BLASTX nr result

ID: Cinnamomum25_contig00034576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00034576
         (218 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29241.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]    70   4e-10
ref|XP_011623647.1| PREDICTED: pentatricopeptide repeat-containi...    70   7e-10
ref|XP_010918387.1| PREDICTED: pentatricopeptide repeat-containi...    66   1e-08
ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containi...    65   2e-08
ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein...    64   5e-08
ref|XP_003592711.1| Pentatricopeptide repeat-containing protein ...    64   5e-08
ref|XP_010243893.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_010243892.1| PREDICTED: pentatricopeptide repeat-containi...    63   7e-08
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    63   7e-08
ref|XP_008803539.1| PREDICTED: pentatricopeptide repeat-containi...    63   9e-08
gb|ERN09485.1| hypothetical protein AMTR_s00029p00110030 [Ambore...    63   9e-08
ref|XP_010550274.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_008229311.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07
emb|CDP19158.1| unnamed protein product [Coffea canephora]             61   3e-07
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               61   3e-07
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    61   3e-07

>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP +   LL FSA+SD + LDYA +IFRS++ P  F++NTL R+LS SN P  ++L+F+E
Sbjct: 42  DPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIE 101

Query: 25  MLH-CGIAP 2
           M+  C + P
Sbjct: 102 MVEDCSVEP 110


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           [Vitis vinifera]
          Length = 631

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP +   LL FSA+SD + LDYA +IFRS++ P  F++NTL R+LS SN P  ++L+F+E
Sbjct: 42  DPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIE 101

Query: 25  MLH-CGIAP 2
           M+  C + P
Sbjct: 102 MVEDCSVEP 110


>emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
          Length = 613

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP +   LL FSA+SD + LDYA +IFRS++ P  F++NTL R+LS SN P  ++L+F+E
Sbjct: 19  DPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIE 78

Query: 25  MLH-CGIAP 2
           M+  C + P
Sbjct: 79  MVEDCSVEP 87


>ref|XP_011623647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Amborella trichopoda]
          Length = 585

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 30/70 (42%), Positives = 50/70 (71%)
 Frame = -2

Query: 211 SHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLF 32
           SH+P +L+++LEF+A+S    LDYA++IF S++ PT+F +NT+ R+ S ++ P  SI  F
Sbjct: 41  SHNPYALSSILEFTAISPSGSLDYALQIFNSIDSPTVFYWNTMIRAFSTAHSPLNSIEFF 100

Query: 31  LEMLHCGIAP 2
           + M+  G+ P
Sbjct: 101 IRMMEQGVVP 110


>ref|XP_010918387.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305,
           partial [Elaeis guineensis]
          Length = 488

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 31/61 (50%), Positives = 43/61 (70%)
 Frame = -2

Query: 184 LLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLEMLHCGIA 5
           LL FSA+SD   +DY+ R+FR+L  PTIF +NTL R  S S +P+ SI L+ +ML  G++
Sbjct: 1   LLLFSAVSDSGDIDYSCRVFRTLPAPTIFIYNTLIRGFSKSKNPNCSISLYTQMLRAGVS 60

Query: 4   P 2
           P
Sbjct: 61  P 61


>ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305-like [Glycine max]
          Length = 548

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 31/70 (44%), Positives = 48/70 (68%)
 Frame = -2

Query: 211 SHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLF 32
           S D   ++ +L FSALS+   ++Y+ R+F  L+ PTIF++NT+ R  S S +P QS+ +F
Sbjct: 43  SQDDPFISKILCFSALSNSGDINYSYRVFSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIF 102

Query: 31  LEMLHCGIAP 2
           L+ML  G+AP
Sbjct: 103 LKMLRLGVAP 112


>ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum tuberosum]
          Length = 477

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 30/69 (43%), Positives = 47/69 (68%)
 Frame = -2

