BLASTX nr result
ID: Cinnamomum25_contig00034851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00034851
(343 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 118 2e-24
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 118 2e-24
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 114 2e-23
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 110 4e-22
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 110 5e-22
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g... 110 5e-22
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 109 6e-22
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 109 6e-22
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 109 8e-22
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 108 2e-21
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 108 2e-21
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707... 107 3e-21
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 107 3e-21
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 106 5e-21
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 106 5e-21
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group] 106 5e-21
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 106 7e-21
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 105 9e-21
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 105 9e-21
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group] 105 9e-21
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 118 bits (295), Expect = 2e-24
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
+ +RARCM + AGLSK+FWA+AV A Y +NR P T K +E+WSG P++YS L IF
Sbjct: 702 LVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIF 761
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G PAYA V KL+ +KCI +GYA+GVKGY+L CT+
Sbjct: 762 GCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTE 799
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 118 bits (295), Expect = 2e-24
Identities = 54/98 (55%), Positives = 70/98 (71%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
+ +RARCM + AGLSK+FWA+AV A Y +NR P T K +E+WSG P++YS L IF
Sbjct: 915 LVQRARCMRIDAGLSKKFWAEAVNTAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIF 974
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G PAYA V KL+ +KCI +GYA+GVKGY+L CT+
Sbjct: 975 GCPAYAHVSDGKLEPRAMKCIFLGYATGVKGYRLWCTE 1012
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 114 bits (286), Expect = 2e-23
Identities = 55/98 (56%), Positives = 67/98 (68%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P K E+WSG+PT+YS+L +F
Sbjct: 575 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVF 634
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GYASGVKGYKL C +
Sbjct: 635 GCTAYAHVDNGKLEPRAIKCIFLGYASGVKGYKLWCPE 672
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 110 bits (275), Expect = 4e-22
Identities = 53/98 (54%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML A L K+FWA+AV ACY INR P K E+WSG+P +YS+L +F
Sbjct: 512 IISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVF 571
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ V+KCI +GY SGVKGYKL C +
Sbjct: 572 GCTAYAHVDNGKLEPRVIKCIFLGYLSGVKGYKLWCPE 609
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 110 bits (274), Expect = 5e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARC+L AGL K+FWA+AV ACY INR P K E+WSG+P +YS+L +F
Sbjct: 810 IISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVF 869
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 870 GCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 907
>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
Japonica Group]
Length = 1601
Score = 110 bits (274), Expect = 5e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARC+L AGL K+FWA+AV ACY INR P K E+WSG+P +YS+L +F
Sbjct: 603 IISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVF 662
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 663 GCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 700
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 109 bits (273), Expect = 6e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P K ++WSG+P +YS+L +F
Sbjct: 420 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVF 479
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 480 GCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPE 517
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 109 bits (273), Expect = 6e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P K ++WSG+P +YS+L +F
Sbjct: 588 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPGYAIDKKTPIKVWSGSPANYSDLKVF 647
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 648 GCTAYAHVDNGKLEPRTIKCIFLGYPSGVKGYKLWCPE 685
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gi|20087076|gb|AAM10749.1|AC112514_2 Putative
retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 109 bits (272), Expect = 8e-22
Identities = 52/98 (53%), Positives = 65/98 (66%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P K ++WSG+P +YS+L +F
Sbjct: 564 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVF 623
