BLASTX nr result

ID: Cinnamomum25_contig00033253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00033253
         (550 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010905676.1| PREDICTED: exonuclease DPD1, chloroplastic/m...    77   4e-12
ref|XP_010905672.1| PREDICTED: exonuclease DPD1, chloroplastic/m...    77   4e-12
ref|XP_008813716.1| PREDICTED: three prime repair exonuclease 2-...    75   2e-11
ref|XP_006855354.2| PREDICTED: exonuclease DPD1, chloroplastic/m...    68   3e-09
gb|ERN16821.1| hypothetical protein AMTR_s00057p00109500 [Ambore...    63   7e-08
emb|CBI39565.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_002282861.1| PREDICTED: exonuclease DPD1, chloroplastic/m...    57   4e-06

>ref|XP_010905676.1| PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial isoform X2
           [Elaeis guineensis]
          Length = 263

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = -2

Query: 267 MSLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNA 88
           MSLA+IWSGNF+ +RN+L S+  FKL RL T      +LD GR N RS TT+ E RN  +
Sbjct: 1   MSLAAIWSGNFHQIRNSLGSNCCFKLFRLHTEFIPGKVLDAGRCNPRSFTTRSEGRNWKS 60

Query: 87  QSNQSYGVKLELLDGTV 37
           Q ++S  + L+L DGTV
Sbjct: 61  QGSKSSSINLKLHDGTV 77


>ref|XP_010905672.1| PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial isoform X1
           [Elaeis guineensis] gi|743868833|ref|XP_010905673.1|
           PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial
           isoform X1 [Elaeis guineensis]
           gi|743868837|ref|XP_010905674.1| PREDICTED: exonuclease
           DPD1, chloroplastic/mitochondrial isoform X1 [Elaeis
           guineensis] gi|743868841|ref|XP_010905675.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial isoform X1
           [Elaeis guineensis]
          Length = 316

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = -2

Query: 267 MSLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNA 88
           MSLA+IWSGNF+ +RN+L S+  FKL RL T      +LD GR N RS TT+ E RN  +
Sbjct: 1   MSLAAIWSGNFHQIRNSLGSNCCFKLFRLHTEFIPGKVLDAGRCNPRSFTTRSEGRNWKS 60

Query: 87  QSNQSYGVKLELLDGTV 37
           Q ++S  + L+L DGTV
Sbjct: 61  QGSKSSSINLKLHDGTV 77


>ref|XP_008813716.1| PREDICTED: three prime repair exonuclease 2-like [Phoenix
           dactylifera] gi|672188956|ref|XP_008813717.1| PREDICTED:
           three prime repair exonuclease 2-like [Phoenix
           dactylifera]
          Length = 317

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 38/77 (49%), Positives = 52/77 (67%)
 Frame = -2

Query: 267 MSLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNA 88
           MSLA++WSGNF+ +RN+L  +  F+L RL T      +LD GR N RS TT+ E RN  +
Sbjct: 1   MSLAAMWSGNFHQIRNSLGCNCCFRLFRLHTEFIPGKVLDAGRCNPRSFTTRSEGRNWKS 60

Query: 87  QSNQSYGVKLELLDGTV 37
           QS++S  + L+L DGTV
Sbjct: 61  QSSKSSSINLKLHDGTV 77


>ref|XP_006855354.2| PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Amborella
           trichopoda]
          Length = 339

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 40/102 (39%), Positives = 52/102 (50%)
 Frame = -2

Query: 330 FQDCSWRAQIFLKGNCLFQTTMSLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTML 151
           FQD         K   L QT M L  +WS N +HLR +L  + SF+LL+  T  +    L
Sbjct: 8   FQDPKLSIPFVQKAKLLLQT-MPLVGVWSENLHHLRTSLGITCSFQLLKYSTCSSVGRTL 66

Query: 150 DTGRSNARSLTTKVEARNRNAQSNQSYGVKLELLDGTVIRRT 25
            TGR    S+  KVE     +QS +S  ++LELLDG   R T
Sbjct: 67  STGRCKLHSIGAKVEGNQPQSQSEKSCDIRLELLDGKYTRTT 108


>gb|ERN16821.1| hypothetical protein AMTR_s00057p00109500 [Amborella trichopoda]
          Length = 312

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 33/81 (40%), Positives = 45/81 (55%)
 Frame = -2

Query: 267 MSLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNA 88
           M L  +WS N +HLR +L  + SF+LL+  T  +    L TGR    S+  KVE     +
Sbjct: 1   MPLVGVWSENLHHLRTSLGITCSFQLLKYSTCSSVGRTLSTGRCKLHSIGAKVEGNQPQS 60

Query: 87  QSNQSYGVKLELLDGTVIRRT 25
           QS +S  ++LELLDG   R T
Sbjct: 61  QSEKSCDIRLELLDGKYTRTT 81


>emb|CBI39565.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = -2

Query: 264 SLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNAQ 85
           +LAS W  +F+ L +T  SS+SFKLL   T G      ++ R   R +TTK E RN+  Q
Sbjct: 15  TLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGG--NSRRWTRRPITTKSEGRNKYTQ 72

Query: 84  SNQSYGVKLELLDGTVIRRTKPKAKKLQ 1
           S++   ++ E++DGTV   TK    KL+
Sbjct: 73  SSKRSNIRHEIVDGTVSTSTKLIVDKLE 100


>ref|XP_002282861.1| PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|225450651|ref|XP_002282855.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|731415793|ref|XP_010659669.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|731415795|ref|XP_010659670.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|731415797|ref|XP_010659671.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|731415799|ref|XP_010659672.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera] gi|731415801|ref|XP_010659673.1| PREDICTED:
           exonuclease DPD1, chloroplastic/mitochondrial [Vitis
           vinifera]
          Length = 337

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 35/88 (39%), Positives = 51/88 (57%)
 Frame = -2

Query: 264 SLASIWSGNFYHLRNTLTSSNSFKLLRLGTYGTSQTMLDTGRSNARSLTTKVEARNRNAQ 85
           +LAS W  +F+ L +T  SS+SFKLL   T G      ++ R   R +TTK E RN+  Q
Sbjct: 20  TLASFWRESFHSLGSTCRSSSSFKLLGSHTNGLEGG--NSRRWTRRPITTKSEGRNKYTQ 77

Query: 84  SNQSYGVKLELLDGTVIRRTKPKAKKLQ 1
           S++   ++ E++DGTV   TK    KL+
Sbjct: 78  SSKRSNIRHEIVDGTVSTSTKLIVDKLE 105


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