BLASTX nr result

ID: Cinnamomum25_contig00030165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00030165
         (405 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Ambore...    99   4e-35
gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) ...    92   5e-18
ref|XP_002534949.1| conserved hypothetical protein [Ricinus comm...    79   7e-18
ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [...    96   9e-18
emb|CDY45519.1| BnaCnng12780D [Brassica napus]                         84   5e-14
gb|AHY20296.1| cytochrome c oxidase subunit 2-1 (mitochondrion) ...    84   5e-14
gb|ERN04090.1| hypothetical protein AMTR_s05659p00002430 [Ambore...    74   1e-12
gb|ERN16299.1| hypothetical protein AMTR_s00063p00206020 [Ambore...    73   7e-12
gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina]    73   6e-11
gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium r...    66   1e-08
ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion...    44   3e-07

>gb|ERN16302.1| hypothetical protein AMTR_s00063p00208440 [Amborella trichopoda]
          Length = 107

 Score = 99.0 bits (245), Expect(2) = 4e-35
 Identities = 47/54 (87%), Positives = 48/54 (88%)
 Frame = +3

Query: 114 LALYGVPRGSSSASRREECHQLGRYWPLTTRSPAARAPRFKFVILTVSSAPPGA 275
           LALYGVP G SSAS R ECHQLGRYWPLTTRSPAARAPRF FV+L VSSAPPGA
Sbjct: 54  LALYGVPHGFSSASHRGECHQLGRYWPLTTRSPAARAPRFNFVMLIVSSAPPGA 107



 Score = 75.9 bits (185), Expect(2) = 4e-35
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = +2

Query: 2   DTVALPWGRGSPDFHRSLVRPPNEN*GPCAGVSSLRLA 115
           DT+ALPWGRGSPDFHRSLVRPPNEN GPC G+ SLRLA
Sbjct: 18  DTIALPWGRGSPDFHRSLVRPPNENLGPCTGLLSLRLA 55


>gb|AGC81699.1| hypothetical protein DCGMS_00390 (mitochondrion) [Raphanus sativus]
           gi|662020252|gb|AIE42541.1| hypothetical protein
           RadishMT_p010 (mitochondrion) [Raphanus sativus]
          Length = 92

 Score = 92.4 bits (228), Expect(2) = 5e-18
 Identities = 48/69 (69%), Positives = 48/69 (69%)
 Frame = +2

Query: 167 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPXXXXXXXXXXXXXXXXXXAVI 346
           MPSTRALLATNHSLA RSGSAFQVRYPNR LCSTG LAP                  AVI
Sbjct: 1   MPSTRALLATNHSLASRSGSAFQVRYPNRPLCSTGCLAPSSILSTALLLGSLQLQPLAVI 60

Query: 347 ACFSGGSHP 373
           ACFSGGSHP
Sbjct: 61  ACFSGGSHP 69



 Score = 25.0 bits (53), Expect(2) = 5e-18
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 370 PRVVRLSQSGLS 405
           PRVVRLSQSGL+
Sbjct: 69  PRVVRLSQSGLN 80


>ref|XP_002534949.1| conserved hypothetical protein [Ricinus communis]
           gi|223524315|gb|EEF27434.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 78.6 bits (192), Expect(2) = 7e-18
 Identities = 38/39 (97%), Positives = 38/39 (97%)
 Frame = +2

Query: 167 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAP 283
           MPSTRALLATNHSLAGR GSAFQVRYPNRLLCSTGSLAP
Sbjct: 1   MPSTRALLATNHSLAGRLGSAFQVRYPNRLLCSTGSLAP 39



 Score = 38.5 bits (88), Expect(2) = 7e-18
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = +1

Query: 349 LLLGWLAPRVVRLSQSGLS 405
           LLLGWLAP VVRLSQSGLS
Sbjct: 60  LLLGWLAPEVVRLSQSGLS 78


>ref|XP_002527161.1| cytochrome C oxidase, subunit II, putative [Ricinus communis]
           gi|223533482|gb|EEF35227.1| cytochrome C oxidase,
           subunit II, putative [Ricinus communis]
          Length = 139

 Score = 95.9 bits (237), Expect = 9e-18
 Identities = 45/54 (83%), Positives = 49/54 (90%)
 Frame = -1

Query: 405 AEPTLAQPHHPGCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 244
           AE TLAQPHHPGC+PP+KQ ITAS WS REPRSKAVDKI+EGARL VEQRR+LG
Sbjct: 86  AESTLAQPHHPGCDPPKKQDITASDWSCREPRSKAVDKIKEGARLLVEQRRQLG 139


