BLASTX nr result
ID: Cinnamomum25_contig00029947
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cinnamomum25_contig00029947 (909 letters) Database: ./nr 69,698,275 sequences; 24,982,196,650 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KEH40713.1| DUF4283 domain protein [Medicago truncatula] 43 1e-06 gb|KHN43790.1| Replication factor C subunit 3 [Glycine soja] 47 3e-06 gb|KHN05908.1| Transcription factor PIF1 [Glycine soja] 50 5e-06 >gb|KEH40713.1| DUF4283 domain protein [Medicago truncatula] Length = 576 Score = 43.1 bits (100), Expect(2) = 1e-06 Identities = 21/70 (30%), Positives = 35/70 (50%) Frame = +1 Query: 40 GIEGMKMAEPGGSQVLMTFADVAKALEIIKEYNFQFSEVFSSLERWLPGPNISIRRMWLR 219 G+ + + G + VL+ D E + + +F S++RW P R +W+R Sbjct: 140 GLNKIGVIPMGANMVLLKAEDPHLIEEAEGRSDPWWRGLFKSVKRWAPNLVSKQRLIWIR 199 Query: 220 CFGVPLHAWN 249 CFG+PLH W+ Sbjct: 200 CFGLPLHVWD 209 Score = 37.7 bits (86), Expect(2) = 1e-06 Identities = 20/62 (32%), Positives = 35/62 (56%) Frame = +2 Query: 254 KVFEAIGEQFGEVVGVAKETEERLVLEYGRVCVQIRHHQFLNQVVNLDVFGIVFPISVWE 433 K F+ +G FGE V +ET ++ GR+ V F+N+ + ++V G+VF + V E Sbjct: 211 KTFKKMGALFGEFVDFDEETIGLNRVDMGRIYVLSSSMAFVNEKLRVEVMGVVFDVWVVE 270 Query: 434 DL 439 ++ Sbjct: 271 EV 272 >gb|KHN43790.1| Replication factor C subunit 3 [Glycine soja] Length = 976 Score = 47.4 bits (111), Expect(2) = 3e-06 Identities = 20/60 (33%), Positives = 36/60 (60%) Frame = +1 Query: 70 GGSQVLMTFADVAKALEIIKEYNFQFSEVFSSLERWLPGPNISIRRMWLRCFGVPLHAWN 249 G VL+ + KA+++++E + + ++F SLE+W P R W+ C+G+PL AW+ Sbjct: 261 GDDMVLILGLNEEKAMKVMEEEDTGWGDLFISLEKWNPKLRPGYRLTWVHCWGIPLMAWD 320 Score = 32.0 bits (71), Expect(2) = 3e-06 Identities = 15/61 (24%), Positives = 30/61 (49%) Frame = +2 Query: 269 IGEQFGEVVGVAKETEERLVLEYGRVCVQIRHHQFLNQVVNLDVFGIVFPISVWEDLDVL 448 I GE+V + E+ L+ R+ ++ + VVN+ + G +F +++ E+ V Sbjct: 327 IVSSIGEMVEADDDVEDLRKLDMARILIKTPWKPLIQHVVNVQIEGEIFTVNIVEESGVS 386 Query: 449 C 451 C Sbjct: 387 C 387 >gb|KHN05908.1| Transcription factor PIF1 [Glycine soja] Length = 686 Score = 49.7 bits (117), Expect(2) = 5e-06 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +1 Query: 70 GGSQVLMTFADVAKALEIIKEYNFQFSEVFSSLERWLPGPNISIRRMWLRCFGVPLHAWN 249 G QVL+ A ++I N + +FSS+ERW P + R W++C+G+P+ AWN Sbjct: 265 GDDQVLLLGLSEYDANQLI---NGDRTFLFSSIERWHPNMRVDYRLTWIQCWGIPVQAWN 321 Query: 250 PE 255 P+ Sbjct: 322 PK 323 Score = 28.9 bits (63), Expect(2) = 5e-06 Identities = 22/86 (25%), Positives = 38/86 (44%) Frame = +2 Query: 251 PKVFEAIGEQFGEVVGVAKETEERLVLEYGRVCVQIRHHQFLNQVVNLDVFGIVFPISVW 430 PK F I GEVV + EE+ ++ R+ ++ + + V + + G F + + Sbjct: 322 PKHFNQIIAAMGEVVDIDDAVEEKRRVDKARLLIRTQWRPSIQHTVEVMIDGAKFMVHIN 381 Query: 431 EDLDVLCPLNHVSSIKGAGDGVLSEE 508 E+ C HV + AG+ S E Sbjct: 382 EE---SCQ-GHVGCSRRAGNAEGSSE 403