Query: 208 HDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFL 29
           HD  + + LL FSALS+   L YA+R+F S+N P  F +NTL R+ + S++P Q++LL++
Sbjct: 59  HDNYAASRLLSFSALSESGSLSYAVRLFDSINEPNSFMWNTLIRAQAGSSNPRQALLLYV 118

Query: 28  EMLHCGIAP 2
           +M    +AP
Sbjct: 119 KMQRLCVAP 127


>ref|XP_007043264.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508707199|gb|EOX99095.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 530

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = -2

Query: 217 LKSHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSIL 38
           L  HDP S T LL F+A SD  ++DYA R+F  L  P +F +N++ R  S S +P++SI 
Sbjct: 30  LSHHDPIS-TKLLSFAAFSDTGNVDYAYRVFSRLPTPRVFNWNSIIRGYSNSKNPNKSIS 88

Query: 37  LFLEMLHCGIAP 2
            F+ ML  G+ P
Sbjct: 89  AFINMLRAGVFP 100


>ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355481759|gb|AES62962.1| PPR containing plant-like
           protein [Medicago truncatula]
          Length = 550

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 29/70 (41%), Positives = 47/70 (67%)
 Frame = -2

Query: 211 SHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLF 32
           SH+ + +  +L FSALS+   +DY+ R+F  ++ PTIF++N + R  S S +P  S+ +F
Sbjct: 43  SHEYSFIFKILSFSALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIF 102

Query: 31  LEMLHCGIAP 2
           L+ML  G+AP
Sbjct: 103 LKMLRHGVAP 112


>ref|XP_010243893.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           isoform X2 [Nelumbo nucifera]
          Length = 408

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 28/63 (44%), Positives = 45/63 (71%)
 Frame = -2

Query: 190 TALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLEMLHCG 11
           T +L FSA+S+   +DY+ ++FR L+ PTIF +NT+ R  S S +P++SI +F +ML  G
Sbjct: 50  TRILSFSAISNSGDIDYSYQVFRHLSNPTIFNWNTVIRGYSRSKNPNRSISVFTQMLRVG 109

Query: 10  IAP 2
           ++P
Sbjct: 110 VSP 112


>ref|XP_010243892.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           isoform X1 [Nelumbo nucifera]
          Length = 531

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 28/63 (44%), Positives = 45/63 (71%)
 Frame = -2

Query: 190 TALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLEMLHCG 11
           T +L FSA+S+   +DY+ ++FR L+ PTIF +NT+ R  S S +P++SI +F +ML  G
Sbjct: 50  TRILSFSAISNSGDIDYSYQVFRHLSNPTIFNWNTVIRGYSRSKNPNRSISVFTQMLRVG 109

Query: 10  IAP 2
           ++P
Sbjct: 110 VSP 112


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 26/68 (38%), Positives = 48/68 (70%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           D  + + LL F ALS+ + ++YAI++F+S+  P IF +NT+ R+L+ S++P Q++  +++
Sbjct: 80  DHFAASRLLSFCALSNSRDINYAIKLFKSIQDPNIFMWNTIIRALANSSNPDQALFFYIQ 139

Query: 25  MLHCGIAP 2
           ML  G+ P
Sbjct: 140 MLRLGVCP 147


>ref|XP_008803539.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           [Phoenix dactylifera] gi|672167178|ref|XP_008803540.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305 [Phoenix dactylifera]
           gi|672167180|ref|XP_008803541.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g08305
           [Phoenix dactylifera] gi|672167182|ref|XP_008803542.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At5g08305 [Phoenix dactylifera]
           gi|672167184|ref|XP_008803543.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g08305
           [Phoenix dactylifera]
          Length = 537

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = -2

Query: 199 NSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLEML 20
           N L + L FSA+ D   +DY+ R+FR+L  PT F +NTL R  S S +P+ SI L+ +ML
Sbjct: 45  NFLISKLLFSAVFDYGDIDYSCRVFRTLPAPTTFIYNTLIRGFSKSKNPNSSISLYTQML 104