>emb|CDY45519.1| BnaCnng12780D [Brassica napus]
          Length = 296

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -1

Query: 372 GCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 244
           GCEPPEKQAITASGWS REPRSKAVDKIEEGAR PVEQR RLG
Sbjct: 254 GCEPPEKQAITASGWSCREPRSKAVDKIEEGARHPVEQRGRLG 296


>gb|AHY20296.1| cytochrome c oxidase subunit 2-1 (mitochondrion) (mitochondrion)
           [Brassica juncea var. tumida]
          Length = 372

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -1

Query: 372 GCEPPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 244
           GCEPPEKQAITASGWS REPRSKAVDKIEEGAR PVEQR RLG
Sbjct: 330 GCEPPEKQAITASGWSCREPRSKAVDKIEEGARHPVEQRGRLG 372


>gb|ERN04090.1| hypothetical protein AMTR_s05659p00002430 [Amborella trichopoda]
          Length = 115

 Score = 73.9 bits (180), Expect(2) = 1e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = -1

Query: 363 PPEKQAITASGWSSREPRSKAVDKIEEGARLPVEQRRRLG 244
           P +++AITASGWSSREPRS+AVDKIEEGARLPVEQRRRLG
Sbjct: 76  PKKERAITASGWSSREPRSEAVDKIEEGARLPVEQRRRLG 115



 Score = 25.0 bits (53), Expect(2) = 1e-12
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -2

Query: 404 LSPLWLSRTT 375
           LSPLWLSRTT
Sbjct: 66  LSPLWLSRTT 75


>gb|ERN16299.1| hypothetical protein AMTR_s00063p00206020 [Amborella trichopoda]
          Length = 113

 Score = 73.2 bits (178), Expect(2) = 7e-12
 Identities = 42/74 (56%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
 Frame = +2

Query: 167 MPSTRALLATNHSLAGRSGSAFQVRYPNRLLCSTGSLAPXXXXXXXXXXXXXXXXXXAVI 346
           MPSTRALLATNHSL GRS S FQ+RYPNRLLCSTGSL P                  A+I
Sbjct: 1   MPSTRALLATNHSLTGRSSSTFQLRYPNRLLCSTGSLTPSSTLSTTSLLSSLLLQLPALI 60

Query: 347 A-CFSGGS--HPGW 379
           A  F GG    P W
Sbjct: 61  ARSFLGGGAIEPQW 74



 Score = 23.5 bits (49), Expect(2) = 7e-12
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 375 GGAAEPEWAQ 404
           GGA EP+WAQ
Sbjct: 67  GGAIEPQWAQ 76


>gb|KFK42008.1| hypothetical protein AALP_AA2G200300 [Arabis alpina]
          Length = 35

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = -2

Query: 173 MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 69
           MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH
Sbjct: 1   MAFLSAAGTRGTTGHSIQSKQVLGMRRPRKDLNSH 35


>gb|KJB09741.1| hypothetical protein B456_001G161700 [Gossypium raimondii]
          Length = 407

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -1

Query: 135 GALHTEQASLRDETPAQGPQFSLGGRTKDLWKSGLPRPHG 16
           G+  ++Q    DETPAQGPQFSLGGRTKDLWKSGLP PHG
Sbjct: 271 GSQGSKQVLGMDETPAQGPQFSLGGRTKDLWKSGLPCPHG 310


>ref|YP_004927630.1| hypothetical protein AnruMp28 (mitochondrion) [Anomodon rugelii]
           gi|336089487|gb|AEH99677.1| hypothetical protein
           AnruMp28 [Anomodon rugelii]
          Length = 101

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
 Frame = -3

Query: 271 PGGAEETVRITNLKRGARA----------AGERVVSGQ*RPS*WHSSL----RLALEEPR 134
           PG AE+ VRIT+LKRGAR           +GERVV+   +P   +  L      ALE+P+
Sbjct: 20  PGEAEDMVRITSLKRGARPKLDRPSQAGYSGERVVN---KPIVLNPQLMALASAALEKPQ 76

Query: 133 GTPYRAS 113
           GTPYR S
Sbjct: 77  GTPYRVS 83



 Score = 36.6 bits (83), Expect(2) = 3e-07
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -1

Query: 117 QASLRDETPAQGPQFSLGGRT 55
           + S RD+TPAQGP+FSLGG+T
Sbjct: 81  RVSPRDQTPAQGPKFSLGGKT 101


Top