BLASTX nr result

ID: Cinnamomum25_contig00032724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00032724
         (281 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nel...    61   3e-07
ref|XP_010696608.1| PREDICTED: FBD-associated F-box protein At4g...    57   6e-06

>ref|XP_010278396.1| PREDICTED: F-box protein At4g09920-like [Nelumbo nucifera]
          Length = 554

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 34/79 (43%), Positives = 42/79 (53%)
 Frame = -1

Query: 239 DRLSDLPESLLHYILSLMPLKXXXXXXXXXXXXRNLWKHMCFHTTTLDFGMEFAQNQTPE 60
           DR+S LP+ +L YILS +PLK            R L K    H TT DFG        PE
Sbjct: 73  DRISALPDEILLYILSKLPLKFAIGTSILSTRWRELMKCFWRHATTFDFGALSNAQIVPE 132

Query: 59  EFAAMVNRYLQLHDGKKIE 3
           +F   +N+YLQLHDG  I+
Sbjct: 133 KFVHTINQYLQLHDGDPID 151


>ref|XP_010696608.1| PREDICTED: FBD-associated F-box protein At4g10400-like [Beta
           vulgaris subsp. vulgaris] gi|870843650|gb|KMS96790.1|
           hypothetical protein BVRB_8g199730 [Beta vulgaris subsp.
           vulgaris]
          Length = 491

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 28/79 (35%), Positives = 47/79 (59%)
 Frame = -1

Query: 239 DRLSDLPESLLHYILSLMPLKXXXXXXXXXXXXRNLWKHMCFHTTTLDFGMEFAQNQTPE 60
           D +SDLP+++LH ILSL+P K            R +      + ++LDFG EFA+ Q P 
Sbjct: 5   DLISDLPDAILHLILSLIPTKSVIRASSISKRWREISMEHLTYASSLDFGEEFAKQQKPN 64

Query: 59  EFAAMVNRYLQLHDGKKIE 3
           +FA  +N+ L+++  +K++
Sbjct: 65  QFADNLNKILRINKSEKLD 83


Top