BLASTX nr result

ID: Cinnamomum25_contig00030189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00030189
         (326 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010262874.1| PREDICTED: helicase protein MOM1-like isofor...    57   5e-06
ref|XP_010262873.1| PREDICTED: helicase protein MOM1-like isofor...    57   5e-06
ref|XP_010262872.1| PREDICTED: helicase protein MOM1-like isofor...    57   5e-06
ref|XP_010262870.1| PREDICTED: helicase protein MOM1-like isofor...    57   5e-06

>ref|XP_010262874.1| PREDICTED: helicase protein MOM1-like isoform X4 [Nelumbo nucifera]
          Length = 2465

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 TKRKTVNKGKNGKQVATGAGEQRKCEKQDN----VVLKNKKRLDARSYRELLKPLGKNVK 95
           TK K     K+ KQ A    EQ + EKQD+    VVLK KKRLDARSYR LL    K  K
Sbjct: 122 TKSKKRKGEKSRKQQALDVREQNRSEKQDSKSTHVVLK-KKRLDARSYRALLSSKTKMAK 180

Query: 94  QPELGKKRKREENSSHKDA 38
           + +LG+K +R++  S  D+
Sbjct: 181 ETDLGEKLRRQDKLSQGDS 199


>ref|XP_010262873.1| PREDICTED: helicase protein MOM1-like isoform X3 [Nelumbo nucifera]
          Length = 2546

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 TKRKTVNKGKNGKQVATGAGEQRKCEKQDN----VVLKNKKRLDARSYRELLKPLGKNVK 95
           TK K     K+ KQ A    EQ + EKQD+    VVLK KKRLDARSYR LL    K  K
Sbjct: 122 TKSKKRKGEKSRKQQALDVREQNRSEKQDSKSTHVVLK-KKRLDARSYRALLSSKTKMAK 180

Query: 94  QPELGKKRKREENSSHKDA 38
           + +LG+K +R++  S  D+
Sbjct: 181 ETDLGEKLRRQDKLSQGDS 199


>ref|XP_010262872.1| PREDICTED: helicase protein MOM1-like isoform X2 [Nelumbo nucifera]
          Length = 2567

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 TKRKTVNKGKNGKQVATGAGEQRKCEKQDN----VVLKNKKRLDARSYRELLKPLGKNVK 95
           TK K     K+ KQ A    EQ + EKQD+    VVLK KKRLDARSYR LL    K  K
Sbjct: 122 TKSKKRKGEKSRKQQALDVREQNRSEKQDSKSTHVVLK-KKRLDARSYRALLSSKTKMAK 180

Query: 94  QPELGKKRKREENSSHKDA 38
           + +LG+K +R++  S  D+
Sbjct: 181 ETDLGEKLRRQDKLSQGDS 199


>ref|XP_010262870.1| PREDICTED: helicase protein MOM1-like isoform X1 [Nelumbo nucifera]
           gi|720021902|ref|XP_010262871.1| PREDICTED: helicase
           protein MOM1-like isoform X1 [Nelumbo nucifera]
          Length = 2569

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = -2

Query: 262 TKRKTVNKGKNGKQVATGAGEQRKCEKQDN----VVLKNKKRLDARSYRELLKPLGKNVK 95
           TK K     K+ KQ A    EQ + EKQD+    VVLK KKRLDARSYR LL    K  K
Sbjct: 122 TKSKKRKGEKSRKQQALDVREQNRSEKQDSKSTHVVLK-KKRLDARSYRALLSSKTKMAK 180

Query: 94  QPELGKKRKREENSSHKDA 38
           + +LG+K +R++  S  D+
Sbjct: 181 ETDLGEKLRRQDKLSQGDS 199


Top