAGEGNGTEDEGPSPDGNNNSKEEEEAKDLSNETTEDKEKH-EA 69
           DPAIKLFG+TI +P     +   TED  PS D +++ K + + K   +E   DKE+    
Sbjct: 3   DPAIKLFGKTIQLPDDADVDAVNTEDPPPS-DDDDDCKSDGDCKGQPDEKPVDKEEEITH 61

Query: 68  IQISEDPAEPGTSSGINESP 9
             ISED  EP  SS +NE+P
Sbjct: 62  SSISEDVTEPNASSTLNENP 81


>ref|XP_009383868.1| PREDICTED: cyclic dof factor 3-like [Musa acuminata subsp.
           malaccensis]
          Length = 535

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 36/86 (41%), Positives = 48/86 (55%)
 Frame = -3

Query: 275 GSADKMSENRDPAIKLFGRTIPVPTHGAGEGNGTEDEGPSPDGNNNSKEEEEAKDLSNET 96
           GSA  MS+ RDPAIKLFG TIP       +G GT +    P G ++S  E + KD   E 
Sbjct: 34  GSAHVMSQARDPAIKLFGLTIP-----PQDGQGTAE----PPGESSSPSERDEKDTCTEV 84

Query: 95  TEDKEKHEAIQISEDPAEPGTSSGIN 18
            E + +  A ++  D  +P TSSG+N
Sbjct: 85  RESEVETSASEM-VDLQKPSTSSGLN 109


Top