BLASTX nr result
ID: Cinnamomum25_contig00030244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cinnamomum25_contig00030244
(696 letters)
Database: ./nr
69,698,275 sequences; 24,982,196,650 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_010940421.1| PREDICTED: general transcription factor IIH ... 138 3e-30
ref|XP_010940418.1| PREDICTED: general transcription factor IIH ... 138 3e-30
ref|XP_010940415.1| PREDICTED: general transcription factor IIH ... 138 3e-30
ref|XP_008778436.1| PREDICTED: general transcription factor IIH ... 135 2e-29
ref|XP_008778431.1| PREDICTED: general transcription factor IIH ... 135 2e-29
ref|XP_010940417.1| PREDICTED: RNA polymerase II transcription f... 132 2e-28
ref|XP_011625495.1| PREDICTED: general transcription factor IIH ... 124 5e-26
gb|ERM95200.1| hypothetical protein AMTR_s00009p00265760 [Ambore... 124 5e-26
ref|XP_009392829.1| PREDICTED: general transcription factor IIH ... 124 7e-26
ref|XP_002447335.1| hypothetical protein SORBIDRAFT_06g033130 [S... 122 2e-25
ref|XP_010242943.1| PREDICTED: general transcription factor IIH ... 122 3e-25
ref|XP_012702092.1| PREDICTED: general transcription factor IIH ... 120 6e-25
ref|XP_004972571.1| PREDICTED: general transcription factor IIH ... 120 6e-25
ref|XP_003635508.2| PREDICTED: general transcription factor IIH ... 120 7e-25
emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera] 120 7e-25
ref|XP_008668679.1| PREDICTED: general transcription factor IIH ... 117 5e-24
ref|XP_003580836.1| PREDICTED: general transcription factor IIH ... 117 5e-24
ref|XP_009596858.1| PREDICTED: general transcription factor IIH ... 117 6e-24
dbj|BAJ91715.1| predicted protein [Hordeum vulgare subsp. vulgare] 117 8e-24
ref|XP_009631136.1| PREDICTED: general transcription factor IIH ... 116 1e-23
>ref|XP_010940421.1| PREDICTED: general transcription factor IIH subunit 4 isoform X4
[Elaeis guineensis]
Length = 390
Score = 138 bits (348), Expect = 3e-30
Identities = 64/73 (87%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSKD+FEA DFARE+GGLLWEDSKKMRL+VRGE
Sbjct: 318 VTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRGE 377
Query: 516 SHQDMRDFLRRQK 478
HQ MRDFLR QK
Sbjct: 378 YHQHMRDFLRHQK 390
>ref|XP_010940418.1| PREDICTED: general transcription factor IIH subunit 4 isoform X3
[Elaeis guineensis] gi|743852573|ref|XP_010940419.1|
PREDICTED: general transcription factor IIH subunit 4
isoform X3 [Elaeis guineensis]
Length = 403
Score = 138 bits (348), Expect = 3e-30
Identities = 64/73 (87%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSKD+FEA DFARE+GGLLWEDSKKMRL+VRGE
Sbjct: 331 VTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRGE 390
Query: 516 SHQDMRDFLRRQK 478
HQ MRDFLR QK
Sbjct: 391 YHQHMRDFLRHQK 403
>ref|XP_010940415.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
[Elaeis guineensis] gi|743852561|ref|XP_010940416.1|
PREDICTED: general transcription factor IIH subunit 4
isoform X1 [Elaeis guineensis]
Length = 451
Score = 138 bits (348), Expect = 3e-30
Identities = 64/73 (87%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSKD+FEA DFARE+GGLLWEDSKKMRL+VRGE
Sbjct: 379 VTDQIRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRGE 438
Query: 516 SHQDMRDFLRRQK 478
HQ MRDFLR QK
Sbjct: 439 YHQHMRDFLRHQK 451
>ref|XP_008778436.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
[Phoenix dactylifera]
Length = 401
Score = 135 bits (341), Expect = 2e-29
Identities = 63/73 (86%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVE+IPSHLYEDFPSK++FEA DFARE+GGLLWEDSKKMRLIVRGE
