BLASTX nr result

ID: Cinnamomum25_contig00032969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00032969
         (485 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotei...    56   2e-08
ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotei...    59   1e-06
ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotei...    58   2e-06
ref|XP_006856031.1| PREDICTED: U1 small nuclear ribonucleoprotei...    55   4e-06
gb|ADE76503.1| unknown [Picea sitchensis]                              51   4e-06
ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotei...    56   8e-06

>ref|XP_010919474.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Elaeis
           guineensis]
          Length = 520

 Score = 56.2 bits (134), Expect(2) = 2e-08
 Identities = 26/36 (72%), Positives = 30/36 (83%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDR 378
           TRIGGE++NQKYSGRE Q++AS    SEEPRSR DR
Sbjct: 233 TRIGGEEVNQKYSGREQQQVASGRPRSEEPRSRDDR 268



 Score = 28.9 bits (63), Expect(2) = 2e-08
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 364 RSPGKEEGIETEHEKSRERSHDK 296
           R   +E G E E E+SRERS+D+
Sbjct: 272 REKSRERGRERERERSRERSYDR 294


>ref|XP_008783465.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera] gi|672120404|ref|XP_008783466.1| PREDICTED:
           U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix
           dactylifera]
          Length = 512

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375
           TR+GGE++NQK+SGRE Q+IAS H+ SEEPR R DRH
Sbjct: 233 TRVGGEEVNQKHSGREQQQIASGHSRSEEPRVRDDRH 269


>ref|XP_010933716.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform
           X1 [Elaeis guineensis]
          Length = 500

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375
           TRIGGE++NQKYSGRE Q+ A  H  SEEPRSR DRH
Sbjct: 233 TRIGGEEVNQKYSGREQQQGALEHTRSEEPRSRDDRH 269


>ref|XP_006856031.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Amborella
           trichopoda] gi|548859890|gb|ERN17498.1| hypothetical
           protein AMTR_s00059p00067090 [Amborella trichopoda]
          Length = 458

 Score = 55.1 bits (131), Expect(2) = 4e-06
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375
           TR+GGE++NQKYSGREPQ+ A+  + SEEPRSR DRH
Sbjct: 234 TRVGGEEVNQKYSGREPQQ-ATGGSRSEEPRSRDDRH 269



 Score = 21.9 bits (45), Expect(2) = 4e-06
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 337 ETEHEKSRERSHDKM 293
           + + EKS+ERSH+++
Sbjct: 283 DRDREKSQERSHERV 297


>gb|ADE76503.1| unknown [Picea sitchensis]
          Length = 221

 Score = 50.8 bits (120), Expect(2) = 4e-06
 Identities = 21/37 (56%), Positives = 30/37 (81%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDRH 375
           TR+GGE++NQKYSGREPQ +++     EEP+ R++RH
Sbjct: 48  TRVGGEEVNQKYSGREPQLLSTGPPRIEEPKIREERH 84



 Score = 26.2 bits (56), Expect(2) = 4e-06
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 352 KEEGIETEHEKSRERSHDK 296
           +E   E  HE+SRERSH++
Sbjct: 103 REREPERSHERSRERSHER 121


>ref|XP_009381289.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Musa
           acuminata subsp. malaccensis]
          Length = 510

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 25/36 (69%), Positives = 32/36 (88%)
 Frame = -1

Query: 485 TRIGGEDLNQKYSGREPQKIASVHAHSEEPRSRKDR 378
           TRIGGE++NQK+SGRE Q+IA+ H+ SEEPR+R DR
Sbjct: 233 TRIGGEEVNQKHSGREQQQIAAGHSRSEEPRARDDR 268


Top