BLASTX nr result
ID: Cinnamomum25_contig00032969
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum25_contig00032969 (485 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotei... 56 2e-08 ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotei... 59 1e-06 ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotei... 58 2e-06 ref|XP_006856031.1| PREDICTED: U1 small nuclear ribonucleoprotei... 55 4e-06 gb|ADE76503.1| unknown [Picea sitchensis] 51 4e-06 ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotei... 56 8e-06 >ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Elaeis guineensis] Length = 520 Score = 56.2 bits (134), Expect(2) = 2e-08 Identities = 26/36 (72%), Positives = 30/36 (83%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDR 378 TRIGGE++NQKYSGRE Q++AS SEEPRSR DR Sbjct: 233 TRIGGEEVNQKYSGREQQQVASGRPRSEEPRSRDDR 268 Score = 28.9 bits (63), Expect(2) = 2e-08 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 364 RSPGKEEGIETEHEKSRERSHDK 296 R +E G E E E+SRERS+D+ Sbjct: 272 REKSRERGRERERERSRERSYDR 294 >ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera] gi|672120404|ref|XP_008783466.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera] Length = 512 Score = 58.9 bits (141), Expect = 1e-06 Identities = 26/37 (70%), Positives = 32/37 (86%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375 TR+GGE++NQK+SGRE Q+IAS H+ SEEPR R DRH Sbjct: 233 TRVGGEEVNQKHSGREQQQIASGHSRSEEPRVRDDRH 269 >ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform X1 [Elaeis guineensis] Length = 500 Score = 58.2 bits (139), Expect = 2e-06 Identities = 27/37 (72%), Positives = 30/37 (81%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375 TRIGGE++NQKYSGRE Q+ A H SEEPRSR DRH Sbjct: 233 TRIGGEEVNQKYSGREQQQGALEHTRSEEPRSRDDRH 269 >ref|XP_006856031.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Amborella trichopoda] gi|548859890|gb|ERN17498.1| hypothetical protein AMTR_s00059p00067090 [Amborella trichopoda] Length = 458 Score = 55.1 bits (131), Expect(2) = 4e-06 Identities = 26/37 (70%), Positives = 32/37 (86%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375 TR+GGE++NQKYSGREPQ+ A+ + SEEPRSR DRH Sbjct: 234 TRVGGEEVNQKYSGREPQQ-ATGGSRSEEPRSRDDRH 269 Score = 21.9 bits (45), Expect(2) = 4e-06 Identities = 7/15 (46%), Positives = 13/15 (86%) Frame = -2 Query: 337 ETEHEKSRERSHDKM 293 + + EKS+ERSH+++ Sbjct: 283 DRDREKSQERSHERV 297 >gb|ADE76503.1| unknown [Picea sitchensis] Length = 221 Score = 50.8 bits (120), Expect(2) = 4e-06 Identities = 21/37 (56%), Positives = 30/37 (81%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375 TR+GGE++NQKYSGREPQ +++ EEP+ R++RH Sbjct: 48 TRVGGEEVNQKYSGREPQLLSTGPPRIEEPKIREERH 84 Score = 26.2 bits (56), Expect(2) = 4e-06 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 Query: 352 KEEGIETEHEKSRERSHDK 296 +E E HE+SRERSH++ Sbjct: 103 REREPERSHERSRERSHER 121 >ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa acuminata subsp. malaccensis] Length = 510 Score = 56.2 bits (134), Expect = 8e-06 Identities = 25/36 (69%), Positives = 32/36 (88%) Frame = -1 Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDR 378 TRIGGE++NQK+SGRE Q+IA+ H+ SEEPR+R DR Sbjct: 233 TRIGGEEVNQKHSGREQQQIAAGHSRSEEPRARDDR 268