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 624 GCIAYAHVDNSKLEPRAIKCIFLGYPSGVKGYKLWCPE 661
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 108 bits (269), Expect = 2e-21
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML A L K+FWA+AV CY INR P + K E+WSG+P +YS+L +F
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVF 697
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 698 GCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 735
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 108 bits (269), Expect = 2e-21
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML A L K+FWA+AV CY INR P + K E+WSG+P +YS+L +F
Sbjct: 638 IISKARCMLSNADLPKQFWAEAVSTTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVF 697
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 698 GCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 735
>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
Length = 1773
Score = 107 bits (267), Expect = 3e-21
Identities = 51/98 (52%), Positives = 62/98 (63%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL + FWA+A ACY INR P K EMWSG+P +YS+L +F
Sbjct: 542 IISKARCMLSNAGLPRRFWAEAASTACYLINRSPSYAIDKKTPIEMWSGSPANYSDLKVF 601
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVK YKL C +
Sbjct: 602 GCTAYAHVDNGKLEPRAIKCIFLGYPSGVKAYKLWCPE 639
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 107 bits (267), Expect = 3e-21
Identities = 52/98 (53%), Positives = 66/98 (67%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P + + K E+WSG+P +YS+L +F
Sbjct: 603 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSP-SYANKKTPIEVWSGSPANYSDLKVF 661
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY S VKGYKL C +
Sbjct: 662 GCTAYAHVDNGKLEPRAIKCIFLGYPSSVKGYKLWCPE 699
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 106 bits (265), Expect = 5e-21
Identities = 51/98 (52%), Positives = 64/98 (65%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I ++RCML GL K+FWA+AV ACY INR P K E+WSG+P +YS+L +F
Sbjct: 638 IISKSRCMLPYVGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVF 697
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 698 GCIAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 735
>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
Length = 944
Score = 106 bits (265), Expect = 5e-21
Identities = 51/98 (52%), Positives = 63/98 (64%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA AV CY INR P K ++WSG P +YS+L +F
Sbjct: 431 IISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPANYSDLRVF 490
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY+SGVKGYKL C +
Sbjct: 491 GCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPE 528
>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
Length = 944
Score = 106 bits (265), Expect = 5e-21
Identities = 51/98 (52%), Positives = 63/98 (64%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA AV CY INR P K ++WSG P +YS+L +F
Sbjct: 431 IISKARCMLSNAGLPKQFWAAAVSTTCYLINRSPSYAIDKKTPIKVWSGFPANYSDLRVF 490
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
G AYA V KL+ +KCI +GY+SGVKGYKL C +
Sbjct: 491 GCTAYAHVDNGKLEPRAIKCIFLGYSSGVKGYKLWCPE 528
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 106 bits (264), Expect = 7e-21
Identities = 50/94 (53%), Positives = 59/94 (62%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
+ ERARCML AGL + FWA+AV ACY INR PHT CK EMWSG DYSNL F
Sbjct: 581 LLERARCMLSNAGLDRRFWAEAVSTACYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAF 640
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL 283
G AY V KL+ K + +GY GVKG+++
Sbjct: 641 GCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRI 674
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 105 bits (263), Expect = 9e-21
Identities = 51/94 (54%), Positives = 59/94 (62%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I RARCML A ++K FWA+A ACY INR P K E+WSG P DYS L +F
Sbjct: 595 IISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVF 654
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL 283
G AYA V KL+ VKC+ +GY SGVKGYKL
Sbjct: 655 GCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKL 688
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 105 bits (263), Expect = 9e-21
Identities = 51/94 (54%), Positives = 59/94 (62%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I RARCML A ++K FWA+A ACY INR P K E+WSG P DYS L +F
Sbjct: 595 IISRARCMLSHARMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVF 654
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL 283
G AYA V KL+ VKC+ +GY SGVKGYKL
Sbjct: 655 GCTAYAHVDNGKLEPRAVKCLFLGYGSGVKGYKL 688
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa Indica Group]
Length = 1009
Score = 105 bits (263), Expect = 9e-21
Identities = 51/98 (52%), Positives = 62/98 (63%)
Frame = +2
Query: 2 IFERARCMLLTAGLSKEFWAKAVYAACYFINRFPHTRSGCKILEEMWSGNPTDYSNLSIF 181
I +ARCML AGL K+FWA+AV ACY INR P K E+WS +P YS+L +F
Sbjct: 424 IISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSSSPAKYSDLRVF 483
Query: 182 GYPAYARVKTDKLKTMVVKCILMGYASGVKGYKL*CTD 295
AYA V KL+ +KCI +GY SGVKGYKL C +
Sbjct: 484 SCTAYAHVDNGKLEPRAIKCIFLGYPSGVKGYKLWCPE 521