BLASTX nr result

ID: Cinnamomum25_contig00032642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00032642
         (458 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010266747.1| PREDICTED: RING-H2 finger protein ATL52-like...    70   4e-10
ref|XP_010272972.1| PREDICTED: RING-H2 finger protein ATL52-like...    63   7e-08

>ref|XP_010266747.1| PREDICTED: RING-H2 finger protein ATL52-like [Nelumbo nucifera]
          Length = 409

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 48/115 (41%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
 Frame = -1

Query: 458 EIQRVRXXXXXXXXXSAMIGISLANLPSIDSEGSSPASGVYPTGSKKSNFGESSSQKRTF 279
           ++Q VR         +AMI +S+AN   + SE SS         S KSN           
Sbjct: 311 KMQPVRRSVSMDSSQAAMISLSMANFLPLQSEASS---------SNKSN-------SAIV 354

Query: 278 LKHGC-SQSISNMLSNGSKGTSLQKGPVLMKRSFSGRGKFLLRRYGRSRNPILPL 117
            KHG  + SI  ++ + S   SLQKGP+ MKRSFS  GKFL  +Y RSRN ILPL
Sbjct: 355 TKHGSQNMSIVKLIGSSSAKQSLQKGPISMKRSFSSGGKFLFSKYSRSRNSILPL 409


>ref|XP_010272972.1| PREDICTED: RING-H2 finger protein ATL52-like [Nelumbo nucifera]
          Length = 409

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = -1

Query: 458 EIQRVRXXXXXXXXXSAMIGISLANLPSIDSEGSSPASGVYPTGSKKSNFGESSSQKRTF 279
           E+Q V          +A+I  S+AN   + SEGSS    V            + S     
Sbjct: 306 EMQPVGRSVSMDSSQAAIISFSIANSLQLQSEGSSSTRLVLV----------NKSDPDIV 355

Query: 278 LKHGC-SQSISNMLSNGSKGTSLQKGPVLMKRSFSGRGKFLLRRYGRSRNPILPL 117
           +KH   S S+ + + + S G SL KGPV MKRSFS  GKF L RYGRSRN ILPL
Sbjct: 356 IKHVSESPSVLSEMGSSSIGRSLLKGPVSMKRSFSSGGKF-LSRYGRSRNSILPL 409


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