Sbjct: 329 VTDQIRLWETDRNRVEIIPSHLYEDFPSKEIFEAVCDFAREIGGLLWEDSKKMRLIVRGE 388
Query: 516 SHQDMRDFLRRQK 478
HQ MRDFLR QK
Sbjct: 389 YHQHMRDFLRHQK 401
>ref|XP_008778431.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
[Phoenix dactylifera]
Length = 451
Score = 135 bits (341), Expect = 2e-29
Identities = 63/73 (86%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVE+IPSHLYEDFPSK++FEA DFARE+GGLLWEDSKKMRLIVRGE
Sbjct: 379 VTDQIRLWETDRNRVEIIPSHLYEDFPSKEIFEAVCDFAREIGGLLWEDSKKMRLIVRGE 438
Query: 516 SHQDMRDFLRRQK 478
HQ MRDFLR QK
Sbjct: 439 YHQHMRDFLRHQK 451
>ref|XP_010940417.1| PREDICTED: RNA polymerase II transcription factor B subunit 2
isoform X2 [Elaeis guineensis]
Length = 425
Score = 132 bits (332), Expect = 2e-28
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = -1
Query: 684 IRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGESHQD 505
IRLWETDRNRVEMIPSHLYEDFPSKD+FEA DFARE+GGLLWEDSKKMRL+VRGE HQ
Sbjct: 357 IRLWETDRNRVEMIPSHLYEDFPSKDIFEAVCDFAREIGGLLWEDSKKMRLVVRGEYHQH 416
Query: 504 MRDFLRRQK 478
MRDFLR QK
Sbjct: 417 MRDFLRHQK 425
>ref|XP_011625495.1| PREDICTED: general transcription factor IIH subunit 4 [Amborella
trichopoda]
Length = 451
Score = 124 bits (311), Expect = 5e-26
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVEM +H YEDFPS D++EAA D+ARELGG LWEDSKKMRLIVRGE
Sbjct: 379 VTDQIRLWETDLNRVEMNLAHFYEDFPSMDIYEAACDYARELGGFLWEDSKKMRLIVRGE 438
Query: 516 SHQDMRDFLRRQK 478
H++M+DFLRRQK
Sbjct: 439 MHEEMKDFLRRQK 451
>gb|ERM95200.1| hypothetical protein AMTR_s00009p00265760 [Amborella trichopoda]
Length = 469
Score = 124 bits (311), Expect = 5e-26
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVEM +H YEDFPS D++EAA D+ARELGG LWEDSKKMRLIVRGE
Sbjct: 397 VTDQIRLWETDLNRVEMNLAHFYEDFPSMDIYEAACDYARELGGFLWEDSKKMRLIVRGE 456
Query: 516 SHQDMRDFLRRQK 478
H++M+DFLRRQK
Sbjct: 457 MHEEMKDFLRRQK 469
>ref|XP_009392829.1| PREDICTED: general transcription factor IIH subunit 4 isoform X3
[Musa acuminata subsp. malaccensis]
Length = 451
Score = 124 bits (310), Expect = 7e-26
Identities = 58/73 (79%), Positives = 68/73 (93%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD+NRVE+ PS+LYEDFPSK+VFEAA DFARELGGLL+EDS+ MRL+VR E
Sbjct: 379 VTDQIRLWETDKNRVEITPSYLYEDFPSKEVFEAACDFARELGGLLFEDSRTMRLVVRVE 438
Query: 516 SHQDMRDFLRRQK 478
HQ+MRDFLRRQ+
Sbjct: 439 VHQEMRDFLRRQR 451
>ref|XP_002447335.1| hypothetical protein SORBIDRAFT_06g033130 [Sorghum bicolor]
gi|241938518|gb|EES11663.1| hypothetical protein
SORBIDRAFT_06g033130 [Sorghum bicolor]
Length = 451
Score = 122 bits (306), Expect = 2e-25
Identities = 57/73 (78%), Positives = 65/73 (89%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSK+ FE D+AR+ G LLWEDSK+MRLIVRGE
Sbjct: 379 VTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCDYARDNGYLLWEDSKRMRLIVRGE 438
Query: 516 SHQDMRDFLRRQK 478
H +MR+FLRRQ+
Sbjct: 439 FHPEMREFLRRQR 451
>ref|XP_010242943.1| PREDICTED: general transcription factor IIH subunit 4 [Nelumbo
nucifera]
Length = 451
Score = 122 bits (305), Expect = 3e-25
Identities = 56/73 (76%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVEMIPSHLY++FPSK VFEAA +FARE GGLLWED KKMR++V+GE
Sbjct: 378 VTDQIRLWETDLNRVEMIPSHLYDEFPSKGVFEAACEFARENGGLLWEDPKKMRIVVKGE 437
Query: 516 SHQDMRDFLRRQK 478
H MR+FLR QK
Sbjct: 438 IHMQMREFLRHQK 450
>ref|XP_012702092.1| PREDICTED: general transcription factor IIH subunit 4 isoform X2
[Setaria italica]
Length = 427
Score = 120 bits (302), Expect = 6e-25
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSK+ FE D AR+ G LLWEDSK+MRLIVRGE
