BLASTX nr result

ID: Cinnamomum25_contig00029983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cinnamomum25_contig00029983
         (271 letters)

Database: ./nr 
           69,698,275 sequences; 24,982,196,650 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264260.1| PREDICTED: protein CHROMATIN REMODELING 24 [...    63   9e-08
ref|XP_010270309.1| PREDICTED: protein CHROMATIN REMODELING 24 i...    62   2e-07
ref|XP_010270308.1| PREDICTED: protein CHROMATIN REMODELING 24 i...    62   2e-07

>ref|XP_002264260.1| PREDICTED: protein CHROMATIN REMODELING 24 [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 36/121 (29%)
 Frame = -3

Query: 257 KPLSLNERNDRLLDDISS---------------HQSLSMKNTHD-HQPPAQAPSEQKPIK 126
           K +SLNER++RLL D+S+               H  LS     + H PP +A  E+KP+K
Sbjct: 6   KAMSLNERHNRLLQDLSAQASKHKPEQQPSAQNHALLSFSTISEFHSPPDEAKEEEKPVK 65

Query: 125 VRLEGRRRLCKIQSETLIEPS------HDPTASPVP--------------QIRDILNDLS 6
           V+L+GRRRLCK+ S    E +      ++P  S +               +IR ILNDLS
Sbjct: 66  VKLQGRRRLCKLSSNDDDENTKTGDGFYEPKFSEISDFDSPHHCSNAGGNEIRGILNDLS 125

Query: 5   S 3
           S
Sbjct: 126 S 126


>ref|XP_010270309.1| PREDICTED: protein CHROMATIN REMODELING 24 isoform X2 [Nelumbo
           nucifera]
          Length = 1008

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/83 (42%), Positives = 46/83 (55%)
 Frame = -3

Query: 269 MTTLKPLSLNERNDRLLDDISSHQSLSMKNTHDHQPPAQAPSEQKPIKVRLEGRRRLCKI 90
           M   KPLSLN+R+ RLL+D+SSH+          QPP  +   ++P KV+LEGRRRLCK+
Sbjct: 1   MAEKKPLSLNDRHSRLLEDLSSHR----------QPPKPSQDPEQPRKVKLEGRRRLCKL 50

Query: 89  QSETLIEPSHDPTASPVPQIRDI 21
            S +      D T    P    I
Sbjct: 51  SSTS--RDDDDETVFDAPSFAGI 71


>ref|XP_010270308.1| PREDICTED: protein CHROMATIN REMODELING 24 isoform X1 [Nelumbo
           nucifera]
          Length = 1030

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 35/83 (42%), Positives = 46/83 (55%)
 Frame = -3

Query: 269 MTTLKPLSLNERNDRLLDDISSHQSLSMKNTHDHQPPAQAPSEQKPIKVRLEGRRRLCKI 90
           M   KPLSLN+R+ RLL+D+SSH+          QPP  +   ++P KV+LEGRRRLCK+
Sbjct: 1   MAEKKPLSLNDRHSRLLEDLSSHR----------QPPKPSQDPEQPRKVKLEGRRRLCKL 50

Query: 89  QSETLIEPSHDPTASPVPQIRDI 21
            S +      D T    P    I
Sbjct: 51  SSTS--RDDDDETVFDAPSFAGI 71


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