BLASTX nr result

ID: Cinnamomum25_contig00034574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00034574
         (261 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010276475.1| PREDICTED: putative pentatricopeptide repeat...   100   5e-19
ref|XP_008811846.1| PREDICTED: pentatricopeptide repeat-containi...    81   3e-13
ref|XP_009394467.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
ref|XP_010911486.1| PREDICTED: pentatricopeptide repeat-containi...    75   2e-11
gb|ERN16915.1| hypothetical protein AMTR_s00057p00172690 [Ambore...    60   4e-07

>ref|XP_010276475.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial [Nelumbo nucifera]
          Length = 445

 Score =  100 bits (248), Expect = 5e-19
 Identities = 43/75 (57%), Positives = 60/75 (80%)
 Frame = -2

Query: 227 SSNDWTFEQRMEEAFNVLNLMEIQNMSPDPSLFCLLLQSCADAANLQTLKTLHQKIIDSN 48
           ++N+W+FEQR++EA NVL LME Q + P+PSLFC+LL+SCADA NL+  KT+H KI+ + 
Sbjct: 56  ATNEWSFEQRIQEALNVLELMEAQGIEPEPSLFCILLKSCADAENLEFGKTIHSKIVGTE 115

Query: 47  LQHDPFVANNLVTAY 3
           L++D FV NNL+  Y
Sbjct: 116 LENDVFVVNNLINLY 130


>ref|XP_008811846.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Phoenix dactylifera]
          Length = 452

 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 39/85 (45%), Positives = 56/85 (65%)
 Frame = -2

Query: 257 HPSSRAVHVSSSNDWTFEQRMEEAFNVLNLMEIQNMSPDPSLFCLLLQSCADAANLQTLK 78
           HP   A+H +   DW  EQR+EE+ +VL+LM+ Q++SPDP+L C LL +CADA NL+  +
Sbjct: 40  HP---ALHSAPPADWPLEQRLEESLSVLDLMDAQSISPDPALLCTLLNACADARNLRLGR 96

Query: 77  TLHQKIIDSNLQHDPFVANNLVTAY 3
            +H +   + LQ  P VAN L+  Y
Sbjct: 97  LVHDRAARAGLQAHPAVANGLLRLY 121


>ref|XP_009394467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Musa acuminata subsp. malaccensis]
          Length = 444

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 37/85 (43%), Positives = 52/85 (61%)
 Frame = -2

Query: 257 HPSSRAVHVSSSNDWTFEQRMEEAFNVLNLMEIQNMSPDPSLFCLLLQSCADAANLQTLK 78
           H   R +H S+  +W  +QR+ E+  +L+LME Q++SPDP L   LL+SCADA  L+  +
Sbjct: 38  HNRRRTLH-SAPAEWPLDQRIRESLAILDLMETQSISPDPELLAALLKSCADAGTLRLGR 96

Query: 77  TLHQKIIDSNLQHDPFVANNLVTAY 3
            +H K   + LQ  P VAN LV  Y
Sbjct: 97  VVHDKATQAGLQSHPLVANTLVLLY 121


>ref|XP_010911486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Elaeis guineensis]
          Length = 453

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 37/85 (43%), Positives = 54/85 (63%)
 Frame = -2

Query: 257 HPSSRAVHVSSSNDWTFEQRMEEAFNVLNLMEIQNMSPDPSLFCLLLQSCADAANLQTLK 78
           HP   A+H +   DW  EQR+EE+  VL+LM+ Q+++PDP+L   LL +CADA NL+  +
Sbjct: 40  HP---ALHSTPPADWPLEQRLEESLAVLDLMDAQSITPDPALLSALLNACADARNLRLGR 96

Query: 77  TLHQKIIDSNLQHDPFVANNLVTAY 3
            +H +   + LQ  P VAN L+  Y
Sbjct: 97  LVHDRAARAGLQTHPAVANGLLRLY 121


>gb|ERN16915.1| hypothetical protein AMTR_s00057p00172690 [Amborella trichopoda]
          Length = 454

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 27/77 (35%), Positives = 47/77 (61%)
 Frame = -2

Query: 233 VSSSNDWTFEQRMEEAFNVLNLMEIQNMSPDPSLFCLLLQSCADAANLQTLKTLHQKIID 54
           + S + W  ++R++EA  VL++M  Q + PD +LFC+LL+ C++  +  +   +H KI  
Sbjct: 57  IPSKDQWNLQKRVKEAIEVLDMMHAQGLPPDRTLFCILLKMCSENLDFSSGLLIHDKIRV 116

Query: 53  SNLQHDPFVANNLVTAY 3
            +L+ D  VAN L+  Y
Sbjct: 117 LDLETDIMVANKLMDFY 133


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