Sbjct: 355 VTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCDHARDHGYLLWEDSKRMRLIVRGE 414
Query: 516 SHQDMRDFLRRQK 478
H +MR+FLRRQ+
Sbjct: 415 FHPEMREFLRRQR 427
>ref|XP_004972571.1| PREDICTED: general transcription factor IIH subunit 4 isoform X1
[Setaria italica]
Length = 451
Score = 120 bits (302), Expect = 6e-25
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRVEMIPSHLYEDFPSK+ FE D AR+ G LLWEDSK+MRLIVRGE
Sbjct: 379 VTDQIRLWETDRNRVEMIPSHLYEDFPSKEWFEQCCDHARDHGYLLWEDSKRMRLIVRGE 438
Query: 516 SHQDMRDFLRRQK 478
H +MR+FLRRQ+
Sbjct: 439 FHPEMREFLRRQR 451
>ref|XP_003635508.2| PREDICTED: general transcription factor IIH subunit 4 [Vitis
vinifera]
Length = 451
Score = 120 bits (301), Expect = 7e-25
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVE +PSHLY++FPS+DVFEAA DFARE GGLLWEDSKKMRL+V+ E
Sbjct: 379 VTDQIRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAE 438
Query: 516 SHQDMRDFLRRQK 478
H MR++LRR K
Sbjct: 439 IHLHMREYLRRSK 451
>emb|CAN81292.1| hypothetical protein VITISV_005315 [Vitis vinifera]
Length = 451
Score = 120 bits (301), Expect = 7e-25
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVE +PSHLY++FPS+DVFEAA DFARE GGLLWEDSKKMRL+V+ E
Sbjct: 379 VTDQIRLWETDLNRVETMPSHLYDEFPSRDVFEAACDFAREYGGLLWEDSKKMRLVVKAE 438
Query: 516 SHQDMRDFLRRQK 478
H MR++LRR K
Sbjct: 439 IHLHMREYLRRSK 451
>ref|XP_008668679.1| PREDICTED: general transcription factor IIH subunit 4 [Zea mays]
gi|414584751|tpg|DAA35322.1| TPA: hypothetical protein
ZEAMMB73_386928 [Zea mays]
Length = 451
Score = 117 bits (294), Expect = 5e-24
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETD NRVEMIPSHLYEDFPSK+ FE D+AR+ G LLWED K+MRLIVRGE
Sbjct: 379 VTDQIRLWETDLNRVEMIPSHLYEDFPSKEWFEQCCDYARDNGYLLWEDPKRMRLIVRGE 438
Query: 516 SHQDMRDFLRRQK 478
H +MR+FLRRQ+
Sbjct: 439 FHPEMREFLRRQR 451
>ref|XP_003580836.1| PREDICTED: general transcription factor IIH subunit 4-like
[Brachypodium distachyon]
Length = 451
Score = 117 bits (294), Expect = 5e-24
Identities = 55/73 (75%), Positives = 64/73 (87%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWETDRNRV+M+ SH+YEDFPSKD+FE D AR+ G LLWEDSKKMRLIVR E
Sbjct: 379 VTDQIRLWETDRNRVDMVLSHVYEDFPSKDMFEQCCDLARDNGFLLWEDSKKMRLIVRVE 438
Query: 516 SHQDMRDFLRRQK 478
HQ+MR+FLRRQ+
Sbjct: 439 FHQEMREFLRRQR 451
>ref|XP_009596858.1| PREDICTED: general transcription factor IIH subunit 4-like
[Nicotiana tomentosiformis]
Length = 452
Score = 117 bits (293), Expect = 6e-24
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWE+D NRVEMIP+HLY++FPSKDVFEAA DFARE GGLLWEDSK++R+IV+ +
Sbjct: 380 VTDQIRLWESDLNRVEMIPAHLYDEFPSKDVFEAACDFAREYGGLLWEDSKQLRIIVKAD 439
Query: 516 SHQDMRDFLRRQK 478
+M++FLRRQK
Sbjct: 440 ILTEMKEFLRRQK 452
>dbj|BAJ91715.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 451
Score = 117 bits (292), Expect = 8e-24
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWE DRNRVEMI SH+YEDFPSKD+FE D AR+ G LLWED+KKMRLIV GE
Sbjct: 379 VTDQIRLWENDRNRVEMILSHVYEDFPSKDMFEQCCDHARDNGYLLWEDAKKMRLIVSGE 438
Query: 516 SHQDMRDFLRRQK 478
HQ+MR+FLRRQ+
Sbjct: 439 FHQEMREFLRRQR 451
>ref|XP_009631136.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
X2 [Nicotiana tomentosiformis]
Length = 391
Score = 116 bits (290), Expect = 1e-23
Identities = 52/73 (71%), Positives = 66/73 (90%)
Frame = -1
Query: 696 VSDQIRLWETDRNRVEMIPSHLYEDFPSKDVFEAASDFARELGGLLWEDSKKMRLIVRGE 517
V+DQIRLWE+D NRVEM+P+HLY++FPS+DVFEAA DFARE GGLLWEDSK+MR+IV+ +
Sbjct: 318 VTDQIRLWESDLNRVEMMPAHLYDEFPSRDVFEAACDFAREYGGLLWEDSKQMRIIVKAD 377
Query: 516 SHQDMRDFLRRQK 478
+M++FLRRQK
Sbjct: 378 ILTEMKEFLRRQK 390