Query: 19  HCGIAP 2
             G++P
Sbjct: 105 RAGVSP 110


>gb|ERN09485.1| hypothetical protein AMTR_s00029p00110030 [Amborella trichopoda]
          Length = 305

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 27/70 (38%), Positives = 47/70 (67%)
 Frame = -2

Query: 211 SHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLF 32
           SH   +++ ++ F A+SDPK+L+YA+ +F  +  PT F +NT+ R  S S +P ++IL+F
Sbjct: 35  SHCNFAMSKIIHFCAVSDPKNLEYALSLFNQVTNPTNFIWNTMIRGFSISQNPQKAILIF 94

Query: 31  LEMLHCGIAP 2
            +ML   ++P
Sbjct: 95  TKMLQKSLSP 104


>ref|XP_010550274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Tarenaya hassleriana]
          Length = 464

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = -2

Query: 208 HDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFL 29
           HD  + + LL FSALS+P  L YA RIF ++  P  F +NTL R+ +  N+P +++LL++
Sbjct: 18  HDSFAASRLLCFSALSEPSDLGYATRIFENVRNPNTFMWNTLIRAHANGNNPTRALLLYV 77

Query: 28  EMLHCGIAP 2
           +M   G+ P
Sbjct: 78  KMTRLGVFP 86


>ref|XP_008229311.1| PREDICTED: pentatricopeptide repeat-containing protein At5g08305
           [Prunus mume]
          Length = 543

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/70 (41%), Positives = 47/70 (67%)
 Frame = -2

Query: 211 SHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLF 32
           S + +  + +L FSALSD  ++DY+ R+   L  PTIF +NT+ R  S S +P++SI +F
Sbjct: 44  SQEQSLTSKILSFSALSDLGNIDYSYRVLSQLPNPTIFYWNTVIRGYSKSKNPNRSISVF 103

Query: 31  LEMLHCGIAP 2
           ++ML  G++P
Sbjct: 104 VKMLRDGVSP 113


>ref|XP_008220652.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Prunus mume]
          Length = 738

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP S + L+  SALS    LDYA ++F  +  P ++ +NTL R+ ++S+ P +SIL+FLE
Sbjct: 61  DPYSASKLITASALSSFSSLDYARQVFDQIPQPNVYTWNTLIRAYASSSDPAESILIFLE 120

Query: 25  ML-HCGIAP 2
           ML HC   P
Sbjct: 121 MLDHCSECP 129


>emb|CDP19158.1| unnamed protein product [Coffea canephora]
          Length = 542

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 30/72 (41%), Positives = 47/72 (65%)
 Frame = -2

Query: 217 LKSHDPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSIL 38
           L  H P + + +L FSA+S    +DYA + F  L+ PTIF +NT+ R+ S S +P++S+ 
Sbjct: 44  LSDHHPFA-SKVLSFSAVSSSGDIDYANQFFLRLSDPTIFNYNTMIRAYSNSKNPNKSVS 102

Query: 37  LFLEMLHCGIAP 2
           LF++ML  G+ P
Sbjct: 103 LFVDMLRVGVLP 114


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP S + L+  +ALS    LDYA ++F  +  P ++ +NTL R+ ++S++PHQS+L+FL 
Sbjct: 66  DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125

Query: 25  MLH 17
           MLH
Sbjct: 126 MLH 128


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 743

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = -2

Query: 205 DPNSLTALLEFSALSDPKHLDYAIRIFRSLNPPTIFAFNTLFRSLSASNHPHQSILLFLE 26
           DP S + L+  +ALS    LDYA ++F  +  P ++ +NTL R+ ++S++PHQS+L+FL 
Sbjct: 66  DPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLR 125

Query: 25  MLH 17
           MLH
Sbjct: 126 MLH 128


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