BLASTX nr result

ID: Cinnamomum25_contig00030586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00030586
         (336 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011657190.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
ref|XP_011657187.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06
gb|KGN47232.1| hypothetical protein Csa_6G222480 [Cucumis sativus]     57   4e-06

>ref|XP_011657190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic isoform X2 [Cucumis sativus]
          Length = 1283

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 28/45 (62%)
 Frame = +3

Query: 201 QKFTYSRASPSIRWPNLKLQQETPIPDPHHFHTSPPPIPTVQIQH 335
           QKF YSRASPS+RWPNLKL +   +P   HF   PPP P     H
Sbjct: 39  QKFRYSRASPSVRWPNLKLNESFQLPSQTHFTAPPPPPPPPSQTH 83


>ref|XP_011657187.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic isoform X1 [Cucumis sativus]
           gi|778714110|ref|XP_011657188.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic isoform X1 [Cucumis sativus]
           gi|778714114|ref|XP_011657189.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18110,
           chloroplastic isoform X1 [Cucumis sativus]
          Length = 1470

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 28/45 (62%)
 Frame = +3

Query: 201 QKFTYSRASPSIRWPNLKLQQETPIPDPHHFHTSPPPIPTVQIQH 335
           QKF YSRASPS+RWPNLKL +   +P   HF   PPP P     H
Sbjct: 39  QKFRYSRASPSVRWPNLKLNESFQLPSQTHFTAPPPPPPPPSQTH 83


>gb|KGN47232.1| hypothetical protein Csa_6G222480 [Cucumis sativus]
          Length = 1285

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 25/45 (55%), Positives = 28/45 (62%)
 Frame = +3

Query: 201 QKFTYSRASPSIRWPNLKLQQETPIPDPHHFHTSPPPIPTVQIQH 335
           QKF YSRASPS+RWPNLKL +   +P   HF   PPP P     H
Sbjct: 39  QKFRYSRASPSVRWPNLKLNESFQLPSQTHFTAPPPPPPPPSQTH 83


Top